Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10g09
         (618 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    25   0.59 
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    24   1.4  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   3.2  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   4.2  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    21   7.3  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 489 MNKKSNWMFVDSDFQDKVRRRTRLNSG 409
           +N    W ++D DF +  RR+  + SG
Sbjct: 36  LNVIHKWKYLDYDFDNDERRQAAIQSG 62


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 486 NKKSNWMFVDSDFQDKVRRRTRLNSGPDHRIMMRM 382
           N   NW+  +    D+VR  TR     DH IM+ M
Sbjct: 350 NNVPNWVMGN---HDRVRVGTRYPGRADHMIMLEM 381


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 12  NWVDYVMAG*MFSAIDISVLILNYAVNEIVST 107
           NW D V+AG +F+ + I  ++ N  V   V T
Sbjct: 34  NWTDLVLAG-LFTMLIIVTIVGNTLVIAAVIT 64


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = -3

Query: 193 EGPFATFSALELFKKRSLTHKYPYF*TI 110
           +GPF       + K +++ +++P F T+
Sbjct: 299 QGPFTAEEVNYMLKAKNMENRFPLFTTV 326


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 370 ETLIHSHHDAMVRPTVKP 423
           E++ H HH+ +V   +KP
Sbjct: 20  ESVHHCHHNGVVHRDLKP 37


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,141
Number of Sequences: 438
Number of extensions: 3780
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)