Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10h05
         (672 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54I18 Cluster: Suppressor of Mek1; n=2; Eukaryota|Rep:...    35   2.1  
UniRef50_Q8I5U4 Cluster: Putative uncharacterized protein; n=1; ...    33   6.3  

>UniRef50_Q54I18 Cluster: Suppressor of Mek1; n=2; Eukaryota|Rep:
           Suppressor of Mek1 - Dictyostelium discoideum (Slime
           mold)
          Length = 1046

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +1

Query: 529 DDKHDSDDIPSLIPISFTNFHESNLDSVDSCSSN 630
           DD  DSDD   LIPIS  N + +N ++   C++N
Sbjct: 678 DDSEDSDDEDELIPISINNNNNNNNNNKQICTNN 711


>UniRef50_Q8I5U4 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 438

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = +2

Query: 50  ILYLIETLKKLTTKNIDQHVKHNVLIISSEQFSDVNKQ*HVYNKKK*I-HQYLHSLCIDQ 226
           +LY+   L K +  N++QH   +++ IS+E+  ++ K+ + +   K   HQY  ++ +  
Sbjct: 234 LLYIQNILSKHSIGNLEQH---SIVNISNEKKINILKKKNFFKHSKLYRHQYYFNIKMKT 290

Query: 227 TSNLIMRKRKINLKE*RTPQKH 292
             N I+  +K N+K      KH
Sbjct: 291 IYNYIIAYKKKNIKNYINKDKH 312


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,820,355
Number of Sequences: 1657284
Number of extensions: 7179529
Number of successful extensions: 23070
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23030
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)