Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10h01
         (751 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_59530| Best HMM Match : NAC (HMM E-Value=4.6e-05)                   60   2e-09
SB_26449| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.25 
SB_57498| Best HMM Match : Gene66 (HMM E-Value=7.7)                    29   4.0  
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)                     28   7.0  
SB_146| Best HMM Match : DUF836 (HMM E-Value=1.5)                      28   9.3  

>SB_59530| Best HMM Match : NAC (HMM E-Value=4.6e-05)
          Length = 98

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 27/33 (81%), Positives = 28/33 (84%)
 Frame = +3

Query: 285 VNTIPGIEEVNMIKEDGTVIHFNNPKAQASLAA 383
           VN IPGIEEVNMIKEDGTVIHFNNPKA+    A
Sbjct: 54  VNPIPGIEEVNMIKEDGTVIHFNNPKAEMGSGA 86


>SB_26449| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 41

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = +3

Query: 522 EEDDEVPNLVGNFDEASK 575
           +EDDEVP LV NFDE SK
Sbjct: 10  DEDDEVPELVENFDEPSK 27


>SB_57498| Best HMM Match : Gene66 (HMM E-Value=7.7)
          Length = 335

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 124 NCVNVKTGHFFMTLFSYYKTRQYEFSM*LDRMH 26
           NC+    GH   T++ +Y   +YE SM + R H
Sbjct: 139 NCLWTLFGHTLRTVYRHYSDTRYELSMDVIRTH 171



 Score = 28.3 bits (60), Expect = 7.0
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 124 NCVNVKTGHFFMTLFSYYKTRQYEFSM*LDRMHVF*T 14
           NC+    GH   T++  Y   +YE SM + R H   T
Sbjct: 244 NCLWTLFGHTLRTVYGRYSDTRYELSMDVIRTHTLRT 280



 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 124 NCVNVKTGHFFMTLFSYYKTRQYEFSM*LDRMH 26
           NC+    GH   T++  Y   +YE SM + R H
Sbjct: 10  NCLWTLFGHTLRTVYGRYSDTRYELSMDVIRTH 42



 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 124 NCVNVKTGHFFMTLFSYYKTRQYEFSM*LDRMH 26
           NC+    GH   T++  Y   +YE SM + R H
Sbjct: 45  NCLWTLFGHTLRTVYGRYSDTRYELSMDVIRTH 77



 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 124 NCVNVKTGHFFMTLFSYYKTRQYEFSM*LDRMH 26
           NC+    GH   T++  Y   +YE SM + R H
Sbjct: 80  NCLWTLFGHTLRTVYGRYSDTRYELSMDVIRTH 112



 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 124 NCVNVKTGHFFMTLFSYYKTRQYEFSM*LDRMH 26
           NC+    GH   T++  Y   +YE SM + R H
Sbjct: 209 NCLWTLFGHTLRTVYGRYSDTRYELSMDVIRTH 241


>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
          Length = 1488

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = -2

Query: 213 CVSVCP-YRRCVLATGVSLIFRCSFCC 136
           C S+C  Y RCV+   V++   CS  C
Sbjct: 639 CTSICHRYGRCVMLANVTMFCNCSRAC 665


>SB_146| Best HMM Match : DUF836 (HMM E-Value=1.5)
          Length = 554

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 124 NCVNVKTGHFFMTLFSYYKTRQYEFSM*LDRMH 26
           NC+    GH   T++  Y   +YE SM + R H
Sbjct: 58  NCLWTLFGHTLRTVYGRYSDTRYELSMDVIRTH 90


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,654,777
Number of Sequences: 59808
Number of extensions: 397076
Number of successful extensions: 1082
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)