Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10g14
(569 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 96 2e-20
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 7e-17
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 72 4e-13
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 58 5e-09
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 57 9e-09
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 50 1e-06
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 50 2e-06
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 49 2e-06
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 48 4e-06
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 9e-06
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 45 4e-05
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 44 9e-05
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 44 1e-04
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 44 1e-04
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 44 1e-04
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 43 2e-04
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 42 4e-04
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 41 6e-04
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 41 8e-04
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 41 8e-04
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 40 0.002
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 40 0.002
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 40 0.002
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 39 0.002
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 39 0.002
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 39 0.003
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 39 0.003
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 38 0.008
SB_24012| Best HMM Match : RRM_1 (HMM E-Value=0.69) 37 0.010
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 37 0.013
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 36 0.031
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.054
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 35 0.054
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.071
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.094
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.094
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.094
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13) 33 0.12
SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 33 0.12
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 33 0.22
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 32 0.38
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 31 0.66
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 29 2.0
SB_23411| Best HMM Match : Glyco_transf_8 (HMM E-Value=8.4e-15) 29 2.7
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_4416| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 29 3.5
SB_14872| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_32529| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 27 8.2
SB_45343| Best HMM Match : No HMM Matches (HMM E-Value=.) 23 9.4
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 96.3 bits (229), Expect = 2e-20
Identities = 42/84 (50%), Positives = 59/84 (70%)
Frame = +2
Query: 191 EPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMV 370
E E RK+FIGGL++ TT+ LK+++ QWG IVD V+MK + RS+GFGF+TY + V
Sbjct: 45 ESEKLRKIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMK--RDGRSRGFGFVTYESSDSV 102
Query: 371 DEAQNNRPHKIDGRIVEPKRAVPR 442
+E + H +D R +EPKR+VPR
Sbjct: 103 NEVLKKKDHVLDDREIEPKRSVPR 126
Score = 54.4 bits (125), Expect = 6e-08
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Frame = +2
Query: 164 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQ------WGEIVDVVVMKD-PKTK 322
P + E TRK+F+GGL T + +KE++ GE++DV + +D K
Sbjct: 125 PRDESGAPEAMSKTRKIFVGGLASTTVEEDIKEYFNSLCRKNGMGEVIDVDLKRDRDNPK 184
Query: 323 RSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPR 442
R +GF F+T+ +V++ + H+I + E K+A P+
Sbjct: 185 RIRGFAFVTFDNDEIVEKVCAMKYHEIRMKQCEVKKAEPQ 224
Score = 35.1 bits (77), Expect = 0.041
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 478 LKKLFVAGLKQDIEEEDLREYFSTFGNIV 564
L+K+F+ GL + EE L++YFS +G IV
Sbjct: 49 LRKIFIGGLNWNTTEEGLKDYFSQWGTIV 77
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 481 KKLFVAGLKQDIEEEDLREYFST 549
+K+FV GL EED++EYF++
Sbjct: 139 RKIFVGGLASTTVEEDIKEYFNS 161
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 84.2 bits (199), Expect = 7e-17
Identities = 37/82 (45%), Positives = 60/82 (73%), Gaps = 4/82 (4%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ----AHMVDE 376
KLF+GGL+ TT+ +L+E++E +GE+ DVVV+ D TK+S+GFG++T++ +++ +
Sbjct: 15 KLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKD 74
Query: 377 AQNNRPHKIDGRIVEPKRAVPR 442
N H+IDG+ VE KRA+PR
Sbjct: 75 KVENGAHRIDGKEVEVKRAIPR 96
Score = 51.2 bits (117), Expect = 6e-07
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Frame = +2
Query: 197 EHTRKLFIGGLDYRTTDSSLKE----FYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAH 364
E T+K+F+GGL T ++E E+ + VD+++ K+ +TK +GF F+ +
Sbjct: 105 EKTKKIFVGGLPEDATKEDIQEAIESLLEEKVDKVDLIMKKEDETKH-RGFAFVELNNED 163
Query: 365 MVDEAQNNRPHKIDGRIVEPKRAVPRGRD 451
DE + + G++VE K+A PR R+
Sbjct: 164 QADELCCVKKIHVKGKMVEAKKATPRDRN 192
Score = 34.7 bits (76), Expect = 0.054
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 475 PLKKLFVAGLKQDIEEEDLREYFSTFGNI 561
P KLFV GL ++ E LREYF +G +
Sbjct: 12 PRAKLFVGGLNRETTNETLREYFEAYGEL 40
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 71.7 bits (168), Expect = 4e-13
Identities = 35/90 (38%), Positives = 54/90 (60%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 388
KLF+GG+ Y + D +L++F+ Q+GEI + VV+KD TK+SKG+GF+T + + + A N
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAELACKN 70
Query: 389 RPHKIDGRIVEPKRAVPRGRD*KTRS*CHR 478
+ I+GR A + TR C R
Sbjct: 71 KRPMIEGRQANVNLAYLGAKPKPTRGLCMR 100
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 484 KLFVAGLKQDIEEEDLREYFSTFGNI 561
KLFV G+ + ++ LR++F+ FG I
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQFGEI 36
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 60.1 bits (139), Expect = 1e-09
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN-- 385
L + GL Y TT+S +KE++ ++GEI V DP T+RS+GFGF+ + + ++A+N
Sbjct: 117 LIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKD---EDAKNVL 173
Query: 386 NRPHKIDGRIVEPKRAVPR 442
+ H+I GR+ E + P+
Sbjct: 174 STSHRIQGRLCEVRLPRPK 192
Score = 44.8 bits (101), Expect = 5e-05
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 188 EEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY-SQAH 364
EE +KLF+G L TT+ +L E++ Q+GE+ DV + PK R FGF+T+ S A+
Sbjct: 193 EELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYI---PKPFRH--FGFVTFASVAN 247
Query: 365 MVDEAQNN 388
V A N
Sbjct: 248 CVSIAFEN 255
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +1
Query: 448 RLKDQKLVPPLKKLFVAGLKQDIEEEDLREYFSTFGNI 561
R K++ VP KKLFV L + E+ L EYF+ FG +
Sbjct: 190 RPKEELNVP--KKLFVGRLPESTTEKTLMEYFAQFGEV 225
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 58.0 bits (134), Expect = 5e-09
Identities = 23/53 (43%), Positives = 38/53 (71%)
Frame = +2
Query: 254 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGR 412
L++ +E++GE+ + VVM+DP TKRS+GFGF+T+ VD N+ ++DG+
Sbjct: 124 LRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGK 176
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +1
Query: 433 SSKGKRLKDQKLVPPLKKLFVAGLKQDIEEEDLREYFSTFGNI 561
+S + L +K+V KK+F+ GL + EED+++YFS FG +
Sbjct: 167 NSGAQELDGKKMVTTTKKIFIGGLSTNTSEEDMKKYFSQFGKV 209
Score = 34.7 bits (76), Expect = 0.054
Identities = 11/28 (39%), Positives = 22/28 (78%)
Frame = +2
Query: 203 TRKLFIGGLDYRTTDSSLKEFYEQWGEI 286
T+K+FIGGL T++ +K+++ Q+G++
Sbjct: 182 TKKIFIGGLSTNTSEEDMKKYFSQFGKV 209
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 57.2 bits (132), Expect = 9e-09
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVD 373
KLF+GGL Y TT SLKE++ ++GE+V V + D T R +GF F+ + D
Sbjct: 30 KLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEAD 84
Score = 57.2 bits (132), Expect = 9e-09
Identities = 26/87 (29%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +2
Query: 191 EPEHTR--KLFIGGLDYRTTDSSLKEFY-EQWGEIVDVVVMKDPKTKRSKGFGFITYSQA 361
+P H R K+F+GGL T+D ++E++ + + + ++ + + + R +GF F+++
Sbjct: 96 KPPHLRVKKIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSE 155
Query: 362 HMVDEAQNNRPHKIDGRIVEPKRAVPR 442
VD+ + H I+G VE KRA+P+
Sbjct: 156 DTVDKICETQFHNIEGNKVEVKRALPK 182
Score = 35.1 bits (77), Expect = 0.041
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +1
Query: 433 SSKGKRLKDQKLVPPLKKLFVAGLKQDIEEEDLREYFSTFGNIV 564
S+K + KD + KLFV GL + +E L+EYFS +G +V
Sbjct: 17 SNKTRMTKDDDI----GKLFVGGLSYETTKESLKEYFSKYGELV 56
Score = 31.9 bits (69), Expect = 0.38
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 478 LKKLFVAGLKQDIEEEDLREYF 543
+KK+FV GLK + +E +REYF
Sbjct: 102 VKKIFVGGLKPETSDEKIREYF 123
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/79 (31%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY-SQAHMVDEAQN 385
K +IG LD++ ++ L++ + ++ ++VDV V+ D +T+R +GF F+T+ S+ +M D
Sbjct: 231 KCYIGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINE 289
Query: 386 NRPHKIDGRIVEPKRAVPR 442
+ DGR ++ +A R
Sbjct: 290 LDGQEFDGRSMKVNQARSR 308
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +2
Query: 284 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVPRG 445
++ V V+ D +T R +GFGF+T+ +D+A + +DGR ++ +A PRG
Sbjct: 35 LLSVKVITDRETGRPRGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKAQPRG 89
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/80 (27%), Positives = 48/80 (60%)
Frame = +2
Query: 203 TRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 382
++++F+ G + TT+S L+ F+E++G + + +++D K SKG+ FIT+ + D +
Sbjct: 7 SKRIFVKGFNRETTESELRAFFEEYGVVKESKIVRD-KHGVSKGYAFITFESQEVADGLR 65
Query: 383 NNRPHKIDGRIVEPKRAVPR 442
+N+ +++ +AV R
Sbjct: 66 DNKGLDFKDKVLSIGQAVRR 85
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 388
+ +IG L Y + +L+E + ++VDV V+ D +T R +GFGF+T+ +++A +
Sbjct: 6 RCYIGNLSYSVDEQALEEKFHGC-DVVDVKVITDRETGRPRGFGFVTFGSKEEMEKAIDE 64
Query: 389 -RPHKIDGRIVEPKRAVPRG 445
DGR ++ +A PRG
Sbjct: 65 FDGQDFDGRPMKVNQAQPRG 84
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/82 (29%), Positives = 44/82 (53%)
Frame = +2
Query: 167 SESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 346
S +D +P TR LF+G ++ TT LKE +E++GE++DV + K P + + F+
Sbjct: 236 SNYSEDEFDPGCTRTLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQP---GNNPYAFV 292
Query: 347 TYSQAHMVDEAQNNRPHKIDGR 412
+++ +A+ + GR
Sbjct: 293 QFAELSSAIQARRKMDREYVGR 314
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 48.4 bits (110), Expect = 4e-06
Identities = 19/64 (29%), Positives = 38/64 (59%)
Frame = +2
Query: 188 EEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHM 367
++P +L++G L + T++ +K +E +G + V ++ D +T RSKG+GF+ + +A
Sbjct: 236 KQPLGPTRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEA 295
Query: 368 VDEA 379
A
Sbjct: 296 AKRA 299
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +2
Query: 164 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGF 343
P ++ E + R +F L L+EF+ + G++ DV ++ D ++RSKG +
Sbjct: 132 PEPMTEESAEEKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAY 191
Query: 344 ITYSQAHMV 370
I ++ V
Sbjct: 192 IEFTDKSAV 200
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 48.0 bits (109), Expect = 5e-06
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Frame = +2
Query: 152 LNMKPSESGDDYEEPEH--TRKLFIGGLDYRTTDSSLKEFYEQWGEI--VDVVVMKDPKT 319
+ +K + DD E H T+KLFIGGL ++ +K +++ +++D +T
Sbjct: 84 VEVKRAMPRDDPNELAHVRTKKLFIGGLKDEHSEEDVKTALAPLSPFAPLEIKMVRDRET 143
Query: 320 KRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPRG 445
+ KG+ F+ + H+VD+ R ++ G+ VE K+A G
Sbjct: 144 NKFKGYCFVNFPNEHIVDKLYLVRHIQVKGKDVEMKKAADLG 185
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQW--GEIVDVVVMKDPKTK--RSKGFGFITYSQ-AHMVD 373
KLF+GGL+ TT+ +++ +++ + G DV + KT +S+ F F+ +S + ++D
Sbjct: 9 KLFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKTPEGKSRKFCFVEFSNGSDIID 68
Query: 374 E-AQNNRPHKIDGRIVEPKRAVPR 442
N H ID + VE KRA+PR
Sbjct: 69 NIVFNFESHSIDNKQVEVKRAMPR 92
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 478 LKKLFVAGLKQDIEEEDLREYFSTF 552
L KLFV GL +D EE +R YF +F
Sbjct: 7 LMKLFVGGLNEDTTEETVRAYFKSF 31
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 47.2 bits (107), Expect = 9e-06
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +2
Query: 314 KTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPRG 445
+ + KGFGF+T+ ++ +PH +DG+ ++PK AVPRG
Sbjct: 137 RARMLKGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPRG 180
Score = 35.1 bits (77), Expect = 0.041
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 484 KLFVAGLKQDIEEEDLREYFSTFGNI 561
K+F+ GL EEDL+EYFST+G +
Sbjct: 203 KVFIGGLAFGTTEEDLKEYFSTYGMV 228
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEI 286
K+FIGGL + TT+ LKE++ +G +
Sbjct: 203 KVFIGGLAFGTTEEDLKEYFSTYGMV 228
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 46.4 bits (105), Expect = 2e-05
Identities = 16/47 (34%), Positives = 33/47 (70%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 352
+++G L Y T+S L + +E++G++V V +++D +T+ S+G FI +
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILF 58
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWG-EIVDVVVMKDPKTK-------RSKGFGFITYSQAH 364
K++ G L ++ T LK +E + DV+++K+P+ + RS+GFGF+T++
Sbjct: 51 KVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFANPE 110
Query: 365 MVDEAQNNRPHK-IDGRIVEPKRAVPRGRD 451
A + K + GR ++ ++ RGRD
Sbjct: 111 DAQTAVKSLNGKEVQGRTLKIAPSISRGRD 140
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 45.2 bits (102), Expect = 4e-05
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 206 RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY-SQAHMVDEAQ 382
R +F+G + Y ++ LKE + + G ++ ++ D +T + KG+GF Y Q + +
Sbjct: 25 RSVFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMR 84
Query: 383 NNRPHKIDGR 412
N ++++GR
Sbjct: 85 NLNGYELNGR 94
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/58 (31%), Positives = 38/58 (65%)
Frame = +2
Query: 206 RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 379
RKL+IG L++ + + +++ +E++G + V +++D ++ RS+GFGF+ A + A
Sbjct: 9 RKLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPA 65
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/58 (29%), Positives = 35/58 (60%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN 385
L + L YRTT LK+ ++++G++ D+ + +D T S+GF F+ + + ++A +
Sbjct: 18 LKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAEDAMD 75
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 44.0 bits (99), Expect = 9e-05
Identities = 22/75 (29%), Positives = 43/75 (57%)
Frame = +2
Query: 197 EHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDE 376
+++R +F+GGL T + LK+++EQ+GE+ V +M+ S+ +GF+ + E
Sbjct: 77 KNSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRIMR-TFLGYSRNYGFVLFKDDGPSKE 135
Query: 377 AQNNRPHKIDGRIVE 421
+ H I+G+ V+
Sbjct: 136 VL-KKSHVINGKTVD 149
Score = 34.7 bits (76), Expect = 0.054
Identities = 19/93 (20%), Positives = 42/93 (45%)
Frame = +2
Query: 152 LNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSK 331
L ++ + ++ ++ R LF+ L T + + ++ +G++ V ++ D +T +SK
Sbjct: 301 LKVRTVQLPNEEKQGVRERTLFVDNLSEDTKELDVLRYFRPYGQVAKVHILTDRETGKSK 360
Query: 332 GFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKR 430
G G + V++ H I V +R
Sbjct: 361 GCGVVKLRHPGTVNKILEEPVHVIGKSQVRLRR 393
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/41 (31%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Frame = +2
Query: 203 TRKLFIGGLDYRTTDSSLKEFYEQWGEI--VDVVVMKDPKT 319
++KL + LD+ TT L+E++E+ GE+ +D+++ + +T
Sbjct: 235 SKKLMVQDLDFDTTVDELREYFEKCGELTGIDLLINSEKRT 275
Score = 31.5 bits (68), Expect = 0.50
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 481 KKLFVAGLKQDIEEEDLREYFSTFGNIVS 567
+ +FV GL +EE L++YF FG + S
Sbjct: 80 RSVFVGGLASGTDEEGLKDYFEQFGEVES 108
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +2
Query: 197 EHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDE 376
+H R +FIG L + + L+E + G + V +++D KT KGFG++ + V
Sbjct: 53 DHQRSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVF 112
Query: 377 AQNNRPHKIDGR 412
A + GR
Sbjct: 113 ALKMNNAEFKGR 124
Score = 34.7 bits (76), Expect = 0.054
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 481 KKLFVAGLKQDIEEEDLREYFSTFGNIVS 567
+ +F+ L DIEEE LRE F+T GN+ S
Sbjct: 56 RSVFIGNLPFDIEEEPLRELFTTCGNVES 84
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +2
Query: 185 YEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAH 364
++E R ++I SSL+ + +G I D+ +++ +T +SKGFG++TY A
Sbjct: 56 HKEEHDQRTIYIRDFRPDIRKSSLESVFGPYGAIEDLSIIRT-QTGKSKGFGYVTYENAE 114
Query: 365 MVDEAQNNRPHKIDGR--IVEPK 427
A H IDG+ I EPK
Sbjct: 115 SAQRALAG-THIIDGKWVIAEPK 136
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 191 EPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMV 370
+P+ +++ D +KE + G+IV + VM DP+ K SKGFGF+++
Sbjct: 104 QPKKFTNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGK-SKGFGFVSFETPEEA 162
Query: 371 DEAQNNRPHK-IDGRIVEPKRAVPR 442
+EA N K I GR + RA R
Sbjct: 163 EEAVNVLNGKEIGGRRLWAGRAKKR 187
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/72 (36%), Positives = 37/72 (51%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 391
L+I LD D L+E + +G I VMKD K SKGFGF+ +S +A
Sbjct: 214 LYIKNLDDPIDDERLREEFSPYGTISSAKVMKDDKGN-SKGFGFVCFSSPEEATKAVT-- 270
Query: 392 PHKIDGRIVEPK 427
+++GRI+ K
Sbjct: 271 --EMNGRILISK 280
Score = 36.3 bits (80), Expect = 0.018
Identities = 22/91 (24%), Positives = 43/91 (47%)
Frame = +2
Query: 158 MKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGF 337
M PS +Y L++G L T++ L E + G ++ + V +D T+RS G+
Sbjct: 1 MNPSTGAANYP----IASLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGY 56
Query: 338 GFITYSQAHMVDEAQNNRPHKIDGRIVEPKR 430
++ + Q +A ++DG ++ K+
Sbjct: 57 AYVNFQQPG--HDAALEAIARVDGMLLNDKK 85
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/49 (36%), Positives = 32/49 (65%)
Frame = +2
Query: 296 VVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPR 442
++M D T+R +GFGF+T+ + D+A + + H I+ + VE K+A P+
Sbjct: 1 MLMFDKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPK 49
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +2
Query: 194 PEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVD 373
P+ K+FIGGL + +KE +GE+ ++KD T SKG+ F Y + D
Sbjct: 669 PDSPHKIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEYVDLGITD 728
Query: 374 EA 379
A
Sbjct: 729 VA 730
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +2
Query: 149 ILNMKPSESGDDYEEPEHTRKLF-IGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKR 325
I K S D+++ +LF I D+ D L+ +E +G+I V +++D KT+
Sbjct: 35 IAQSKHSGGKSDFQDQTTMTRLFVICPKDFN--DEDLRSKFESFGDIEYVQIVRDHKTRE 92
Query: 326 SKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPK 427
+KG+G++ + ++ A N + EPK
Sbjct: 93 NKGYGYVKFHKSSTAAMALENCDKSLKAVWAEPK 126
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +2
Query: 182 DYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFIT 349
D E EH + +IG L Y + +L+E + +VDV V+ D +T R +GFGF+T
Sbjct: 76 DLEMAEH--RCYIGNLSYSVDEQALEEKFHDCN-VVDVRVITDRETGRPRGFGFVT 128
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 41.1 bits (92), Expect = 6e-04
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Frame = +2
Query: 170 ESGDDYEEPEHTRK--LFIGGLDYRTTDSSLKEFYEQWGEIVDVVV--MKDPKTKRSKGF 337
ES D P+ ++K L I L + T++ LKE + +GE+ + V K + R GF
Sbjct: 233 ESKDKSSSPKGSKKSRLIIRNLAFNCTEAILKETFSAFGEVSEASVPQKKVGRRNRKMGF 292
Query: 338 GFITYSQAHMVDEA-QNNRPHKIDGRIVEPKRAVPR 442
GF+ ++ +A + KI GR V AVP+
Sbjct: 293 GFVQFTNVFDAAKALEEMNAKKILGRPVAVDWAVPK 328
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 391
+FI L + +T ++ ++Q+G+I V+ D T+ SKG F+ Y A V +
Sbjct: 418 VFIRNLSFDSTQKNITNLFKQFGDIAYCKVVVDHLTQHSKGSAFVKYRSAESVTQCLAAT 477
Query: 392 PHKIDGRIVEPKR 430
+G ++ R
Sbjct: 478 DEDSEGLFLDGNR 490
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTK-RSKGFGFITYSQAHMVDEAQNN 388
+F+ L Y TD+ K +E+ G + ++KD + R +GFG++T++ +A++N
Sbjct: 22 IFVRNLPYNITDAEFKSAFEEIGPLKRGFIVKDKDNQNRCRGFGYVTFALEEDALKAKDN 81
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 40.7 bits (91), Expect = 8e-04
Identities = 25/72 (34%), Positives = 38/72 (52%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 388
++FIG + + L +E+ G I D +M DP + +KGF F T+S DEAQ N
Sbjct: 153 QVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNK---DEAQ-N 208
Query: 389 RPHKIDGRIVEP 424
K+D + + P
Sbjct: 209 AVKKLDNKEIRP 220
Score = 31.5 bits (68), Expect = 0.50
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +2
Query: 164 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGF 343
P E DD + + + +++ L T+ LKE Y Q+G + + K+ K + F
Sbjct: 316 PQEEPDD-DAMKKVKVVYLRNLSPSITEEKLKEEYSQYGAV--------DRVKKLKDYAF 366
Query: 344 ITYSQA-HMVDEAQNNRPHKIDGRIVEPKRAVPR 442
+ +++ H + + ++DG +E A P+
Sbjct: 367 VHFTERDHALKAIEETDGKEMDGLKIEASLAKPQ 400
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 40.7 bits (91), Expect = 8e-04
Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 391
++IGGL T++ L E + ++G + DVV+++D ++ +S+ GF+ + + V EA N
Sbjct: 526 VWIGGLSEDVTENVLLELFNKFGPVKDVVILRD-ESGKSRQSGFVHFWSSD-VAEAANVG 583
Query: 392 PHKID--GRIVEPKRA 433
+ D G+IVE K A
Sbjct: 584 MNGCDILGKIVETKYA 599
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 40.7 bits (91), Expect = 8e-04
Identities = 16/64 (25%), Positives = 34/64 (53%)
Frame = +2
Query: 188 EEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHM 367
+E + +++I + + +K +E +G++V + K+P T + KG+GFI Y
Sbjct: 193 QEAKKYARIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQS 252
Query: 368 VDEA 379
++A
Sbjct: 253 ANDA 256
Score = 31.9 bits (69), Expect = 0.38
Identities = 10/48 (20%), Positives = 26/48 (54%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 352
++++G +++ + ++ + +G I + + DP + KGF F+ Y
Sbjct: 103 RVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEY 150
Score = 27.9 bits (59), Expect = 6.2
Identities = 8/27 (29%), Positives = 18/27 (66%)
Frame = +1
Query: 484 KLFVAGLKQDIEEEDLREYFSTFGNIV 564
++++A + D+ E+D++ F FG +V
Sbjct: 200 RIYIASVHPDLLEDDIKSVFEAFGKVV 226
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +2
Query: 206 RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN 385
R +F+G L T +S++ E++ GE V+ V + +SKGF F+ + V+
Sbjct: 42 RTIFVGSLHPSTVESTIFEYFSTLGEQVEHVKCIRTLSGKSKGFAFVRLRKKEAVESVLG 101
Query: 386 NRPHKIDGRIVEPKR 430
H ID V ++
Sbjct: 102 RDDHVIDNSDVSMEK 116
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = +2
Query: 188 EEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHM 367
E+ + RK+ + + +S + E + GEI V + ++ KTK KG +T++
Sbjct: 115 EKQDTYRKVILKNIPSSIGESQILEHFSSSGEIASVYIPENLKTKERKGHCIVTFASVTE 174
Query: 368 VDEAQNNRPHKIDG 409
E R H I G
Sbjct: 175 AFEVVKKRKHHIHG 188
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/73 (34%), Positives = 38/73 (52%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 391
LFI L TD+ L + ++ +G ++ V D +T SK FGF++Y V AQN
Sbjct: 279 LFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDN---VMSAQNAI 335
Query: 392 PHKIDGRIVEPKR 430
H ++G + KR
Sbjct: 336 QH-MNGFQIGAKR 347
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 352
++F G L TD SL + ++ + +++D K+ +SKG+GF+++
Sbjct: 218 RIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSF 265
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +2
Query: 179 DDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ 358
DD T + + L T +S L+E + G I + + KD T +SKGF FI +
Sbjct: 172 DDGSGQHETATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINF-- 229
Query: 359 AHMVDEAQ 382
H D A+
Sbjct: 230 VHREDAAR 237
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/47 (31%), Positives = 32/47 (68%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 352
+++GGLD + +++ + E + Q G +V+V + KD T+ +G+GF+ +
Sbjct: 15 IYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEF 61
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVDVV-VMKDPKTKRSKGFGFITYSQAHMVDEA 379
LFIG LD + L + + +G I+ +M+D T SKGF FI ++ D A
Sbjct: 102 LFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAA 158
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +2
Query: 206 RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-Q 382
R ++GGL + L + +G+I DV + D T + +GFGF+ + A A
Sbjct: 5 RVAYVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAID 64
Query: 383 NNRPHKIDGRIVEPKRAVP 439
N ++ GR + A P
Sbjct: 65 NMNESELFGRTIRVNLAKP 83
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +2
Query: 179 DDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 352
D EE L+I GL TTD L ++G I+ + D T KG+GF+ +
Sbjct: 91 DTGEEKLSKTNLYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDF 148
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 37.5 bits (83), Expect = 0.008
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 200 HTRKLFIGGLDYRTTDSSL-KEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDE 376
H+R LF+ L + L KE + Q G + V +P S+GF F+ Y+ A ++
Sbjct: 203 HSRTLFVDRLPRDFKNGGLIKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEK 262
Query: 377 AQNNRPHKIDGRIVE 421
Q R H +GR VE
Sbjct: 263 GQ--RAH--NGRQVE 273
Score = 37.1 bits (82), Expect = 0.010
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ--- 382
LF+G L + T++ + +G I + +++ T SKG+GF+ Y+ +A+
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQL 174
Query: 383 -NNRPHKIDGRIV 418
N I GRI+
Sbjct: 175 LNTASKYIGGRIL 187
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 37.5 bits (83), Expect = 0.008
Identities = 12/48 (25%), Positives = 32/48 (66%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYS 355
+++G + + ++ +K+F+EQ+G + + + + K+ RSKG+ F+ ++
Sbjct: 100 IYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFA 147
>SB_24012| Best HMM Match : RRM_1 (HMM E-Value=0.69)
Length = 166
Score = 37.1 bits (82), Expect = 0.010
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 302 MKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAV 436
+KD K+ RSK +GF+ + ++A N+PH I+G+ P V
Sbjct: 94 VKDLKSGRSKKYGFVFFKDEEACEKAMGNQPHFIEGQKSGPSSPV 138
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 36.7 bits (81), Expect = 0.013
Identities = 23/83 (27%), Positives = 43/83 (51%)
Frame = +2
Query: 182 DYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQA 361
D + P++ LF+ L+ TTD L+ + ++G I+ V++D KT S + FI + +
Sbjct: 114 DIKPPDNV--LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEK- 170
Query: 362 HMVDEAQNNRPHKIDGRIVEPKR 430
DE K+D +++ +R
Sbjct: 171 ---DEDCERAYFKMDNVLIDDRR 190
Score = 30.7 bits (66), Expect = 0.88
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 451 LKDQKLVPPLKKLFVAGLKQDIEEEDLREYFSTFGNIVS 567
+ D + PP LFV L +EDL FS FG I+S
Sbjct: 110 IPDADIKPPDNVLFVCKLNPVTTDEDLEIIFSRFGTILS 148
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 36.7 bits (81), Expect = 0.013
Identities = 17/65 (26%), Positives = 37/65 (56%)
Frame = +2
Query: 188 EEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHM 367
E+P+ TR LF+G L+ + L+ +E++G ++DV + K P + + F+ ++ +
Sbjct: 231 EDPKATRTLFVGNLETGISCQDLRLSFEKFGVVLDVDI-KRPARGQGNTYAFVKFADLDV 289
Query: 368 VDEAQ 382
+A+
Sbjct: 290 AAKAK 294
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +2
Query: 185 YEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKG 334
Y+ + K+F+G + ++ LK+F+ +G++V ++ D KRSKG
Sbjct: 72 YKVVSNKCKVFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKG 121
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 35.5 bits (78), Expect = 0.031
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 167 SESGD-DYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGF 343
S SG D + P +R + + D ++ +EQ+G I DV V+KD TK ++G +
Sbjct: 11 SNSGRIDVDNPPFSRVFIVCSKRHNAED--IRSAFEQYGTIEDVWVVKDKATKENRGVCY 68
Query: 344 ITYSQA 361
+ + +A
Sbjct: 69 VKFVKA 74
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 34.7 bits (76), Expect = 0.054
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 275 WGEIVDVVVMKDPKTKRSKGFGFITY-SQAHMVDEAQNNRPHKIDGRIV 418
+GEIV+V +++D KT + KGF F+ Y Q + N K+ GR +
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNGIKLGGRTI 50
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 34.7 bits (76), Expect = 0.054
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 293 VVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVPRG 445
V ++ D +T R +GFGF+T+ +++A + +DGR ++ A PRG
Sbjct: 125 VNIITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKVNEAKPRG 176
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 34.3 bits (75), Expect = 0.071
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +2
Query: 188 EEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHM 367
E+PE R +FIGGL + + E + GEI + + K K + ++ F + +
Sbjct: 345 EKPEGCRTVFIGGLPESINEHIINEIFYVCGEITSIRISKG-KGENARKFCHLRFGAKES 403
Query: 368 VDEA 379
VD A
Sbjct: 404 VDTA 407
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 33.9 bits (74), Expect = 0.094
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 173 SGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 352
SG + P ++ L + L Y TT SL +E + V+ D ++ S+GFGF+ Y
Sbjct: 279 SGGRDQNPPNS-SLIVRNLSYDTTTDSLGAAFEGCS---NAKVIFDRESGESRGFGFVDY 334
Query: 353 SQAHMVDEAQNNRP-HKIDGRIVEPKRAVPR 442
+ + ++DGR V A PR
Sbjct: 335 DDVETAKKVLSEMAGAEVDGRQVRLDFASPR 365
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 33.9 bits (74), Expect = 0.094
Identities = 19/91 (20%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +2
Query: 164 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGF 343
P+++ ++ E + L++ L T + LK + Q+G++V ++ + K ++ FG
Sbjct: 335 PAKATPTKDKKEGGKSLWVANLSSITRAADLKTRFSQYGKVVGAKIVTNSKAPGAQCFGL 394
Query: 344 ITYSQAHMVDEA-QNNRPHKIDGRIVEPKRA 433
+T + + + Q+ ++ GR + RA
Sbjct: 395 VTMTTSEEAAKCIQHLHRTELHGRAITVDRA 425
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 33.9 bits (74), Expect = 0.094
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 197 EHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ 358
E ++FIG + + L E+ GEI + + DP T +KGF F T+++
Sbjct: 150 ESGTEVFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTFTE 203
>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
Length = 260
Score = 33.5 bits (73), Expect = 0.12
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Frame = +2
Query: 164 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVM------------- 304
PS D P ++L + + +R D+ L++ + +G I DV ++
Sbjct: 57 PSAENGDSSGP---KRLHVTNIPFRFRDNDLRQMFGSFGVIADVEIIYNERGSKHAVRFP 113
Query: 305 --KDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKI-DGRIVE 421
+P R +GFGF+T++ A ++A+ I DGR VE
Sbjct: 114 TRPNPLNLRIEGFGFVTFNTAAEANKAREKLNGTIVDGRKVE 155
>SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 462
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 352
+F+ LDY+ LK+ ++ G ++ +M+D + K+SKG G + +
Sbjct: 187 VFVTNLDYKVNWQKLKDTFKCAGHVIRAEIMEDDE-KKSKGMGTVQF 232
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 275 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 388
+GEIV+V +++D KT + KGF F+ Y A +N
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDN 39
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 388
KL++ L ++E + +G + V + D S+GF ++ Y ++A +
Sbjct: 1158 KLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALKH 1217
Query: 389 RP-HKIDGRIVEPKRAV-PRGRD 451
+IDG+ + + + PR RD
Sbjct: 1218 MDGGQIDGQEIAVQSVLPPRPRD 1240
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 31.9 bits (69), Expect = 0.38
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 346
+LF+G L + +KE ++++GE+ +V + K+ KGFGFI
Sbjct: 54 RLFVGNL-IDCDEEEMKEMFKKYGEVAEVFINKE------KGFGFI 92
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 31.1 bits (67), Expect = 0.66
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSK 331
KLF+G + + L+ +E +G+I ++ ++KD T + K
Sbjct: 171 KLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHK 211
Score = 31.1 bits (67), Expect = 0.66
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 481 KKLFVAGLKQDIEEEDLREYFSTFGNI 561
+KLFV + + +EEDLR FS FG I
Sbjct: 214 RKLFVGMISKHAKEEDLRVMFSPFGTI 240
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 31.1 bits (67), Expect = 0.66
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFG 340
LFI L TD+ L + ++ +G ++ V D +T SK FG
Sbjct: 231 LFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFG 273
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 31.1 bits (67), Expect = 0.66
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI---TYSQAHMVDEAQ 382
LF+ + + + E + +GEI ++ V D +T KG+ + T+ +A EA
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEAL 354
Query: 383 NNRPHKIDGRIVEPKRAVPRGRD*KTRS 466
N ++ G+ + A RG K+RS
Sbjct: 355 NGA--EMLGQNISVDWAFIRGPSKKSRS 380
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 487 LFVAGLKQDIEEEDLREYFSTFGNI 561
LFV + ++ +E+D+ E FS +G I
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEI 319
>SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 30.7 bits (66), Expect = 0.88
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 457 DQKLVPPL-KKLFVAGLKQDIEEEDLREYFSTFGNI 561
D + +P +K+FV GL DI+E+++ F FG++
Sbjct: 335 DSEHIPRFSRKVFVGGLPPDIDEDEIHASFCRFGSL 370
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2
Query: 290 DVVVMKDPKTKRSKGFGFITY 352
+V V+KDP +SKGFGF+++
Sbjct: 541 EVRVVKDPAKNKSKGFGFVSF 561
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +2
Query: 206 RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVM---KDPKTKRSKGFGFITYSQAHMVDE 376
RKL+IG LD R ++ ++ + +Q+GEI + P +G+ F+ + + +
Sbjct: 387 RKLWIGNLDKRLSEFNILKILQQFGEIEHFQFLFHGNGPNRGEPRGYCFVEFKKKEDARK 446
Query: 377 AQNNRPHKI 403
A KI
Sbjct: 447 ALRGLNKKI 455
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 487 LFVAGLKQDIEEEDLREYFSTFGNIVS 567
L+V GL+ + E+DLR++F FG + S
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGELRS 332
Score = 28.7 bits (61), Expect = 3.5
Identities = 9/25 (36%), Positives = 19/25 (76%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEI 286
L++GGL+ + T+ L++ + Q+GE+
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGEL 330
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +1
Query: 487 LFVAGLKQDIEEEDLREYFSTFGNIVS 567
L+++GL +D++EE++ F FG I++
Sbjct: 115 LYISGLPKDMKEEEVEALFKPFGKIIT 141
>SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Frame = +2
Query: 284 IVDVVVMKDPKTKRSKGFGFI---TYSQAHMVDE--AQNNRPHKIDGRIV 418
I D+ ++KD T S+GF F+ T +A + E A N P IDGR++
Sbjct: 436 IYDIRLIKDKVTGTSRGFCFVELATIEEATQLLELIAAMNPPFMIDGRVI 485
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 188 EEPEHT-RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSK 331
E+PE R +F+G L +LK+++ ++GE+ V K + +K
Sbjct: 14 EDPERLDRTVFVGNLPLTLKKKALKKYFSKYGEVESVRFRSATKMESTK 62
>SB_23411| Best HMM Match : Glyco_transf_8 (HMM E-Value=8.4e-15)
Length = 582
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +2
Query: 218 IGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPH 397
I GL ++S+ +++ EI V + KT+ G +T+ + V +NRPH
Sbjct: 11 IKGLPSEVPENSIVSYFQD-SEIGGGAVKRLDKTQ--DGCTLVTFENSEAVKTFMSNRPH 67
Query: 398 KIDGRIVE 421
+G ++E
Sbjct: 68 HFNGVLLE 75
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN 385
L++ + Y + + Q G + V +M D + ++ KGF F+T + +EAQN
Sbjct: 277 LYVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQ---EEAQN 331
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 28.7 bits (61), Expect = 3.5
Identities = 9/21 (42%), Positives = 18/21 (85%)
Frame = +2
Query: 290 DVVVMKDPKTKRSKGFGFITY 352
+V+V+ D +T+RS+ FG++T+
Sbjct: 4 EVIVVYDRETRRSRNFGYVTF 24
>SB_4416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +2
Query: 368 VDEAQNNRPHKIDGRIVEPKRAVPRGRD 451
V++ Q+++P K + R++ PKR P+G+D
Sbjct: 385 VEDNQSSKPKK-EPRLIRPKRNKPKGKD 411
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 484 KLFVAGLKQDIEEEDLREYFSTFGNI 561
+++V L QD+ E+DL + F +G+I
Sbjct: 262 RVYVGNLPQDVREKDLHDIFYKYGHI 287
>SB_14872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1182
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 233 YRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKG 334
+ TT+ L+ F+ +G + DV ++ D +T +KG
Sbjct: 1075 FLTTELELETFFSNFGPVADVRIVCDRRTGLNKG 1108
>SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 481 KKLFVAGLKQDIEEEDLREYFSTFGNIV 564
K L + L + I+E+DL+E +GN++
Sbjct: 119 KDLIIQNLPKGIQEKDLKELLQLYGNVL 146
>SB_32529| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 1841
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 430 SSSKGKRLKDQKLVPPLKKLFVAGLKQDIEEEDLR 534
+S + +R K Q + PL++ LKQ+IE D R
Sbjct: 96 ASYENRRQKFQNMAAPLRRKLSLNLKQEIENFDRR 130
>SB_45343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 23.4 bits (48), Expect(2) = 9.4
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 406 RKNCRAKTSSSKGKRLKDQK 465
RK CRAK +SK + LKD K
Sbjct: 280 RKVCRAKFYNSKVECLKDCK 299
Score = 22.2 bits (45), Expect(2) = 9.4
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +1
Query: 286 CRCSCNERPKNQEIKRI 336
C C C + + +E+KR+
Sbjct: 237 CTCGCKDLARAKELKRL 253
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,522,304
Number of Sequences: 59808
Number of extensions: 279418
Number of successful extensions: 870
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1349364063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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