Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10g18
         (433 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         27   0.38 
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         27   0.38 
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   3.5  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   6.1  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    22   8.1  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 26.6 bits (56), Expect = 0.38
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -1

Query: 412 LSVVMKT*SPFHDVEMPVG*XQPRDLMPQVMTFQHHHHCTPH 287
           +SVV+   SP H  + P+G   P    P       HHH  PH
Sbjct: 65  MSVVVPI-SPLHIKQEPLGSDGPMPAQPPHHHQHPHHHQLPH 105


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 26.6 bits (56), Expect = 0.38
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -1

Query: 412 LSVVMKT*SPFHDVEMPVG*XQPRDLMPQVMTFQHHHHCTPH 287
           +SVV+   SP H  + P+G   P    P       HHH  PH
Sbjct: 65  MSVVVPI-SPLHIKQEPLGSDGPMPAQPPHHHQHPHHHQLPH 105


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 8/20 (40%), Positives = 8/20 (40%)
 Frame = -1

Query: 346 PRDLMPQVMTFQHHHHCTPH 287
           P    P      HHHH  PH
Sbjct: 145 PLHYQPAAAAAMHHHHHHPH 164


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +2

Query: 359 HRHLHVVEGRLCLHHHRKNISKVA 430
           H H H     L  +HH+ N+ + A
Sbjct: 508 HHHHHPTAADLAGYHHQHNVIQAA 531


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 61  KKKELQTQRTFGNLNKLFGR 2
           +K +LQT+ T   LNK+ GR
Sbjct: 563 QKGQLQTRTTMIPLNKISGR 582


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.316    0.127    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 427,120
Number of Sequences: 2352
Number of extensions: 8138
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)