Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10h08
         (618 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g01840.1 68416.m00125 protein kinase family protein contains ...    29   1.9  
At1g13750.1 68414.m01614 calcineurin-like phosphoesterase family...    28   4.3  
At3g49620.1 68416.m05423 2-oxoacid-dependent oxidase, putative (...    27   7.5  
At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family...    27   7.5  
At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family...    27   7.5  
At5g18220.1 68418.m02138 glycosyl hydrolase family 17 protein si...    27   10.0 

>At3g01840.1 68416.m00125 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 654

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = +2

Query: 185 LEGNSRDMT*KKRNPPKNSTK-STMMSSRVSVGCSCPSKWASKKVDAVDLGAHLKESLSS 361
           L+G +  ++ +++NP  +  K    +  R+++ CSCP +  S     V     +++S+SS
Sbjct: 128 LQGLTTCLSIREKNPHISEDKLGDNIKLRLAIRCSCPQEGVSNASFLVTYPVGVRDSVSS 187

Query: 362 LMI 370
           L +
Sbjct: 188 LAV 190


>At1g13750.1 68414.m01614 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 613

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = -1

Query: 618 IVLAFGMFSVSAAEFFAGRKASGNPVAATVFHKQEGLFPIDIAXYSSADNWTRFGKILQN 439
           I LA  +   S+  F+A   +   P+      K    + +DIA Y  A N+ R   + Q+
Sbjct: 454 IFLAHRVLGYSSTYFYAEEGSFAEPMGRESLQKLWQKYKVDIAIYGHAHNYERTCPVYQS 513


>At3g49620.1 68416.m05423 2-oxoacid-dependent oxidase, putative
           (DIN11) identical to partial cds of 2-oxoacid-dependent
           oxidase (din11) from GI:10834554 [Arabidopsis thaliana];
           identical to cDNA 2-oxoacid-dependent oxidase (din11)
           GI:10834553; contains Pfam profile PF03171:
           oxidoreductase, 2OG-Fe(II) oxygenase family
          Length = 357

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +1

Query: 505 EKAFLFVKNCGGDWIPTSFSAGKEFCCTNGE 597
           +K  L VKN  GDWIP     G  F C  G+
Sbjct: 245 DKTALQVKNVDGDWIPAIPIPG-SFICNIGD 274


>At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family
           protein similar to SP|P17213 Bactericidal
           permeability-increasing protein precursor (BPI) {Homo
           sapiens}; contains Pfam profile PF02886: LBP / BPI /
           CETP family, C-terminal domain
          Length = 515

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -1

Query: 486 YSSADNWTRFGKILQNYIKARTDTMLEA 403
           +++   W++ G+   NY++A T  +LEA
Sbjct: 440 FNATMKWSKIGEFQTNYVQAATSRILEA 467


>At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family
           protein similar to SP|P17213 Bactericidal
           permeability-increasing protein precursor (BPI) {Homo
           sapiens}; contains Pfam profile PF02886: LBP / BPI /
           CETP family, C-terminal domain
          Length = 722

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -1

Query: 486 YSSADNWTRFGKILQNYIKARTDTMLEA 403
           +++   W++ G+   NY++A T  +LEA
Sbjct: 647 FNATMKWSKIGEFQTNYVQAATSRILEA 674


>At5g18220.1 68418.m02138 glycosyl hydrolase family 17 protein
           similar to elicitor inducible chitinase Nt-SubE76
           GI:11071974 from [Nicotiana tabacum]
          Length = 488

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -1

Query: 507 FPIDIAXYSSADNWTRFGKILQNYIKARTDTMLEATRATG 388
           FP D A ++  +  +  G I  N   A  DT+L + +A G
Sbjct: 219 FPFDYAFFNGQNTVSDNGVIYTNVFDANFDTLLASLKALG 258


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,721,005
Number of Sequences: 28952
Number of extensions: 200033
Number of successful extensions: 485
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1246162608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)