Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10g08
         (601 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    23   1.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   6.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.9  

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 62  VKFGCTEHYLFGCVKCE 12
           +K G TE    GCVKCE
Sbjct: 58  LKKGITETMKNGCVKCE 74


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 344 LYRQWRRRLVYLYHKFYAIKMTPK 415
           L +  +RR V L  K  AIK +PK
Sbjct: 584 LLQSIKRRYVLLNEKVEAIKTSPK 607


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 469 LEEARKAGTAPAAVDETGKDINPHIPQY 552
           +EEA KAG     +D    DI   I  +
Sbjct: 584 IEEANKAGELIHKIDTEDHDIRDEIEMF 611


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 469 LEEARKAGTAPAAVDETGKDINPHIPQY 552
           +EEA KAG     +D    DI   I  +
Sbjct: 309 IEEANKAGELIHKIDTEDHDIRDEIEMF 336


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short
          gastrulation protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -3

Query: 26 CVKCECV 6
          C+KCECV
Sbjct: 62 CMKCECV 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,726
Number of Sequences: 336
Number of extensions: 2428
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)