Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10h14
         (336 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   3.1  
DQ370041-1|ABD18602.1|   85|Anopheles gambiae putative salivary ...    22   5.4  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    22   7.1  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   7.1  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 76  DSIDMYRCKRETYSSEKHR 132
           DS ++YRC R   ++E+ R
Sbjct: 56  DSYNIYRCDRSRLNNERSR 74


>DQ370041-1|ABD18602.1|   85|Anopheles gambiae putative salivary
           secreted peptide withTIL domain protein.
          Length = 85

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +2

Query: 212 KPTRFVPINFPPCEEGLERDVTGTCREVWY 301
           KP +   ++   C++G  R+  G C   W+
Sbjct: 51  KPCKAACVDKCFCKDGFLRNENGKCVRAWH 80


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 331 FLDCLNFKCSVPHFPACSG 275
           + +C NF C  P    CSG
Sbjct: 587 YCECDNFSCDRPGGLLCSG 605


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -2

Query: 176  LRRSENQTHQVPWNARCFSDEYVSRLQRYM 87
            +RR E Q     W A   +D    R  RY+
Sbjct: 937  IRREERQRSMEEWQATWGADAANERASRYV 966


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 309,596
Number of Sequences: 2352
Number of extensions: 5978
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 23774685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)