Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10g20
         (558 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0559 + 4151054-4151178,4151306-4153018,4153121-4153412,415...    32   0.27 
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132     29   1.9  
08_01_0074 + 530207-532603                                             28   4.4  
08_01_0054 - 367770-370166                                             28   4.4  
03_06_0495 + 34323082-34323173,34323600-34323742,34324265-343243...    28   5.8  

>07_01_0559 +
           4151054-4151178,4151306-4153018,4153121-4153412,
           4154327-4154636,4155041-4155261
          Length = 886

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 20/67 (29%), Positives = 34/67 (50%)
 Frame = +1

Query: 268 LYDSGSCLEVEEYCRDSLLKGLSFKAVEPKGKIIGTMINGICPLXXXXXXNSLLNQALRC 447
           LYD+G C E  +   +S+    SF+A   K  ++    +G+ P        SLL  AL+C
Sbjct: 645 LYDTGHCEEALQKAEESISIQRSFEAFFLKAYVLAD--SGVDPSYSATVI-SLLEDALKC 701

Query: 448 PNPKFQR 468
           P+ + ++
Sbjct: 702 PSDRLRK 708


>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
          Length = 5436

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = +1

Query: 181  PITANDEE-EIMDLLKRTFFIDEPLNEAVGLYDSGSCLEVEEYCRDSLLKGLSFKAVEPK 357
            P T+ D+  E  DL   TF+I+EP  EA    ++   + VE    +SL+K LS + +E +
Sbjct: 1588 PSTSTDDVVEAADLQDETFYIEEP-KEAKLADENNKMVTVE---MESLVKNLSLELLESE 1643

Query: 358  GKII 369
              ++
Sbjct: 1644 KNVM 1647


>08_01_0074 + 530207-532603
          Length = 798

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
 Frame = +1

Query: 280 GSCLEVEEYCRDSLLKGLSFKAVEPKGKIIGTMINGICPLXXXXXXNSLLNQ-ALRCPNP 456
           G CL+ +      LL+G+    V+P      T+ING C         SL  Q A +  NP
Sbjct: 495 GYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNP 554

Query: 457 K---FQRILHIL--ARREEGAK 507
               +  ILH L   RR   AK
Sbjct: 555 GIVIYSTILHGLFQTRRIAAAK 576


>08_01_0054 - 367770-370166
          Length = 798

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
 Frame = +1

Query: 280 GSCLEVEEYCRDSLLKGLSFKAVEPKGKIIGTMINGICPLXXXXXXNSLLNQ-ALRCPNP 456
           G CL  +      LL+G+    V+P      TMING C         SL  Q A +  NP
Sbjct: 527 GYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNP 586

Query: 457 ---KFQRILHIL--ARREEGAK 507
               +  IL  L  ARR   AK
Sbjct: 587 GIVTYSTILQGLFQARRTAAAK 608


>03_06_0495 +
           34323082-34323173,34323600-34323742,34324265-34324315,
           34324405-34324626,34324731-34324833,34325156-34325552,
           34326564-34326735,34326995-34327089,34327246-34327455
          Length = 494

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +2

Query: 326 KDCLSKPSSLREKSLV 373
           K+C ++PSSLREK LV
Sbjct: 307 KECYNEPSSLREKGLV 322


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,239,999
Number of Sequences: 37544
Number of extensions: 277749
Number of successful extensions: 510
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1269546012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)