Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10h07
         (597 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   2.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   2.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.9  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +3

Query: 453 SNCRWSPRSISSIK*GSNWYMCSASNWYTPLTVRQSRCCTTLHTXSFT 596
           +N + SP+S SS+  G+N +  + S  Y  L        T + + + T
Sbjct: 218 ANVKLSPKSASSLPPGNNIHGMAPSVMYPHLNRSSPTTATAIASATVT 265


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +3

Query: 453 SNCRWSPRSISSIK*GSNWYMCSASNWYTPLTVRQSRCCTTLHTXSFT 596
           +N + SP+S SS+  G+N +  + S  Y  L        T + + + T
Sbjct: 166 ANVKLSPKSASSLPPGNNIHGMAPSVMYPHLNRSSPTTATAIASATVT 213


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +3

Query: 453 SNCRWSPRSISSIK*GSNWYMCSASNWYTPLTVRQSRCCTTLHTXSFT 596
           +N + SP+S SS+  G+N +  + S  Y  L        T + + + T
Sbjct: 349 ANVKLSPKSASSLPPGNNIHGMAPSVMYPHLNRSSPTTATAIASATVT 396


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 295  RVACVFLQP*WHRRGAG 245
            +V C F    W+R+G G
Sbjct: 1824 KVVCYFTNWAWYRQGVG 1840


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,045
Number of Sequences: 336
Number of extensions: 3389
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)