Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10g18
(433 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 29 0.40
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 26 2.2
SPAC13C5.04 |||glutamine amidotransferase |Schizosaccharomyces p... 26 2.2
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 25 3.8
SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces pomb... 25 3.8
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 25 5.0
SPBC947.08c |||histone promoter control protein Hpc2 |Schizosacc... 25 6.6
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 25 6.6
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 24 8.7
SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protei... 24 8.7
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 28.7 bits (61), Expect = 0.40
Identities = 15/71 (21%), Positives = 30/71 (42%)
Frame = +1
Query: 172 ENPLTSTPALSRISIGGSSNTSIRRRSLIPQNRVANSRNEECNDDDAERSSLVASDRVVA 351
E + +TP + +++ + L P+N ++S N R +V +D+ +
Sbjct: 243 EQKIANTPISNNVTVESTGTNLHTHSQLNPENEQSSSEFYSLNPQSEIRKEVVVTDQPLF 302
Query: 352 STPQASPRRGR 384
ST +R R
Sbjct: 303 STADVPVKRKR 313
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 26.2 bits (55), Expect = 2.2
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 199 LSRISIGGSSNTSIRRRSLIPQNRVANSRNEECNDDDAERSS 324
+SR GGSS++ +NR+ +SR ++ +D +E S
Sbjct: 1 MSRFFKGGSSDSDAESVDSSEENRLTSSRLKKQDDSSSEEES 42
>SPAC13C5.04 |||glutamine amidotransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 248
Score = 26.2 bits (55), Expect = 2.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 199 RQALKLKDFPSFSTSIVLSYIRIFR 125
RQAL + P FST +V + +++ R
Sbjct: 188 RQALTFQGHPEFSTEVVNTMVKVLR 212
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 25.4 bits (53), Expect = 3.8
Identities = 18/94 (19%), Positives = 42/94 (44%)
Frame = +1
Query: 118 IIIEKYEYNSRRLKWKMMENPLTSTPALSRISIGGSSNTSIRRRSLIPQNRVANSRNEEC 297
I ++KY N++RL + + + T ++ +++ S+R + N C
Sbjct: 842 INVQKYIRNAKRLDRSALASTVFGTSEVNALTLTSRKGQSVRGTISV------NCDYRPC 895
Query: 298 NDDDAERSSLVASDRVVASTPQASPRRGRETMSS 399
+ + SS +S+ V ++T +P + T ++
Sbjct: 896 LRLNTDNSSKQSSENVQSATDPTTPAKDNSTSNA 929
>SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 455
Score = 25.4 bits (53), Expect = 3.8
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +1
Query: 271 VANSRNEECNDDDAERSSLVASDRVVASTPQASPRRGRETMSSSPQKEHFQ 423
VA + NE D + + S A + +T A+P+ E S +EH +
Sbjct: 80 VAATSNERQQHDASNQPSQAAQTTINKNTESATPKTVNEINKSQEFQEHVE 130
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 25.0 bits (52), Expect = 5.0
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -1
Query: 349 QPRDLMPQVMTFQHHHH 299
QP L P QHHHH
Sbjct: 107 QPAMLSPSTAASQHHHH 123
>SPBC947.08c |||histone promoter control protein Hpc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 338
Score = 24.6 bits (51), Expect = 6.6
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 169 MENPLTSTPALSRISIGGSSNTSIRRRSLIPQNRVANSRNEE 294
+E PLTSTP + +S S ++ + P + + N EE
Sbjct: 245 LETPLTSTPPIPPLSEPKHSPATVNEH-ISPPSALTNPSTEE 285
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 24.6 bits (51), Expect = 6.6
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 181 LTSTPALSRISIGGSSNTSIRRRSLIPQNRVANSRNEECNDDDAERSSLVASD 339
LT LS+ S+ ++ SL P N S NE+ N+D SSLV S+
Sbjct: 340 LTDDEQLSK-SLTSFKQVNVTDASLSP-NSHNTSDNEQNNEDYVSVSSLVGSE 390
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 24.2 bits (50), Expect = 8.7
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 274 ANSRNEECNDDDAERSSLVASDRVVASTPQASPRRGRETMSSSPQKEH 417
ANS CN+ D +S V S + A T R ++S P+ EH
Sbjct: 74 ANSFEGSCNNSDQSWTSRVTSKKNEAGTESGDASVRRIYVTSIPE-EH 120
>SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protein
Tgc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 24.2 bits (50), Expect = 8.7
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 148 RRLKWKMMENPLTSTPALSRISIGGSSNTSIRRRSLIPQNRVANSRNEECND 303
++ K K E P TST + S GSS+ + + P + AN +++ N+
Sbjct: 136 KKSKNKNGEEPETSTSVENAESAKGSSDENEANTATAPSSNEANGVDKKQNE 187
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.127 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,704,133
Number of Sequences: 5004
Number of extensions: 30476
Number of successful extensions: 104
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 104
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 154067960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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