Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10g19
(564 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81098-5|CAB97235.1| 330|Caenorhabditis elegans Hypothetical pr... 75 3e-14
Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical pr... 33 0.19
X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic int... 33 0.19
Z73906-11|CAD36485.1| 136|Caenorhabditis elegans Hypothetical p... 31 0.76
U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical p... 31 0.76
Z54306-3|CAE17716.1| 165|Caenorhabditis elegans Hypothetical pr... 30 1.3
U97552-6|AAX55683.1| 216|Caenorhabditis elegans Hypothetical pr... 30 1.3
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 29 1.7
U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like pr... 24 2.0
U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like pr... 24 2.0
U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like pr... 24 2.0
AB023496-1|BAA97564.1| 793|Caenorhabditis elegans kinesin like ... 24 2.1
U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonin... 29 2.3
U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase ... 29 2.3
U11280-4|AAM97951.2| 353|Caenorhabditis elegans Protein kinase ... 29 2.3
AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily a... 29 2.3
AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily a... 29 2.3
AF067215-1|AAC17011.1| 495|Caenorhabditis elegans Hypothetical ... 29 3.1
U28735-1|AAG38886.2| 272|Caenorhabditis elegans Hypothetical pr... 28 4.0
AL032631-9|CAA21575.2| 893|Caenorhabditis elegans Hypothetical ... 28 4.0
AF024498-11|AAF39802.1| 310|Caenorhabditis elegans Serpentine r... 27 9.3
>Z81098-5|CAB97235.1| 330|Caenorhabditis elegans Hypothetical
protein K07A12.7 protein.
Length = 330
Score = 75.4 bits (177), Expect = 3e-14
Identities = 49/132 (37%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Frame = +1
Query: 184 GLPPIPENSIADIYALSEEIKDAPESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDE 363
GLP I ++ Y + + +APESVKKIFSV +KE K+ L+ V++H DE
Sbjct: 86 GLPRIEKSKTRAKYEDLDVLSNAPESVKKIFSVEMATRKELSQEWKQSLIKSVRQHSLDE 145
Query: 364 NSAENKIARLTAYIRCIQNIMEKNPRNSKMKQT-----VQEMIDRRKKLLKYLRQYDYKK 528
NS E KIA LTA IR ++ + +K K T + +I+ R+K L+ LR+ +
Sbjct: 146 NSLEMKIAWLTALIRHWSLLVNDIGQETKKKPTWLTHRIWLVINERRKALRILRERNETA 205
Query: 529 FEWLLXKLNIEY 564
FE + L I Y
Sbjct: 206 FEKTIAALKISY 217
>Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 32.7 bits (71), Expect = 0.19
Identities = 20/93 (21%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +1
Query: 199 PENSIADIYALSEEIKDAPESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAEN 378
PEN LS I+D E ++ +V + ++ L +E+ + R ++ A+
Sbjct: 258 PENREFFKNELSSAIRDIREEYDQVNNVHRNDMESWYRLKVQEIQTQSARQNMEQGYAKE 317
Query: 379 KIARLTAYIRCIQ-NIMEKNPRNSKMKQTVQEM 474
++ RL + ++ + + RNS +++ +QE+
Sbjct: 318 EVKRLRTQLSDLRGKLADLESRNSLLEKQIQEL 350
>Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 32.7 bits (71), Expect = 0.19
Identities = 20/93 (21%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +1
Query: 199 PENSIADIYALSEEIKDAPESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAEN 378
PEN LS I+D E ++ +V + ++ L +E+ + R ++ A+
Sbjct: 266 PENREFFKNELSSAIRDIREEYDQVNNVHRNDMESWYRLKVQEIQTQSARQNMEQGYAKE 325
Query: 379 KIARLTAYIRCIQ-NIMEKNPRNSKMKQTVQEM 474
++ RL + ++ + + RNS +++ +QE+
Sbjct: 326 EVKRLRTQLSDLRGKLADLESRNSLLEKQIQEL 358
>Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 32.7 bits (71), Expect = 0.19
Identities = 20/93 (21%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +1
Query: 199 PENSIADIYALSEEIKDAPESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAEN 378
PEN LS I+D E ++ +V + ++ L +E+ + R ++ A+
Sbjct: 266 PENREFFKNELSSAIRDIREEYDQVNNVHRNDMESWYRLKVQEIQTQSARQNMEQGYAKE 325
Query: 379 KIARLTAYIRCIQ-NIMEKNPRNSKMKQTVQEM 474
++ RL + ++ + + RNS +++ +QE+
Sbjct: 326 EVKRLRTQLSDLRGKLADLESRNSLLEKQIQEL 358
>Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 32.7 bits (71), Expect = 0.19
Identities = 20/93 (21%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +1
Query: 199 PENSIADIYALSEEIKDAPESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAEN 378
PEN LS I+D E ++ +V + ++ L +E+ + R ++ A+
Sbjct: 258 PENREFFKNELSSAIRDIREEYDQVNNVHRNDMESWYRLKVQEIQTQSARQNMEQGYAKE 317
Query: 379 KIARLTAYIRCIQ-NIMEKNPRNSKMKQTVQEM 474
++ RL + ++ + + RNS +++ +QE+
Sbjct: 318 EVKRLRTQLSDLRGKLADLESRNSLLEKQIQEL 350
>Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 32.7 bits (71), Expect = 0.19
Identities = 20/93 (21%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +1
Query: 199 PENSIADIYALSEEIKDAPESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAEN 378
PEN LS I+D E ++ +V + ++ L +E+ + R ++ A+
Sbjct: 266 PENREFFKNELSSAIRDIREEYDQVNNVHRNDMESWYRLKVQEIQTQSARQNMEQGYAKE 325
Query: 379 KIARLTAYIRCIQ-NIMEKNPRNSKMKQTVQEM 474
++ RL + ++ + + RNS +++ +QE+
Sbjct: 326 EVKRLRTQLSDLRGKLADLESRNSLLEKQIQEL 358
>Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 32.7 bits (71), Expect = 0.19
Identities = 20/93 (21%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +1
Query: 199 PENSIADIYALSEEIKDAPESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAEN 378
PEN LS I+D E ++ +V + ++ L +E+ + R ++ A+
Sbjct: 266 PENREFFKNELSSAIRDIREEYDQVNNVHRNDMESWYRLKVQEIQTQSARQNMEQGYAKE 325
Query: 379 KIARLTAYIRCIQ-NIMEKNPRNSKMKQTVQEM 474
++ RL + ++ + + RNS +++ +QE+
Sbjct: 326 EVKRLRTQLSDLRGKLADLESRNSLLEKQIQEL 358
>X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 592
Score = 32.7 bits (71), Expect = 0.19
Identities = 20/93 (21%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +1
Query: 199 PENSIADIYALSEEIKDAPESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAEN 378
PEN LS I+D E ++ +V + ++ L +E+ + R ++ A+
Sbjct: 285 PENREFFKNELSSAIRDIREEYDQVNNVHRNDMESWYRLKVQEIQTQSARQNMEQGYAKE 344
Query: 379 KIARLTAYIRCIQ-NIMEKNPRNSKMKQTVQEM 474
++ RL + ++ + + RNS +++ +QE+
Sbjct: 345 EVKRLRTQLSDLRGKLADLESRNSLLEKQIQEL 377
>Z73906-11|CAD36485.1| 136|Caenorhabditis elegans Hypothetical
protein D2030.11 protein.
Length = 136
Score = 30.7 bits (66), Expect = 0.76
Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Frame = +1
Query: 211 IADIYALSEEIKDAPESVKKIFSVAHLGQK-----EFHTLVKKELVNRVKRHQYDENSAE 375
+ DI+ + EIK+ + K + +G K EFH + ++ V+R + +
Sbjct: 9 VQDIHKIDSEIKELKSAEKAVQRCEKMGLKVSHNEEFHEKLSVKMDEAVQRKM---SKLD 65
Query: 376 NKIARLTAYIRCIQNIMEKNPRNSKMKQTVQEMIDRRKKLLK-YLR 510
K +L RC+ ++ + P + ++ E++ + LK +LR
Sbjct: 66 EKSEQLDKIFRCLMSMSSEAPTSQNFEED-SELVSQHLSALKAFLR 110
>U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical
protein T08A9.1 protein.
Length = 1330
Score = 30.7 bits (66), Expect = 0.76
Identities = 19/65 (29%), Positives = 37/65 (56%)
Frame = +1
Query: 349 HQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKQTVQEMIDRRKKLLKYLRQYDYKK 528
+++ + SAE+ + L+ + +++ ++ R SKM+ V M R +KL KYL Q +
Sbjct: 695 YEHIDYSAEDILLGLSDHTVQLEDAVK---RLSKMQNIVANMTPRNEKLFKYLHQTAPRD 751
Query: 529 FEWLL 543
FE ++
Sbjct: 752 FEIII 756
>Z54306-3|CAE17716.1| 165|Caenorhabditis elegans Hypothetical
protein B0457.6 protein.
Length = 165
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 64 LRRFACSAIQ-SRGLKHQV-NIKWVRPEYVPAYKPEKSGDLEGLPPIPE 204
LR+F S + SRG V K P + + P+ S D GLPPIPE
Sbjct: 94 LRQFFPSTPRLSRGFSDPVVRRKSSLPTILSCHSPDHSDDFLGLPPIPE 142
>U97552-6|AAX55683.1| 216|Caenorhabditis elegans Hypothetical
protein W05H7.4c protein.
Length = 216
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -2
Query: 488 FLRSIISCTVCFIF--EFLGFFSIMFCIQRMYAVNLAILFS 372
F S ISC+ CF + +F FFSI C++ +A L+ +++
Sbjct: 159 FSDSPISCSPCFFYVSDFF-FFSIFLCVRSFFADALSFIWN 198
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical
protein C34F11.5 protein.
Length = 894
Score = 29.5 bits (63), Expect = 1.7
Identities = 28/102 (27%), Positives = 45/102 (44%)
Frame = +1
Query: 256 ESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKN 435
+ +KK+ L +KE +K + K+ + + E K RL A R + IM K
Sbjct: 668 KKLKKVDGKKVLKRKEIVLTLKVRKASTAKKTK--KAMQEKKRKRLRAKRRLRRFIMRKR 725
Query: 436 PRNSKMKQTVQEMIDRRKKLLKYLRQYDYKKFEWLLXKLNIE 561
+ K+ RR+K KY +Y KK++ LN+E
Sbjct: 726 LKKKLRKR--YRGAKRRRKRQKYRLRYRKKKYQLRKGALNME 765
>U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like
protein protein 4,isoform b protein.
Length = 1610
Score = 23.8 bits (49), Expect(2) = 2.0
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 409 NECMQLILQSYFQLSFHH 356
NEC L++ +F+ HH
Sbjct: 852 NECSSLVIDPFFESQEHH 869
Score = 23.8 bits (49), Expect(2) = 2.0
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -3
Query: 268 FLPILEHP*FLRLKHRYQR*NSQEWVVSLLNHQIFQVCTQAHIQD 134
FL +L H LRL ++ + Q V L+ QIF+V TQ + +
Sbjct: 878 FLEVLFHD--LRLDYQVPIISQQGEVAGRLHVQIFRVVTQEEMDE 920
>U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like
protein protein 4,isoform a protein.
Length = 1595
Score = 23.8 bits (49), Expect(2) = 2.0
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 409 NECMQLILQSYFQLSFHH 356
NEC L++ +F+ HH
Sbjct: 852 NECSSLVIDPFFESQEHH 869
Score = 23.8 bits (49), Expect(2) = 2.0
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -3
Query: 268 FLPILEHP*FLRLKHRYQR*NSQEWVVSLLNHQIFQVCTQAHIQD 134
FL +L H LRL ++ + Q V L+ QIF+V TQ + +
Sbjct: 878 FLEVLFHD--LRLDYQVPIISQQGEVAGRLHVQIFRVVTQEEMDE 920
>U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like
protein protein 4,isoform c protein.
Length = 1576
Score = 23.8 bits (49), Expect(2) = 2.0
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 409 NECMQLILQSYFQLSFHH 356
NEC L++ +F+ HH
Sbjct: 852 NECSSLVIDPFFESQEHH 869
Score = 23.8 bits (49), Expect(2) = 2.0
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -3
Query: 268 FLPILEHP*FLRLKHRYQR*NSQEWVVSLLNHQIFQVCTQAHIQD 134
FL +L H LRL ++ + Q V L+ QIF+V TQ + +
Sbjct: 878 FLEVLFHD--LRLDYQVPIISQQGEVAGRLHVQIFRVVTQEEMDE 920
>AB023496-1|BAA97564.1| 793|Caenorhabditis elegans kinesin like
protein KLP-4 protein.
Length = 793
Score = 23.8 bits (49), Expect(2) = 2.1
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 409 NECMQLILQSYFQLSFHH 356
NEC L++ +F+ HH
Sbjct: 272 NECSSLVIDPFFESQEHH 289
Score = 23.8 bits (49), Expect(2) = 2.1
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -3
Query: 268 FLPILEHP*FLRLKHRYQR*NSQEWVVSLLNHQIFQVCTQAHIQD 134
FL +L H LRL ++ + Q V L+ QIF+V TQ + +
Sbjct: 298 FLEVLFHD--LRLDYQVPIISQQGEVAGRLHVQIFRVVTQEEMDE 340
>U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonine
kinase protein.
Length = 982
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 439 RNSKMKQTVQEMIDRRKKLLKYLRQYDYKKFEWLL 543
+ S+ T+QE+I R K ++ L + YKK L+
Sbjct: 290 QRSRPSDTIQELIQRTKNMVLELDNFQYKKMRKLM 324
>U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase
protein 18, isoforma protein.
Length = 982
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 439 RNSKMKQTVQEMIDRRKKLLKYLRQYDYKKFEWLL 543
+ S+ T+QE+I R K ++ L + YKK L+
Sbjct: 290 QRSRPSDTIQELIQRTKNMVLELDNFQYKKMRKLM 324
>U11280-4|AAM97951.2| 353|Caenorhabditis elegans Protein kinase
protein 18, isoformb protein.
Length = 353
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 439 RNSKMKQTVQEMIDRRKKLLKYLRQYDYKKFEWLL 543
+ S+ T+QE+I R K ++ L + YKK L+
Sbjct: 290 QRSRPSDTIQELIQRTKNMVLELDNFQYKKMRKLM 324
>AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform b protein.
Length = 765
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +1
Query: 319 KKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKQTVQEMIDRRKKLL 498
KK R+ +++D + +NK+A R + N++ P N T+ +I RR++
Sbjct: 503 KKAASARLYGYEFDSDDEDNKMALTYEEKRNLSNLINNLPNN--QLNTIISIIQRRERSA 560
Query: 499 KYLRQYDYKKFE 534
+Q D + E
Sbjct: 561 LMQQQLDDSEVE 572
>AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform a protein.
Length = 851
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +1
Query: 319 KKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKQTVQEMIDRRKKLL 498
KK R+ +++D + +NK+A R + N++ P N T+ +I RR++
Sbjct: 503 KKAASARLYGYEFDSDDEDNKMALTYEEKRNLSNLINNLPNN--QLNTIISIIQRRERSA 560
Query: 499 KYLRQYDYKKFE 534
+Q D + E
Sbjct: 561 LMQQQLDDSEVE 572
>AF067215-1|AAC17011.1| 495|Caenorhabditis elegans Hypothetical
protein ZK380.2 protein.
Length = 495
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +1
Query: 118 NIKWVRPEYVPAYKPEKSGDLEGLPPIPENSIADIYALSEEIKDAPESVKKIFSVAHL 291
+IKW YVP Y E+S LE + + ++ + EEI ++ H+
Sbjct: 91 SIKWFMQTYVPNYSQEQSELLEQIIKNVDEAVKGLMKKDEEIAGLKAQLQAAVQAEHV 148
>U28735-1|AAG38886.2| 272|Caenorhabditis elegans Hypothetical
protein F48E3.9 protein.
Length = 272
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/104 (18%), Positives = 47/104 (45%)
Frame = +1
Query: 217 DIYALSEEIKDAPESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLT 396
++ + E+K + + + S + + E L K+L N+ + H Y + + E ++ ++
Sbjct: 67 EVSSKDNELKSMNDDILYLKSQLLIVESESRELKAKDLENQERIHAYIQQTREYELTQIN 126
Query: 397 AYIRCIQNIMEKNPRNSKMKQTVQEMIDRRKKLLKYLRQYDYKK 528
+ I ++E+N K V + R + + +Q + K+
Sbjct: 127 DK-KLIDKVIEENSSLIKENAKVSTKLSRLESVDYTYKQRELKE 169
>AL032631-9|CAA21575.2| 893|Caenorhabditis elegans Hypothetical
protein Y106G6H.7 protein.
Length = 893
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 202 ENSIADIYALSEEIKDAPESVKKIFSVAHLGQKEFHTLVKKELVN 336
+ S+ +I A EE+++AP ++ + S Q +EL+N
Sbjct: 130 QKSVCEIMAKLEELREAPSKIENLISKEQYQQAADTVTESRELIN 174
>AF024498-11|AAF39802.1| 310|Caenorhabditis elegans Serpentine
receptor, class x protein108 protein.
Length = 310
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 509 RKYFNSFFLRSIISCTVCFIFEFLGFFSIMFCIQRMYAVNLAILF 375
RK FFL+S +C + + F SI FC + AV +++ F
Sbjct: 218 RKMKIRFFLQSCFQDWICMLDVAMNFTSIEFCGSHVCAVLISMGF 262
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,377,028
Number of Sequences: 27780
Number of extensions: 263886
Number of successful extensions: 966
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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