Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10g22
         (508 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L15188-7|AAA27951.1|  161|Caenorhabditis elegans Ribosomal prote...   183   8e-47
Z83244-6|CAD18877.1|  502|Caenorhabditis elegans Hypothetical pr...    33   0.090
Z83244-5|CAB54315.1|  568|Caenorhabditis elegans Hypothetical pr...    33   0.090
Z83244-4|CAB54314.1|  562|Caenorhabditis elegans Hypothetical pr...    33   0.090
Z49068-9|CAA88860.1|  556|Caenorhabditis elegans Hypothetical pr...    31   0.63 
AC084197-45|AAK68589.4|  751|Caenorhabditis elegans Hypothetical...    30   0.84 
Z92775-2|CAB07162.2|  382|Caenorhabditis elegans Hypothetical pr...    28   3.4  
Z92775-1|CAB07161.2|  379|Caenorhabditis elegans Hypothetical pr...    28   3.4  
Z46267-9|CAA86427.2|  889|Caenorhabditis elegans Hypothetical pr...    28   3.4  
Z81491-1|CAB04019.1|  181|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical pr...    27   5.9  
Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical pr...    27   5.9  
U64859-9|AAC69090.1|  378|Caenorhabditis elegans Activated in bl...    27   5.9  
U64859-8|AAC69096.1|  378|Caenorhabditis elegans Prion-like-(q/n...    27   5.9  
Z82261-7|CAH60757.2|  300|Caenorhabditis elegans Hypothetical pr...    27   7.8  

>L15188-7|AAA27951.1|  161|Caenorhabditis elegans Ribosomal protein,
           large subunitprotein 21 protein.
          Length = 161

 Score =  183 bits (445), Expect = 8e-47
 Identities = 85/126 (67%), Positives = 99/126 (78%)
 Frame = +2

Query: 44  MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 223
           MTNSKG RRGTR +FAR FR HG   LSTY   YK GD+VDI+ NGA QKGMP K YHG+
Sbjct: 1   MTNSKGLRRGTRYMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGR 60

Query: 224 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 403
           TGR++NVT  A+G+IVNKRVRG I+PKRINIR+EH+K SKCR DFL RVK N+   K AK
Sbjct: 61  TGRIFNVTRGAVGIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAAK 120

Query: 404 AAGKTV 421
           +AG+ V
Sbjct: 121 SAGQPV 126


>Z83244-6|CAD18877.1|  502|Caenorhabditis elegans Hypothetical
           protein W06F12.2c protein.
          Length = 502

 Score = 33.5 bits (73), Expect = 0.090
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = -2

Query: 228 PVFPWYTLCGIPF*TAPLPLMSTMSPTLYTFMYVESGIVPCVRNLR 91
           PVFP Y+  G+P    PLP     +P     M V+  + P V+NLR
Sbjct: 226 PVFPSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKVKNLR 271


>Z83244-5|CAB54315.1|  568|Caenorhabditis elegans Hypothetical
           protein W06F12.2b protein.
          Length = 568

 Score = 33.5 bits (73), Expect = 0.090
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = -2

Query: 228 PVFPWYTLCGIPF*TAPLPLMSTMSPTLYTFMYVESGIVPCVRNLR 91
           PVFP Y+  G+P    PLP     +P     M V+  + P V+NLR
Sbjct: 226 PVFPSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKVKNLR 271


>Z83244-4|CAB54314.1|  562|Caenorhabditis elegans Hypothetical
           protein W06F12.2a protein.
          Length = 562

 Score = 33.5 bits (73), Expect = 0.090
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = -2

Query: 228 PVFPWYTLCGIPF*TAPLPLMSTMSPTLYTFMYVESGIVPCVRNLR 91
           PVFP Y+  G+P    PLP     +P     M V+  + P V+NLR
Sbjct: 220 PVFPSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKVKNLR 265


>Z49068-9|CAA88860.1|  556|Caenorhabditis elegans Hypothetical
           protein K01C8.9 protein.
          Length = 556

 Score = 30.7 bits (66), Expect = 0.63
 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +2

Query: 362 KRVKE-NERLLKEAKAAGKTVNLKETASSP*SCPHRQ 469
           K+V++ N ++ KEAK  G T   ++T S P SCP ++
Sbjct: 23  KKVRDHNRKVKKEAKKNGTTNKKEKTISVPNSCPFKE 59


>AC084197-45|AAK68589.4|  751|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.1 protein.
          Length = 751

 Score = 30.3 bits (65), Expect = 0.84
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +1

Query: 145 QSWRHCRHQRQWCSSKGYATQSIPWKDRSRVQRDCSCSRCDCQQAC 282
           Q  RHC  Q   C S  Y      W+ RSRV    +C+  +  Q C
Sbjct: 366 QPVRHCSEQDATCDSPFYWCDMKLWRCRSRVVYGGNCTGYEGTQIC 411


>Z92775-2|CAB07162.2|  382|Caenorhabditis elegans Hypothetical
           protein C06H5.2 protein.
          Length = 382

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = -1

Query: 382 LILFDSLKEVLSALGVLDMLNTDIDALRYNPSANTLVDNHTESMSSHVVHAT 227
           LILFD+LK VL ++GVL   +  I+ L     A  L   +TE +    + ++
Sbjct: 200 LILFDALKNVLQSVGVLTTKSVLINWLPSVQIAEILEHFNTEILEDLTIKSS 251


>Z92775-1|CAB07161.2|  379|Caenorhabditis elegans Hypothetical
           protein C06H5.1 protein.
          Length = 379

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = -1

Query: 382 LILFDSLKEVLSALGVLDMLNTDIDALRYNPSANTLVDNHTESMSSHVVHAT 227
           LILFD+LK VL ++GVL   +  I+ L     A  L   +TE +    + ++
Sbjct: 200 LILFDALKNVLQSVGVLTTKSVLINWLPSVQIAEILEHFNTEILEDLTIKSS 251


>Z46267-9|CAA86427.2|  889|Caenorhabditis elegans Hypothetical
           protein F49E2.5d protein.
          Length = 889

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 18/63 (28%), Positives = 34/63 (53%)
 Frame = +3

Query: 315 SVLSMSSTPSADKTSLRESKRMRGY*RKPRLPARPST*KRQPAPPKAAHIVSGTEKPVLL 494
           +V+  S+TP A +   +++K+ +      ++  +P   +  PAPP+   +V   EKPV  
Sbjct: 363 NVVEKSTTPPATENK-KKNKKDKKKSESEKVTEQPV--ESAPAPPQVEQVVEKVEKPV-- 417

Query: 495 API 503
           AP+
Sbjct: 418 APV 420


>Z81491-1|CAB04019.1|  181|Caenorhabditis elegans Hypothetical
           protein D1086.1 protein.
          Length = 181

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +1

Query: 202 TQSIPW--KDRSRVQRDCSCSRCDCQQACSRKDYTEA 306
           T+ + W   D+SR+  D  C++   ++ C  KD+ +A
Sbjct: 120 TECVQWYFSDKSRMSTDQKCAQFKAKKQCIEKDFGKA 156


>Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical
           protein AC3.4 protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +1

Query: 238 QRDCSCS-RCDCQQACSRKDYTEAHQYPC*ACQ 333
           ++ C C+ R     +C R  YT+  QY C +CQ
Sbjct: 26  RQSCGCAPRVQPSCSCQRTTYTQPQQYSC-SCQ 57


>Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical
           protein AC3.3 protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +1

Query: 238 QRDCSCS-RCDCQQACSRKDYTEAHQYPC*ACQ 333
           ++ C C+ R     +C R  YT+  QY C +CQ
Sbjct: 26  RQSCGCAPRVQPSCSCQRTTYTQPQQYSC-SCQ 57


>U64859-9|AAC69090.1|  378|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 9 protein.
          Length = 378

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 19/62 (30%), Positives = 24/62 (38%)
 Frame = +1

Query: 238 QRDCSCSRCDCQQACSRKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQGCRQD 417
           Q  CSC +    Q+CS +      Q P  +C   Q Q     + Q    A    Q CRQ 
Sbjct: 34  QSQCSCQQVQQTQSCSCQSAPVQQQAP--SCSCAQPQQTQTVQVQSTQCAPACQQSCRQQ 91

Query: 418 RQ 423
            Q
Sbjct: 92  CQ 93


>U64859-8|AAC69096.1|  378|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 57
           protein.
          Length = 378

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 19/62 (30%), Positives = 24/62 (38%)
 Frame = +1

Query: 238 QRDCSCSRCDCQQACSRKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQGCRQD 417
           Q  CSC +    Q+CS +      Q P  +C   Q Q     + Q    A    Q CRQ 
Sbjct: 34  QSQCSCQQVQQTQSCSCQSAPVQQQAP--SCSCAQPQQTQTVQVQSTQCAPACQQSCRQQ 91

Query: 418 RQ 423
            Q
Sbjct: 92  CQ 93


>Z82261-7|CAH60757.2|  300|Caenorhabditis elegans Hypothetical
           protein C35D6.10 protein.
          Length = 300

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -1

Query: 445 GAGCLFQVDGLAGSLGFLQ*PLILFDSLKEVLSALGVLDMLN 320
           G GC    D    +LG++Q  ++   ++  VLS+L  L +LN
Sbjct: 160 GIGCTVDKDMQPSALGYIQAIILFCMAMSSVLSSLLHLSILN 201


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,399,265
Number of Sequences: 27780
Number of extensions: 236943
Number of successful extensions: 896
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)