Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10h07
         (597 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81107-6|CAB03230.1|  342|Caenorhabditis elegans Hypothetical pr...   164   5e-41
Z81553-6|CAB04495.1|  388|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z69790-4|CAA93655.1|  282|Caenorhabditis elegans Hypothetical pr...    28   4.4  
U88169-9|AAB42230.1|  417|Caenorhabditis elegans Phosphoglycerat...    27   7.7  

>Z81107-6|CAB03230.1|  342|Caenorhabditis elegans Hypothetical
           protein R07H5.8 protein.
          Length = 342

 Score =  164 bits (398), Expect = 5e-41
 Identities = 75/144 (52%), Positives = 98/144 (68%)
 Frame = +1

Query: 166 EGLLVGIGNPLLDISASVDEDLLKKYDLHPDDAIMAEEKHMPLYSELVDKYNAEYIAGGS 345
           E  L+G+ NPLLDI  +V++  L K+ L  +DAI+ ++KH  +++EL   +  EYI GG+
Sbjct: 6   ENTLIGMCNPLLDIQTTVEKAFLDKWGLKENDAILCDDKHNDMFTELTRDFKVEYIPGGA 65

Query: 346 VQNSLRVAQWILKKPNICTYFGCVGNDEYAKLLKERAIADGVHVQYQVSNEVATGTCAVL 525
            QNSLRVAQWIL  PN   +FG VG D+Y  LL  +A   GV+V YQ++  V TGTCA L
Sbjct: 66  AQNSLRVAQWILNAPNRTVFFGAVGKDQYGDLLASKAKEAGVNVHYQINETVKTGTCAAL 125

Query: 526 VTGTHRSLCANLGAAQHFTPXHLQ 597
           + GTHRSLCA+L AA  FT  HLQ
Sbjct: 126 INGTHRSLCAHLAAANTFTQDHLQ 149


>Z81553-6|CAB04495.1|  388|Caenorhabditis elegans Hypothetical
           protein F56H6.6 protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -3

Query: 385 SLESIVLLLMNSERFHQQYTLHYTCQRVPSRVACVFLQP 269
           +LE + +L    + F ++ T+HY  +  PS++ C  + P
Sbjct: 104 ALEYVAMLHQCDKEFGEKVTVHYVFRTSPSQMDCPVITP 142


>Z69790-4|CAA93655.1|  282|Caenorhabditis elegans Hypothetical
           protein F33C8.3 protein.
          Length = 282

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 24/101 (23%), Positives = 36/101 (35%), Gaps = 2/101 (1%)
 Frame = +1

Query: 229 LLKKYDLHPDDAIMAEEKHMPLYSELVDKYNAEYIAG-GSVQNSLRVAQWILKKPNIC-T 402
           L  ++D  P   +   E+        +  +      G G V +S       L  PN C  
Sbjct: 159 LSARWDAEPSTQLEVNEEDAGRIEHGIGAFGGNKGTGYGRVPSSCCNEHGKLSYPNNCGR 218

Query: 403 YFGCVGNDEYAKLLKERAIADGVHVQYQVSNEVATGTCAVL 525
            F     + YA+ +  R  AD V+     S  +  G C VL
Sbjct: 219 SFSQAPLNTYAQFINTRGCADAVYESVSSSLSLIVGVCVVL 259


>U88169-9|AAB42230.1|  417|Caenorhabditis elegans Phosphoglycerate
           kinase protein 1 protein.
          Length = 417

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/80 (23%), Positives = 35/80 (43%)
 Frame = +1

Query: 292 LYSELVDKYNAEYIAGGSVQNSLRVAQWILKKPNICTYFGCVGNDEYAKLLKERAIADGV 471
           L   L+DK N   I GG     L+VAQ +    ++    G    +E  +  K + +   +
Sbjct: 222 LIKNLLDKVNEMIIGGGMAYTFLKVAQGVKIGNSLYDEEGAKIVNELLEAAKAKGVQIHL 281

Query: 472 HVQYQVSNEVATGTCAVLVT 531
            V + ++++ A    +  VT
Sbjct: 282 PVDFVIADKFAEDATSKTVT 301


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,736,613
Number of Sequences: 27780
Number of extensions: 290601
Number of successful extensions: 778
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)