Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10g12
(669 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53340-2|AAA96207.1| 142|Caenorhabditis elegans Ap-2 small chai... 290 5e-79
AF016440-4|AAB65902.1| 157|Caenorhabditis elegans Adaptin, smal... 151 6e-37
AC025721-3|AAM15614.1| 192|Caenorhabditis elegans Adaptin, smal... 110 8e-25
AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin, mu/m... 44 1e-04
Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical pr... 43 2e-04
L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein ( Caeno... 43 2e-04
U21309-2|AAN73882.1| 515|Caenorhabditis elegans Hypothetical pr... 36 0.026
AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : short... 35 0.045
AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : short... 35 0.045
L26290-1|AAA27981.1| 441|Caenorhabditis elegans clathrin-associ... 33 0.24
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 30 1.3
Z92829-8|CAB07348.1| 305|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 30 1.7
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 30 1.7
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 29 2.3
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z78416-2|CAB01677.2| 583|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 29 2.3
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 29 2.3
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 29 2.3
M37232-1|AAA28119.1| 251|Caenorhabditis elegans myosin I protein. 29 2.3
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 29 2.3
Z92782-4|CAB07186.1| 367|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 3.0
U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/med... 29 3.9
Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z82070-9|CAB04916.4| 222|Caenorhabditis elegans Hypothetical pr... 28 6.9
AL132872-4|CAJ76957.2| 222|Caenorhabditis elegans Hypothetical ... 28 6.9
AF040647-4|AAY55829.1| 152|Caenorhabditis elegans Hypothetical ... 28 6.9
AC084159-12|ABO16466.1| 377|Caenorhabditis elegans F-box a prot... 28 6.9
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 27 9.1
>U53340-2|AAA96207.1| 142|Caenorhabditis elegans Ap-2 small chain
(clathrin associatedcomplex) protein 2 protein.
Length = 142
Score = 290 bits (712), Expect = 5e-79
Identities = 136/142 (95%), Positives = 138/142 (97%)
Frame = +1
Query: 76 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYR 255
MIRFILIQNRAGKTRLAKWYM+FDDDEKQKLIEEVHA VTVRDAKHTNFVEFRNFKIVYR
Sbjct: 1 MIRFILIQNRAGKTRLAKWYMHFDDDEKQKLIEEVHACVTVRDAKHTNFVEFRNFKIVYR 60
Query: 256 RYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLA 435
RYAGLYFCICVD+ DNNL YLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLA
Sbjct: 61 RYAGLYFCICVDITDNNLYYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLA 120
Query: 436 GEIRETSQTKVLKQLLMLNSLE 501
GEIRETSQTKVLKQLLML SLE
Sbjct: 121 GEIRETSQTKVLKQLLMLTSLE 142
>AF016440-4|AAB65902.1| 157|Caenorhabditis elegans Adaptin, small
chain (clathrinassociated complex) protein 1 protein.
Length = 157
Score = 151 bits (365), Expect = 6e-37
Identities = 64/135 (47%), Positives = 97/135 (71%)
Frame = +1
Query: 76 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYR 255
M++++L+ +R GK RL KWY + D +K+K+ E+ + R K F+E+++ K+VY+
Sbjct: 1 MMQYMLLFSRQGKLRLQKWYTAYPDKQKKKICRELITQILARKPKMCAFLEYKDLKVVYK 60
Query: 256 RYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLA 435
RYA LYFC ++ NDN L LE IH +VE+L++YF +VCELD++FNF K Y ++DE LA
Sbjct: 61 RYASLYFCCAIEQNDNELITLEVIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLA 120
Query: 436 GEIRETSQTKVLKQL 480
GEI+ETS+ +VLK +
Sbjct: 121 GEIQETSKKQVLKAI 135
>AC025721-3|AAM15614.1| 192|Caenorhabditis elegans Adaptin, small
chain (clathrinassociated complex) protein 3 protein.
Length = 192
Score = 110 bits (265), Expect = 8e-25
Identities = 51/141 (36%), Positives = 91/141 (64%), Gaps = 6/141 (4%)
Frame = +1
Query: 76 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEF------RN 237
MI+ IL+ N GK RL K+Y ++ ++++Q+++ E +V+ RD NF+E +
Sbjct: 1 MIKAILVINNHGKPRLLKFYQHYPEEKQQQIVRETFQLVSKRDDNVCNFLEGGTLIDGND 60
Query: 238 FKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVV 417
++++YR YA LYF CVD +++ L L+ I FVE L+ F NVCELDL+F+ +V+ ++
Sbjct: 61 YRLIYRHYATLYFIFCVDSSESELGILDLIQVFVETLDRCFENVCELDLIFHVDRVHHIL 120
Query: 418 DEMFLAGEIRETSQTKVLKQL 480
E+ + G + ET+ ++L+++
Sbjct: 121 GEIVMGGMVLETNMNEILQRI 141
>AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin,
mu/medium chain (clathrinassociated complex) protein 1
protein.
Length = 426
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/78 (30%), Positives = 41/78 (52%)
Frame = +1
Query: 250 YRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMF 429
Y +Y +Y N N + L A++ VEV EYF + E + NF +Y + DEM
Sbjct: 59 YIKYMNVYLVTISKKNTNVILVLSALYKIVEVFCEYFKTLEEEAVRDNFVIIYELFDEML 118
Query: 430 LAGEIRETSQTKVLKQLL 483
G +T+++K+L++ +
Sbjct: 119 DFG-YPQTTESKILQEFI 135
>Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical
protein K11D2.3a protein.
Length = 422
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/133 (21%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Frame = +1
Query: 88 ILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRD-AKHTNFVEFRNFKIVYRRYA 264
+ I + GKT +++ Y D + + + +H ++ + + +++ V+ ++
Sbjct: 6 MFILDLKGKTIISRNYRG--DIDMTAIDKFIHLLMEKEEEGSAAPVLTYQDTNFVFIKHT 63
Query: 265 GLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEI 444
+Y N N L ++ VEV +EYF +V E + NF +Y ++DEM G
Sbjct: 64 NIYLVSACRSNVNVTMILSFLYKCVEVFSEYFKDVEEESVRDNFVVIYELLDEMMDFG-F 122
Query: 445 RETSQTKVLKQLL 483
+T+++++L++ +
Sbjct: 123 PQTTESRILQEYI 135
>L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein (
Caenorhabditis elegans(unc-101) mRNA, complete cds. ).
Length = 422
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/133 (21%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Frame = +1
Query: 88 ILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRD-AKHTNFVEFRNFKIVYRRYA 264
+ I + GKT +++ Y D + + + +H ++ + + +++ V+ ++
Sbjct: 6 MFILDLKGKTIISRNYRG--DIDMTAIDKFIHLLMEKEEEGSAAPVLTYQDTNFVFIKHT 63
Query: 265 GLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEI 444
+Y N N L ++ VEV +EYF +V E + NF +Y ++DEM G
Sbjct: 64 NIYLVSACRSNVNVTMILSFLYKCVEVFSEYFKDVEEESVRDNFVVIYELLDEMMDFG-F 122
Query: 445 RETSQTKVLKQLL 483
+T+++++L++ +
Sbjct: 123 PQTTESRILQEYI 135
>U21309-2|AAN73882.1| 515|Caenorhabditis elegans Hypothetical
protein C13B9.3 protein.
Length = 515
Score = 35.9 bits (79), Expect = 0.026
Identities = 26/98 (26%), Positives = 46/98 (46%)
Frame = +1
Query: 208 KHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLV 387
+HT FVE + + VY +Y + N N L LE + FV V+ EY + E +++
Sbjct: 51 QHT-FVETDSVRYVYHPLDNIYLVLVTTKNSNILEDLETLRLFVRVIPEYCRSNEEKEIL 109
Query: 388 FNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLNSLE 501
+ + + DE+ G RE+ ++ ++S E
Sbjct: 110 AHDFDLIFAFDEVVTLG-YRESVNLAQIRTFTEMDSHE 146
>AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform b protein.
Length = 435
Score = 35.1 bits (77), Expect = 0.045
Identities = 24/127 (18%), Positives = 50/127 (39%), Gaps = 1/127 (0%)
Frame = +1
Query: 76 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHA-VVTVRDAKHTNFVEFRNFKIVY 252
MI + + N G+ +++ Y DD + ++ V+ R + +
Sbjct: 1 MIGGLFVYNHKGEVLISRIYR---DDVTRNAVDAFRVNVIHARQQVRSPVTNMARTSFFH 57
Query: 253 RRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFL 432
+ ++ C N N E + F + + YF + E ++ NF +Y ++DE+
Sbjct: 58 VKRGNVWICAVTRQNVNAAMVFEFLKRFADTMQSYFGKLNEENVKNNFVLIYELLDEILD 117
Query: 433 AGEIRET 453
G + T
Sbjct: 118 FGYPQNT 124
>AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform a protein.
Length = 441
Score = 35.1 bits (77), Expect = 0.045
Identities = 24/127 (18%), Positives = 50/127 (39%), Gaps = 1/127 (0%)
Frame = +1
Query: 76 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHA-VVTVRDAKHTNFVEFRNFKIVY 252
MI + + N G+ +++ Y DD + ++ V+ R + +
Sbjct: 1 MIGGLFVYNHKGEVLISRIYR---DDVTRNAVDAFRVNVIHARQQVRSPVTNMARTSFFH 57
Query: 253 RRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFL 432
+ ++ C N N E + F + + YF + E ++ NF +Y ++DE+
Sbjct: 58 VKRGNVWICAVTRQNVNAAMVFEFLKRFADTMQSYFGKLNEENVKNNFVLIYELLDEILD 117
Query: 433 AGEIRET 453
G + T
Sbjct: 118 FGYPQNT 124
>L26290-1|AAA27981.1| 441|Caenorhabditis elegans
clathrin-associated protein homologueprotein.
Length = 441
Score = 32.7 bits (71), Expect = 0.24
Identities = 23/127 (18%), Positives = 49/127 (38%), Gaps = 1/127 (0%)
Frame = +1
Query: 76 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHA-VVTVRDAKHTNFVEFRNFKIVY 252
MI + + N G+ +++ Y DD + ++ V+ R + +
Sbjct: 1 MIGGLFVYNHKGEVLISRIYR---DDVTRNAVDAFRVNVIHARQQVRSPVTNMARTSFFH 57
Query: 253 RRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFL 432
+ ++ C N N + F + + YF + E ++ NF +Y ++DE+
Sbjct: 58 VKRGNVWICAVTRQNVNAAMVFAFLKRFADTMQSYFGKLNEENVKNNFVLIYELLDEILD 117
Query: 433 AGEIRET 453
G + T
Sbjct: 118 FGYPQNT 124
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = -1
Query: 243 LEISELDKVRVFRVSDGDDCMHFFYQLLFFVIIKIHIPFRKSS 115
+E L+K RV SDGD H FYQ+L H F K S
Sbjct: 248 IECYLLEKSRVVFQSDGDRNFHIFYQMLSNYFDNPHKSFLKLS 290
>Z92829-8|CAB07348.1| 305|Caenorhabditis elegans Hypothetical
protein F10A3.12 protein.
Length = 305
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Frame = -2
Query: 311 HKLLSFT-STHIQKYRPAYLLYTILKFLNSTKFVCFASLTVTTACTXXXXXXXXXXXXFI 135
+K L F ST++ + +++L+TIL +KF SL +C+ F+
Sbjct: 43 YKYLMFAFSTNLHITKTSFILFTILDDSGFSKFTGLISLVF--SCSFYGMIMTMLAIHFL 100
Query: 134 YHFASRVLPA--------RFWIKMNLIIFTFSYGFFFKYY 39
Y + S V P+ RF + L+I F+ FF YY
Sbjct: 101 YRYVSVVRPSDIEIFAPKRFHLWALLLISNFATWFFCFYY 140
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical
protein K12F2.1 protein.
Length = 1969
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 228 LDKVRVFRVSDGDDCMHFFYQLL 160
L+K RV R + G+ C H FYQ++
Sbjct: 271 LEKSRVVRQAPGERCYHIFYQIM 293
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain
3 protein.
Length = 1969
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 228 LDKVRVFRVSDGDDCMHFFYQLL 160
L+K RV R + G+ C H FYQ++
Sbjct: 271 LEKSRVVRQAPGERCYHIFYQIM 293
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 228 LDKVRVFRVSDGDDCMHFFYQL 163
L+K RV R + G+ C H FYQ+
Sbjct: 266 LEKSRVIRQAPGERCYHIFYQI 287
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 228 LDKVRVFRVSDGDDCMHFFYQL 163
L+K RV R + G+ C H FYQ+
Sbjct: 266 LEKSRVIRQAPGERCYHIFYQI 287
>Z78416-2|CAB01677.2| 583|Caenorhabditis elegans Hypothetical
protein C23H4.2 protein.
Length = 583
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 133 YMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFR-NFKIVYRRYAGLYFCIC 285
Y NFD +QKL++ H ++ D + FR + I+Y+ + L +C
Sbjct: 512 YQNFDAKNQQKLVDSTHFIINTTD----QAIIFRTDISILYQWWFYLIIAVC 559
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 228 LDKVRVFRVSDGDDCMHFFYQL 163
L+K RV R + G+ C H FYQ+
Sbjct: 266 LEKSRVIRQAPGERCYHIFYQI 287
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 228 LDKVRVFRVSDGDDCMHFFYQL 163
L+K RV R + G+ C H FYQ+
Sbjct: 266 LEKSRVIRQAPGERCYHIFYQI 287
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 228 LDKVRVFRVSDGDDCMHFFYQL 163
L+K RV R + G+ C H FYQ+
Sbjct: 266 LEKSRVIRQAPGERCYHIFYQI 287
>M37232-1|AAA28119.1| 251|Caenorhabditis elegans myosin I protein.
Length = 251
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 228 LDKVRVFRVSDGDDCMHFFYQL 163
L+K RV R + G+ C H FYQ+
Sbjct: 152 LEKSRVIRQAPGERCYHIFYQI 173
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 228 LDKVRVFRVSDGDDCMHFFYQL 163
L+K RV R + G+ C H FYQ+
Sbjct: 269 LEKSRVIRQAPGERCYHIFYQI 290
>Z92782-4|CAB07186.1| 367|Caenorhabditis elegans Hypothetical
protein F14F8.5 protein.
Length = 367
Score = 29.1 bits (62), Expect = 3.0
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = -1
Query: 366 IMEIFI*DLDKVMYGL-EITQIVIIYIDTYTEVQTCIPPVYYLEISELDKVRVFRVSDGD 190
++ I I DL ++++ + I+ I+ I ++ TCIPP+ YLE+ + + D
Sbjct: 62 LIGIAICDLFRMIFTIVTISPIIYREILSFCIPVTCIPPLSYLEMYFIQLFNSLEIILTD 121
Query: 189 DCMHFFYQLLFFVIIKIHIPFRK--SSLACS 103
+ F + F + I P K SSL S
Sbjct: 122 LSVWFVVFMTIFRALVIRYPLNKRISSLVTS 152
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 228 LDKVRVFRVSDGDDCMHFFYQL 163
L+K RV R + G+ C H FYQ+
Sbjct: 272 LEKSRVIRQAPGERCYHIFYQV 293
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 228 LDKVRVFRVSDGDDCMHFFYQL 163
L+K RV R + G+ C H FYQ+
Sbjct: 272 LEKSRVIRQAPGERCYHIFYQV 293
>U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/medium
chain (clathrinassociated complex) protein 3 protein.
Length = 414
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/53 (22%), Positives = 24/53 (45%)
Frame = +1
Query: 268 LYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEM 426
L+ + V L +E +H ++ +YF + + N V+ ++DEM
Sbjct: 64 LFLVAVITVETPPLMVIEFLHRVIQTFTQYFDEFSDSSMKENCVMVFELLDEM 116
>Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical
protein R09D1.3 protein.
Length = 435
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 112 KTRLAKWYMNFD--DDEKQKLIEEVHAVVTVRDAKHTNFVEFRN 237
K R+ +Y +D D K +L + HAV D K+ ++F+N
Sbjct: 75 KRRIVGYYSEYDSTDISKNQLAKLTHAVFAFVDIKYDGTLQFKN 118
>Z82070-9|CAB04916.4| 222|Caenorhabditis elegans Hypothetical
protein W04E12.7 protein.
Length = 222
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +1
Query: 133 YMNFDDDEKQK-LIEEVHAVVTVRD 204
Y NF+DD+ ++ +IE H VVTV D
Sbjct: 20 YPNFEDDDMERYVIENSHDVVTVFD 44
>AL132872-4|CAJ76957.2| 222|Caenorhabditis elegans Hypothetical
protein W04E12.7 protein.
Length = 222
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +1
Query: 133 YMNFDDDEKQK-LIEEVHAVVTVRD 204
Y NF+DD+ ++ +IE H VVTV D
Sbjct: 20 YPNFEDDDMERYVIENSHDVVTVFD 44
>AF040647-4|AAY55829.1| 152|Caenorhabditis elegans Hypothetical
protein F54D12.10 protein.
Length = 152
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 277 CICVDVNDNNLCYLEAIHNFVEVLNE 354
CI V N N CYL A+ + ++V N+
Sbjct: 56 CILVHSNSLNRCYLYAVGDIIQVRND 81
>AC084159-12|ABO16466.1| 377|Caenorhabditis elegans F-box a protein
protein 222 protein.
Length = 377
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 181 HAVVTVRDAKHTNFVEFRNFKIVYRRYAG 267
H+ V+ R + F+EF +IVYR + G
Sbjct: 114 HSAVSFRMCRDWTFLEFSKHEIVYREFEG 142
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = -3
Query: 343 PRQSYVWPRDNTNCYHLHRHIYRSTDLHTSCILS*NF*TRQSSCVSXXXXXXXXXXXLST 164
P+QS +W TNC +L ST L ++ +L+ TR+SS + ST
Sbjct: 274 PQQSMLW----TNCSNLSTTTSSSTMLSSTTLLTTETETRESSS-TGSTQTTTPSTEPST 328
Query: 163 SVFRHHQNSYTISQVE 116
++ + S T+S V+
Sbjct: 329 TITTPMEQSSTVSSVQ 344
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,077,674
Number of Sequences: 27780
Number of extensions: 322872
Number of successful extensions: 1087
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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