Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10g06
         (619 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.13 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.67 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.6  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   2.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.1  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   4.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -3

Query: 119 LFFFCKSFVVLSRHFY 72
           +++FC++F++   HFY
Sbjct: 298 IYYFCRAFIIFPTHFY 313


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.67
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 308  VGKSQQPGASCRY*DKPNNCGAYFQ 234
            V K  QP    +Y   P+NC AY++
Sbjct: 1096 VDKPSQPCEPGQYVPDPHNCNAYYR 1120


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 421 RTKESCGKRMRWQ 459
           R K+ C KRM+W+
Sbjct: 3   RRKQDCPKRMKWE 15


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -3

Query: 452 LILFPQDSFVLFFSAHFFIISK 387
           LI   +D+F  F++A FF+I++
Sbjct: 308 LISTIKDNFPRFYAARFFVINR 329


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -3

Query: 452 LILFPQDSFVLFFSAHFFIISK 387
           LI   +D+F  F++A FF+I++
Sbjct: 308 LISTIKDNFPRFYAARFFVINR 329


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 13/51 (25%), Positives = 22/51 (43%)
 Frame = -3

Query: 518 DNSQEKCVIVEN*VCGSFIICHLILFPQDSFVLFFSAHFFIISKLPGHFTG 366
           +N   KC++V +       I     FP    +L  + +F  +SK+  H  G
Sbjct: 194 NNDGTKCLVVTD----EASISDAPFFPHRGLLLDTARNFLTVSKIKKHIDG 240


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +3

Query: 414  KEKDERILWKKNEVADYEATTYSIFYNNALFLTIVIL 524
            + K+E+    K  +     + ++ F  NALF+ +V L
Sbjct: 1249 ENKEEKARIAKELIELRNKSVFAFFMFNALFVLVVFL 1285


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +3

Query: 414  KEKDERILWKKNEVADYEATTYSIFYNNALFLTIVIL 524
            + K+E+    K  +     + ++ F  NALF+ +V L
Sbjct: 1249 ENKEEKARIAKELIELRNKSVFAFFMFNALFVLVVFL 1285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,106
Number of Sequences: 336
Number of extensions: 3262
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)