Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10g20
(558 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF022983-4|AAB69944.1| 387|Caenorhabditis elegans Hypothetical ... 31 0.74
Z68337-5|CAA92743.1| 230|Caenorhabditis elegans Hypothetical pr... 30 1.3
AL132865-7|CAB60598.1| 234|Caenorhabditis elegans Hypothetical ... 28 4.0
Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical pr... 28 5.2
U63744-1|AAC47308.1| 572|Caenorhabditis elegans p21-activated k... 28 5.2
U29612-11|AAO61438.1| 523|Caenorhabditis elegans P21-activated ... 28 5.2
U29612-10|AAA68805.2| 572|Caenorhabditis elegans P21-activated ... 28 5.2
U29612-9|AAL65775.1| 569|Caenorhabditis elegans P21-activated k... 28 5.2
D83215-1|BAA11844.1| 569|Caenorhabditis elegans protein kinase ... 28 5.2
AC024775-7|AAK68451.1| 251|Caenorhabditis elegans Hypothetical ... 27 9.1
>AF022983-4|AAB69944.1| 387|Caenorhabditis elegans Hypothetical
protein R13D11.4 protein.
Length = 387
Score = 30.7 bits (66), Expect = 0.74
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +1
Query: 130 FCD**IIMSKETTFTVLPITANDEEEIMDLLKRTFFIDEPLNEAVGLYDSGSCLEVEEYC 309
F D + E + + +T + E+ + L F ++EP+N A+G+ V++
Sbjct: 243 FPDADFLKMSEDNYEFVQLTNENSSELSEFLMSHFLLEEPMNRAIGMSRENFQPFVDKLF 302
Query: 310 RDSLLKGLSFKAVE 351
+L SF VE
Sbjct: 303 ERTLNIPFSFALVE 316
>Z68337-5|CAA92743.1| 230|Caenorhabditis elegans Hypothetical
protein M7.8 protein.
Length = 230
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Frame = +1
Query: 184 ITANDEE-EIMDLLKRTFFIDEPLNEAVGLYDSGSCLEVEEYCRDSLLKGLSFKA----- 345
+ N+E+ E++ L +F +DEPLN A + SC E+E+ +L + L ++
Sbjct: 16 VLRNEEKSEMLKFLLESFRVDEPLNRASKI----SCEEIEKCLDGALDRALKTESSILAR 71
Query: 346 VEPKGKIIGTMINGI 390
+ +I+G M+N +
Sbjct: 72 SQDTHEIVGCMLNSV 86
>AL132865-7|CAB60598.1| 234|Caenorhabditis elegans Hypothetical
protein Y62E10A.10 protein.
Length = 234
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 213 HYFLLIVSSNRKDSKSRFFGHNYLLIAKAVIAFGRFLPK 97
HY L++ + +K YLL A+ + GRFLPK
Sbjct: 30 HYVSLLLMNKKKVELENIADGQYLLRARLLRENGRFLPK 68
>Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical
protein F43D9.1 protein.
Length = 1226
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 395 GHIPLIMVPMIFPLGSTALKDNPFSSESLQYSSTSRHEPESYNPT 261
G P + P + P S+A ++ P +S + YSSTS + PT
Sbjct: 31 GSAPTVPPPAVPPPESSADEEEPRASSNNNYSSTSTVAAPTREPT 75
>Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical
protein F43D9.1 protein.
Length = 1226
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 395 GHIPLIMVPMIFPLGSTALKDNPFSSESLQYSSTSRHEPESYNPT 261
G P + P + P S+A ++ P +S + YSSTS + PT
Sbjct: 31 GSAPTVPPPAVPPPESSADEEEPRASSNNNYSSTSTVAAPTREPT 75
>U63744-1|AAC47308.1| 572|Caenorhabditis elegans p21-activated
kinase CePAK protein.
Length = 572
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -2
Query: 350 STALKDNPFSSESLQYSSTSRHEPESYNPTASFKGSSMKN 231
S LK P+S+ SL Y +P NP + S+ N
Sbjct: 150 SYGLKPQPYSTSSLPYHGNKIQDPRKMNPMTTSTSSAGYN 189
>U29612-11|AAO61438.1| 523|Caenorhabditis elegans P21-activated
kinase family protein1, isoform c protein.
Length = 523
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -2
Query: 350 STALKDNPFSSESLQYSSTSRHEPESYNPTASFKGSSMKN 231
S LK P+S+ SL Y +P NP + S+ N
Sbjct: 101 SYGLKPQPYSTSSLPYHGNKIQDPRKMNPMTTSTSSAGYN 140
>U29612-10|AAA68805.2| 572|Caenorhabditis elegans P21-activated
kinase family protein1, isoform a protein.
Length = 572
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -2
Query: 350 STALKDNPFSSESLQYSSTSRHEPESYNPTASFKGSSMKN 231
S LK P+S+ SL Y +P NP + S+ N
Sbjct: 150 SYGLKPQPYSTSSLPYHGNKIQDPRKMNPMTTSTSSAGYN 189
>U29612-9|AAL65775.1| 569|Caenorhabditis elegans P21-activated
kinase family protein1, isoform b protein.
Length = 569
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -2
Query: 350 STALKDNPFSSESLQYSSTSRHEPESYNPTASFKGSSMKN 231
S LK P+S+ SL Y +P NP + S+ N
Sbjct: 147 SYGLKPQPYSTSSLPYHGNKIQDPRKMNPMTTSTSSAGYN 186
>D83215-1|BAA11844.1| 569|Caenorhabditis elegans protein kinase
protein.
Length = 569
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -2
Query: 350 STALKDNPFSSESLQYSSTSRHEPESYNPTASFKGSSMKN 231
S LK P+S+ SL Y +P NP + S+ N
Sbjct: 147 SYGLKPQPYSTSSLPYHGNKIQDPRKMNPMTTSTSSAGYN 186
>AC024775-7|AAK68451.1| 251|Caenorhabditis elegans Hypothetical
protein Y41D4A.1 protein.
Length = 251
Score = 27.1 bits (57), Expect = 9.1
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +1
Query: 259 AVGLYD-SGSCLEVEEYCRDSLLKGLSFKAVEPKGKIIGTMINGICPLXXXXXXNSLLNQ 435
A+G D SG C + + C + ++ P G+ GT NGICP N N
Sbjct: 167 ALGSCDMSGRCSALSQICTST-----NYCCECPYGQAYGTCGNGICPNGFSCQANG--NC 219
Query: 436 ALRCPN 453
CPN
Sbjct: 220 CPSCPN 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,639,799
Number of Sequences: 27780
Number of extensions: 253990
Number of successful extensions: 596
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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