Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10h08
         (618 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77493-1|AAB19224.1|  263|Homo sapiens Notch2 protein.                 30   7.5  
BC071562-1|AAH71562.2| 1235|Homo sapiens NOTCH2 protein protein.       30   7.5  
AL596222-1|CAH70182.1| 2471|Homo sapiens Notch homolog 2 (Drosop...    30   7.5  
AL512503-1|CAH72483.1| 2471|Homo sapiens Notch homolog 2 (Drosop...    30   7.5  
AL359752-4|CAI18974.1| 2471|Homo sapiens Notch homolog 2 (Drosop...    30   7.5  
AF315356-1|AAG37073.1| 2471|Homo sapiens NOTCH2 protein protein.       30   7.5  
AF308601-1|AAA36377.2| 2471|Homo sapiens NOTCH 2 protein.              30   7.5  

>U77493-1|AAB19224.1|  263|Homo sapiens Notch2 protein.
          Length = 263

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +2

Query: 221 RNPPKNSTKSTMMSSRVSVGCSCPSKWASKKVDAVDLGAHLKESLSSLMI 370
           R+P KN  K T +  + S  C CPS W     D  ++   +  S   +++
Sbjct: 103 RSPCKN--KGTCVQKKASPQCLCPSGWVGAYCDVPNVSCDIAASRRGVLV 150


>BC071562-1|AAH71562.2| 1235|Homo sapiens NOTCH2 protein protein.
          Length = 1235

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +2

Query: 221  RNPPKNSTKSTMMSSRVSVGCSCPSKWASKKVDAVDLGAHLKESLSSLMI 370
            R+P KN  K T +  +    C CPS WA    D  ++   +  S   +++
Sbjct: 1069 RSPCKN--KGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLV 1116


>AL596222-1|CAH70182.1| 2471|Homo sapiens Notch homolog 2 (Drosophila)
            protein.
          Length = 2471

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +2

Query: 221  RNPPKNSTKSTMMSSRVSVGCSCPSKWASKKVDAVDLGAHLKESLSSLMI 370
            R+P KN  K T +  +    C CPS WA    D  ++   +  S   +++
Sbjct: 1069 RSPCKN--KGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLV 1116


>AL512503-1|CAH72483.1| 2471|Homo sapiens Notch homolog 2 (Drosophila)
            protein.
          Length = 2471

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +2

Query: 221  RNPPKNSTKSTMMSSRVSVGCSCPSKWASKKVDAVDLGAHLKESLSSLMI 370
            R+P KN  K T +  +    C CPS WA    D  ++   +  S   +++
Sbjct: 1069 RSPCKN--KGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLV 1116


>AL359752-4|CAI18974.1| 2471|Homo sapiens Notch homolog 2 (Drosophila)
            protein.
          Length = 2471

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +2

Query: 221  RNPPKNSTKSTMMSSRVSVGCSCPSKWASKKVDAVDLGAHLKESLSSLMI 370
            R+P KN  K T +  +    C CPS WA    D  ++   +  S   +++
Sbjct: 1069 RSPCKN--KGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLV 1116


>AF315356-1|AAG37073.1| 2471|Homo sapiens NOTCH2 protein protein.
          Length = 2471

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +2

Query: 221  RNPPKNSTKSTMMSSRVSVGCSCPSKWASKKVDAVDLGAHLKESLSSLMI 370
            R+P KN  K T +  +    C CPS WA    D  ++   +  S   +++
Sbjct: 1069 RSPCKN--KGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLV 1116


>AF308601-1|AAA36377.2| 2471|Homo sapiens NOTCH 2 protein.
          Length = 2471

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +2

Query: 221  RNPPKNSTKSTMMSSRVSVGCSCPSKWASKKVDAVDLGAHLKESLSSLMI 370
            R+P KN  K T +  +    C CPS WA    D  ++   +  S   +++
Sbjct: 1069 RSPCKN--KGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLV 1116


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,141,295
Number of Sequences: 237096
Number of extensions: 1447465
Number of successful extensions: 2497
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2491
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)