Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10g12
         (669 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    22   4.6  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   4.6  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    22   6.1  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   8.0  

>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 141 IHIPFRKSSLACSVLDQNESYHF 73
           I +  R+SSL C V   NES  +
Sbjct: 375 IDVSRRRSSLICDVYGVNESVSY 397


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 419 TKCFWLVRSGRHPKLKCS 472
           +KC W + S     LKCS
Sbjct: 68  SKCTWTITSYHRINLKCS 85


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -2

Query: 542 YKNILYTKNNTNTYSK 495
           Y N  Y  NN N Y K
Sbjct: 101 YNNYNYNNNNYNNYKK 116


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +1

Query: 316 LEAIHNFVEVLNEYFHNVCELDLVFNF 396
           L  IH+  + LN+ +  +C+ + ++NF
Sbjct: 76  LNKIHDAYKDLNQRYGALCKEEALWNF 102


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,594
Number of Sequences: 438
Number of extensions: 4260
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)