Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10g20
         (558 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   1.3  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    24   3.9  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   5.1  
AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    23   6.8  
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    23   6.8  
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    23   6.8  
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    23   6.8  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
 Frame = -3

Query: 325 SVANP--CNIPLP-LDMSRNHITLLP 257
           SVA P  C + L  LD+SRNH  LLP
Sbjct: 236 SVAPPVSCALDLEDLDVSRNHFVLLP 261


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -2

Query: 377 MVPMIFPLGSTALKDNPFSSESLQYSSTSRHEPESYN 267
           ++ +IF     A+  NP  +  LQ+ +TS    +  N
Sbjct: 20  LISLIFVFLDDAIVANPLKNRCLQFGTTSTTNTQQQN 56


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 237 EECSFK*VHYFLLIVSSNRKDSK 169
           +ECS K VH+ L  +  N K++K
Sbjct: 224 QECSEKQVHFQLFKLYHNEKEAK 246


>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +1

Query: 433 QALRCPNPKFQRILHILARREEGAKLAEKFP 525
           + L+ PNP +  + H+++    G     +FP
Sbjct: 109 RTLKVPNPSYGDLNHLVSLTMSGVTTCLRFP 139


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +1

Query: 433 QALRCPNPKFQRILHILARREEGAKLAEKFP 525
           + L+ PNP +  + H+++    G     +FP
Sbjct: 109 RTLKVPNPSYGDLNHLVSLTMSGVTTCLRFP 139


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +1

Query: 433 QALRCPNPKFQRILHILARREEGAKLAEKFP 525
           + L+ PNP +  + H+++    G     +FP
Sbjct: 109 RTLKVPNPSYGDLNHLVSLTMSGVTTCLRFP 139


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +1

Query: 433 QALRCPNPKFQRILHILARREEGAKLAEKFP 525
           + L+ PNP +  + H+++    G     +FP
Sbjct: 109 RTLKVPNPSYGDLNHLVSLTMSGVTTCLRFP 139


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,324
Number of Sequences: 2352
Number of extensions: 11108
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)