Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10g05
(643 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC019320-1|AAH19320.2| 427|Homo sapiens pseudouridylate synthas... 107 3e-23
BC009505-1|AAH09505.2| 427|Homo sapiens pseudouridylate synthas... 107 3e-23
BC002901-1|AAH02901.1| 399|Homo sapiens pseudouridylate synthas... 107 3e-23
AF116238-1|AAD21042.1| 365|Homo sapiens pseudouridine synthase ... 107 3e-23
AK055702-1|BAB70990.1| 481|Homo sapiens protein ( Homo sapiens ... 39 0.013
BC004822-1|AAH04822.1| 481|Homo sapiens pseudouridylate synthas... 38 0.023
AB027122-1|BAB47149.1| 225|Homo sapiens HEIL2 protein. 33 1.1
J03250-1|AAA61207.1| 765|Homo sapiens TOP1 protein. 32 1.5
U07806-1|AAB60380.1| 761|Homo sapiens DNA topoisomerase I protein. 31 4.6
U07804-1|AAB60379.1| 761|Homo sapiens DNA topoisomerase I protein. 31 4.6
M60706-1|AAA61206.1| 765|Homo sapiens topoisomerase I protein. 31 4.6
BC092404-1|AAH92404.1| 881|Homo sapiens Rap guanine nucleotide ... 31 4.6
AL035652-1|CAI19767.1| 765|Homo sapiens topoisomerase (DNA) I p... 31 4.6
AL022394-1|CAI42886.1| 765|Homo sapiens topoisomerase (DNA) I p... 31 4.6
U78168-1|AAD12740.1| 881|Homo sapiens cAMP-regulated guanine nu... 30 6.1
BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein. 30 6.1
BC110624-1|AAI10625.1| 664|Homo sapiens zinc finger protein 800... 30 6.1
BC110623-1|AAI10624.1| 664|Homo sapiens zinc finger protein 800... 30 6.1
BC047641-1|AAH47641.1| 258|Homo sapiens ZNF800 protein protein. 30 6.1
BC037348-1|AAH37348.1| 158|Homo sapiens ZNF800 protein protein. 30 6.1
BC017728-1|AAH17728.1| 881|Homo sapiens Rap guanine nucleotide ... 30 6.1
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 30 6.1
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 30 6.1
AF218032-1|AAG17274.1| 337|Homo sapiens unknown protein. 30 6.1
AF103905-1|AAC83381.1| 881|Homo sapiens Rap1 guanine-nucleotide... 30 6.1
X14298-1|CAA32479.1| 3685|Homo sapiens protein ( Human mRNA for ... 30 8.0
M18533-1|AAA53189.1| 3685|Homo sapiens dystrophin protein. 30 8.0
BC036103-1|AAH36103.1| 772|Homo sapiens DMD protein protein. 30 8.0
BC009242-1|AAH09242.1| 462|Homo sapiens DMD protein protein. 30 8.0
AL451144-5|CAI39567.1| 719|Homo sapiens dystrophin (muscular dy... 30 8.0
AL451144-4|CAI39566.1| 3685|Homo sapiens dystrophin (muscular dy... 30 8.0
AL451144-1|CAI39563.1| 772|Homo sapiens dystrophin (muscular dy... 30 8.0
AL139278-1|CAI42991.1| 3685|Homo sapiens dystrophin (muscular dy... 30 8.0
AL109609-3|CAI42950.1| 3685|Homo sapiens dystrophin (muscular dy... 30 8.0
AL096699-3|CAI42226.1| 719|Homo sapiens dystrophin (muscular dy... 30 8.0
AL096699-2|CAI42225.1| 3685|Homo sapiens dystrophin (muscular dy... 30 8.0
AL096699-1|CAI42224.1| 772|Homo sapiens dystrophin (muscular dy... 30 8.0
AL050305-1|CAI42099.1| 772|Homo sapiens dystrophin (muscular dy... 30 8.0
AL049643-1|CAI43007.1| 719|Homo sapiens dystrophin (muscular dy... 30 8.0
AL031643-3|CAI43058.1| 3685|Homo sapiens dystrophin (muscular dy... 30 8.0
AL031542-3|CAI42230.1| 719|Homo sapiens dystrophin (muscular dy... 30 8.0
AL031542-2|CAI42229.1| 3685|Homo sapiens dystrophin (muscular dy... 30 8.0
AL031542-1|CAI42228.1| 772|Homo sapiens dystrophin (muscular dy... 30 8.0
AF213411-1|AAL61559.1| 60|Homo sapiens dystrophin protein. 30 8.0
>BC019320-1|AAH19320.2| 427|Homo sapiens pseudouridylate synthase 1
protein.
Length = 427
Score = 107 bits (258), Expect = 3e-23
Identities = 58/130 (44%), Positives = 82/130 (63%), Gaps = 4/130 (3%)
Frame = +2
Query: 266 ERIKRKKMAMLLGYSGVEYYGMQRNPG---VQTIXXXXXXXXXXXXYITQEDFENAQNAQ 436
E+ ++K+ +L+ YSG Y+GMQRN G +TI I + E+ +
Sbjct: 79 EKPPKRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMS 138
Query: 437 FQRSSRTDKGVSAAEQVVSLKLPLEVNV-EEINKRLPETIKVFAVKRVTNRFNSKSKCNA 613
FQR +RTDKGVSAA QVVSLK+ L ++ E+IN LP I++ +KRVT FNSK++C+A
Sbjct: 139 FQRCARTDKGVSAAGQVVSLKVWLIDDILEKINSHLPSHIRILGLKRVTGGFNSKNRCDA 198
Query: 614 RSYSYTLPTY 643
R+Y Y LPT+
Sbjct: 199 RTYCYLLPTF 208
>BC009505-1|AAH09505.2| 427|Homo sapiens pseudouridylate synthase 1
protein.
Length = 427
Score = 107 bits (258), Expect = 3e-23
Identities = 58/130 (44%), Positives = 82/130 (63%), Gaps = 4/130 (3%)
Frame = +2
Query: 266 ERIKRKKMAMLLGYSGVEYYGMQRNPG---VQTIXXXXXXXXXXXXYITQEDFENAQNAQ 436
E+ ++K+ +L+ YSG Y+GMQRN G +TI I + E+ +
Sbjct: 79 EKPPKRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMS 138
Query: 437 FQRSSRTDKGVSAAEQVVSLKLPLEVNV-EEINKRLPETIKVFAVKRVTNRFNSKSKCNA 613
FQR +RTDKGVSAA QVVSLK+ L ++ E+IN LP I++ +KRVT FNSK++C+A
Sbjct: 139 FQRCARTDKGVSAAGQVVSLKVWLIDDILEKINSHLPSHIRILGLKRVTGGFNSKNRCDA 198
Query: 614 RSYSYTLPTY 643
R+Y Y LPT+
Sbjct: 199 RTYCYLLPTF 208
>BC002901-1|AAH02901.1| 399|Homo sapiens pseudouridylate synthase 1
protein.
Length = 399
Score = 107 bits (258), Expect = 3e-23
Identities = 58/130 (44%), Positives = 82/130 (63%), Gaps = 4/130 (3%)
Frame = +2
Query: 266 ERIKRKKMAMLLGYSGVEYYGMQRNPG---VQTIXXXXXXXXXXXXYITQEDFENAQNAQ 436
E+ ++K+ +L+ YSG Y+GMQRN G +TI I + E+ +
Sbjct: 51 EKPPKRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMS 110
Query: 437 FQRSSRTDKGVSAAEQVVSLKLPLEVNV-EEINKRLPETIKVFAVKRVTNRFNSKSKCNA 613
FQR +RTDKGVSAA QVVSLK+ L ++ E+IN LP I++ +KRVT FNSK++C+A
Sbjct: 111 FQRCARTDKGVSAAGQVVSLKVWLIDDILEKINSHLPSHIRILGLKRVTGGFNSKNRCDA 170
Query: 614 RSYSYTLPTY 643
R+Y Y LPT+
Sbjct: 171 RTYCYLLPTF 180
>AF116238-1|AAD21042.1| 365|Homo sapiens pseudouridine synthase 1
protein.
Length = 365
Score = 107 bits (258), Expect = 3e-23
Identities = 58/130 (44%), Positives = 82/130 (63%), Gaps = 4/130 (3%)
Frame = +2
Query: 266 ERIKRKKMAMLLGYSGVEYYGMQRNPG---VQTIXXXXXXXXXXXXYITQEDFENAQNAQ 436
E+ ++K+ +L+ YSG Y+GMQRN G +TI I + E+ +
Sbjct: 17 EKPPKRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMS 76
Query: 437 FQRSSRTDKGVSAAEQVVSLKLPLEVNV-EEINKRLPETIKVFAVKRVTNRFNSKSKCNA 613
FQR +RTDKGVSAA QVVSLK+ L ++ E+IN LP I++ +KRVT FNSK++C+A
Sbjct: 77 FQRCARTDKGVSAAGQVVSLKVWLIDDILEKINSHLPSHIRILGLKRVTGGFNSKNRCDA 136
Query: 614 RSYSYTLPTY 643
R+Y Y LPT+
Sbjct: 137 RTYCYLLPTF 146
>AK055702-1|BAB70990.1| 481|Homo sapiens protein ( Homo sapiens
cDNA FLJ31140 fis, clone IMR322001218, highly similar to
Mus musculus pseudouridine synthase 3 (Pus3) mRNA. ).
Length = 481
Score = 39.1 bits (87), Expect = 0.013
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 23/97 (23%)
Frame = +2
Query: 416 ENAQNAQFQRSSRTDKGVSAAEQVVSLKL---------PLEVNVEE-------------- 526
E+ Q + + R RTDKGVSA QV+SL L ++NV+E
Sbjct: 104 ESRQTSNYHRCGRTDKGVSAFGQVISLDLRSQFPRGRDSEDLNVKEEANAAAEEIRYTHI 163
Query: 527 INKRLPETIKVFAVKRVTNRFNSKSKCNARSYSYTLP 637
+N+ LP I++ A V F+++ C R+Y Y P
Sbjct: 164 LNRVLPPDIRILAWAPVEPSFSARFSCLERTYRYFFP 200
>BC004822-1|AAH04822.1| 481|Homo sapiens pseudouridylate synthase 3
protein.
Length = 481
Score = 38.3 bits (85), Expect = 0.023
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 23/97 (23%)
Frame = +2
Query: 416 ENAQNAQFQRSSRTDKGVSAAEQVVSLKL---------PLEVNVEE-------------- 526
E+ Q + + R RTDKGVSA QV+SL L + NV+E
Sbjct: 104 ESRQTSNYHRCGRTDKGVSAFGQVISLDLRSQFPRGRDSEDFNVKEEANAAAEEIRYTHI 163
Query: 527 INKRLPETIKVFAVKRVTNRFNSKSKCNARSYSYTLP 637
+N+ LP I++ A V F+++ C R+Y Y P
Sbjct: 164 LNRVLPPDIRILAWAPVEPSFSARFSCLERTYRYFFP 200
>AB027122-1|BAB47149.1| 225|Homo sapiens HEIL2 protein.
Length = 225
Score = 32.7 bits (71), Expect = 1.1
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -3
Query: 173 YRLTYFLHLSLRRQLPLRTASVRLLWLKYFFMNSHAFLVCNYPLVL 36
+RL + +H S L ++ + LWL Y+F S AF + ++ L L
Sbjct: 148 FRLNFHVHHSTESTLLKNSSDLPCLWLNYYFNLSAAFYIFDHSLFL 193
>J03250-1|AAA61207.1| 765|Homo sapiens TOP1 protein.
Length = 765
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 146 KDEENKSIDIVPNKLLTRYNKRRAHRDWETKPPGEIKKPYERIKRKKM 289
+DE++ +D P K+ T K+ R E + G++KKP + K KK+
Sbjct: 140 RDEDD--VDYKPKKIKTEDTKKEKKRKLEEEEDGKLKKPKNKDKDKKV 185
>U07806-1|AAB60380.1| 761|Homo sapiens DNA topoisomerase I protein.
Length = 761
Score = 30.7 bits (66), Expect = 4.6
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 146 KDEENKSIDIVPNKLLTRYNKRRAHRDWETKPPGEIKKPYERIKRKKM 289
+DE++ D P K+ T K+ R E + G++KKP + K KK+
Sbjct: 136 RDEDDA--DYKPKKIKTEDTKKEKKRKLEEEEDGKLKKPKNKDKDKKV 181
>U07804-1|AAB60379.1| 761|Homo sapiens DNA topoisomerase I protein.
Length = 761
Score = 30.7 bits (66), Expect = 4.6
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 146 KDEENKSIDIVPNKLLTRYNKRRAHRDWETKPPGEIKKPYERIKRKKM 289
+DE++ D P K+ T K+ R E + G++KKP + K KK+
Sbjct: 136 RDEDDA--DYKPKKIKTEDTKKEKKRKLEEEEDGKLKKPKNKDKDKKV 181
>M60706-1|AAA61206.1| 765|Homo sapiens topoisomerase I protein.
Length = 765
Score = 30.7 bits (66), Expect = 4.6
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 146 KDEENKSIDIVPNKLLTRYNKRRAHRDWETKPPGEIKKPYERIKRKKM 289
+DE++ D P K+ T K+ R E + G++KKP + K KK+
Sbjct: 140 RDEDDA--DYKPKKIKTEDTKKEKKRKLEEEEDGKLKKPKNKDKDKKV 185
>BC092404-1|AAH92404.1| 881|Homo sapiens Rap guanine nucleotide
exchange factor (GEF) 3 protein.
Length = 881
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 245 LEVWSPNRD--VPGVCCTSLIAYSALYRLTYFLHLSLRRQLPLRTASVR 105
L VW PN+D +PG C + Y + H L QLP+ TASVR
Sbjct: 494 LPVWLPNQDEPLPGSSCAIQVGDKVPYDICRPDHSVLTMQLPV-TASVR 541
>AL035652-1|CAI19767.1| 765|Homo sapiens topoisomerase (DNA) I
protein.
Length = 765
Score = 30.7 bits (66), Expect = 4.6
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 146 KDEENKSIDIVPNKLLTRYNKRRAHRDWETKPPGEIKKPYERIKRKKM 289
+DE++ D P K+ T K+ R E + G++KKP + K KK+
Sbjct: 140 RDEDDA--DYKPKKIKTEDTKKEKKRKLEEEEDGKLKKPKNKDKDKKV 185
>AL022394-1|CAI42886.1| 765|Homo sapiens topoisomerase (DNA) I
protein.
Length = 765
Score = 30.7 bits (66), Expect = 4.6
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 146 KDEENKSIDIVPNKLLTRYNKRRAHRDWETKPPGEIKKPYERIKRKKM 289
+DE++ D P K+ T K+ R E + G++KKP + K KK+
Sbjct: 140 RDEDDA--DYKPKKIKTEDTKKEKKRKLEEEEDGKLKKPKNKDKDKKV 185
>U78168-1|AAD12740.1| 881|Homo sapiens cAMP-regulated guanine
nucleotide exchange factor I protein.
Length = 881
Score = 30.3 bits (65), Expect = 6.1
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 245 LEVWSPNRD--VPGVCCTSLIAYSALYRLTYFLHLSLRRQLPLRTASVR 105
L VW PN+D +PG C + Y + H L QLP+ TASVR
Sbjct: 494 LPVWLPNQDEPLPGSSCAIQVGDKVPYDICRPDHSVLTLQLPV-TASVR 541
>BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein.
Length = 1224
Score = 30.3 bits (65), Expect = 6.1
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 594 ELN-LFVTLLTANTLIVSGNLLFISSTLTSKGSLSETTCSAADTPLSVLEL 445
E+N L T + +NTL+ + S T+ SL +T S TPLS++ L
Sbjct: 146 EVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPL 196
>BC110624-1|AAI10625.1| 664|Homo sapiens zinc finger protein 800
protein.
Length = 664
Score = 30.3 bits (65), Expect = 6.1
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 398 ITQEDFENAQNAQFQRSSRTDKGVSAAEQVVSLKLPLEVNVEEINKRLPETIKV 559
I E E QNA FQ SRTD + E S EV ++E + +T+ V
Sbjct: 131 IKLEPIETNQNAVFQYISRTDNPIEVTES-SSTPEQTEVQIQETSTEQSKTVPV 183
>BC110623-1|AAI10624.1| 664|Homo sapiens zinc finger protein 800
protein.
Length = 664
Score = 30.3 bits (65), Expect = 6.1
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 398 ITQEDFENAQNAQFQRSSRTDKGVSAAEQVVSLKLPLEVNVEEINKRLPETIKV 559
I E E QNA FQ SRTD + E S EV ++E + +T+ V
Sbjct: 131 IKLEPIETNQNAVFQYISRTDNPIEVTES-SSTPEQTEVQIQETSTEQSKTVPV 183
>BC047641-1|AAH47641.1| 258|Homo sapiens ZNF800 protein protein.
Length = 258
Score = 30.3 bits (65), Expect = 6.1
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 398 ITQEDFENAQNAQFQRSSRTDKGVSAAEQVVSLKLPLEVNVEEINKRLPETIKV 559
I E E QNA FQ SRTD + E S EV ++E + +T+ V
Sbjct: 34 IKLEPIETNQNAVFQYISRTDNPIEVTES-SSTPEQTEVQIQETSTEQSKTVPV 86
>BC037348-1|AAH37348.1| 158|Homo sapiens ZNF800 protein protein.
Length = 158
Score = 30.3 bits (65), Expect = 6.1
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 398 ITQEDFENAQNAQFQRSSRTDKGVSAAEQVVSLKLPLEVNVEEINKRLPETIKV 559
I E E QNA FQ SRTD + E S EV ++E + +T+ V
Sbjct: 30 IKLEPIETNQNAVFQYISRTDNPIEVTES-SSTPEQTEVQIQETSTEQSKTVPV 82
>BC017728-1|AAH17728.1| 881|Homo sapiens Rap guanine nucleotide
exchange factor (GEF) 3 protein.
Length = 881
Score = 30.3 bits (65), Expect = 6.1
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 245 LEVWSPNRD--VPGVCCTSLIAYSALYRLTYFLHLSLRRQLPLRTASVR 105
L VW PN+D +PG C + Y + H L QLP+ TASVR
Sbjct: 494 LPVWLPNQDEPLPGSSCAIQVGDKVPYDICRPDHSVLTLQLPV-TASVR 541
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 30.3 bits (65), Expect = 6.1
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 594 ELN-LFVTLLTANTLIVSGNLLFISSTLTSKGSLSETTCSAADTPLSVLEL 445
E+N L T + +NTL+ + S T+ SL +T S TPLS++ L
Sbjct: 3415 EVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPL 3465
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 30.3 bits (65), Expect = 6.1
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 594 ELN-LFVTLLTANTLIVSGNLLFISSTLTSKGSLSETTCSAADTPLSVLEL 445
E+N L T + +NTL+ + S T+ SL +T S TPLS++ L
Sbjct: 3415 EVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPL 3465
>AF218032-1|AAG17274.1| 337|Homo sapiens unknown protein.
Length = 337
Score = 30.3 bits (65), Expect = 6.1
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 398 ITQEDFENAQNAQFQRSSRTDKGVSAAEQVVSLKLPLEVNVEEINKRLPETIKV 559
I E E QNA FQ SRTD + E S EV ++E + +T+ V
Sbjct: 131 IKLEPIETNQNAVFQYISRTDNPIEVTES-SSTPEQTEVQIQETSTEQSKTVPV 183
>AF103905-1|AAC83381.1| 881|Homo sapiens Rap1 guanine-nucleotide
exchange factor protein.
Length = 881
Score = 30.3 bits (65), Expect = 6.1
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 245 LEVWSPNRD--VPGVCCTSLIAYSALYRLTYFLHLSLRRQLPLRTASVR 105
L VW PN+D +PG C + Y + H L QLP+ TASVR
Sbjct: 494 LPVWLPNQDEPLPGSSCAIQVGDKVPYDICRPDHSVLTLQLPV-TASVR 541
>X14298-1|CAA32479.1| 3685|Homo sapiens protein ( Human mRNA for
dystrophin. ).
Length = 3685
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 543 GNLLFISSTLTSKGSLSETTCSAADTPLSVLELRWNC 433
GN+L + S L G LSE + +++L RW C
Sbjct: 397 GNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWEC 433
>M18533-1|AAA53189.1| 3685|Homo sapiens dystrophin protein.
Length = 3685
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 543 GNLLFISSTLTSKGSLSETTCSAADTPLSVLELRWNC 433
GN+L + S L G LSE + +++L RW C
Sbjct: 397 GNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWEC 433
>BC036103-1|AAH36103.1| 772|Homo sapiens DMD protein protein.
Length = 772
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 543 GNLLFISSTLTSKGSLSETTCSAADTPLSVLELRWNC 433
GN+L + S L G LSE + +++L RW C
Sbjct: 389 GNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWEC 425
>BC009242-1|AAH09242.1| 462|Homo sapiens DMD protein protein.
Length = 462
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 543 GNLLFISSTLTSKGSLSETTCSAADTPLSVLELRWNC 433
GN+L + S L G LSE + +++L RW C
Sbjct: 389 GNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWEC 425
>AL451144-5|CAI39567.1| 719|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 719
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 543 GNLLFISSTLTSKGSLSETTCSAADTPLSVLELRWNC 433
GN+L + S L G LSE + +++L RW C
Sbjct: 393 GNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWEC 429
>AL451144-4|CAI39566.1| 3685|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 3685
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 543 GNLLFISSTLTSKGSLSETTCSAADTPLSVLELRWNC 433
GN+L + S L G LSE + +++L RW C
Sbjct: 397 GNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWEC 433
>AL451144-1|CAI39563.1| 772|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 772
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 543 GNLLFISSTLTSKGSLSETTCSAADTPLSVLELRWNC 433
GN+L + S L G LSE + +++L RW C
Sbjct: 389 GNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWEC 425
>AL139278-1|CAI42991.1| 3685|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 3685
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 543 GNLLFISSTLTSKGSLSETTCSAADTPLSVLELRWNC 433
GN+L + S L G LSE + +++L RW C
Sbjct: 397 GNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWEC 433
>AL109609-3|CAI42950.1| 3685|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 3685
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 543 GNLLFISSTLTSKGSLSETTCSAADTPLSVLELRWNC 433
GN+L + S L G LSE + +++L RW C
Sbjct: 397 GNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWEC 433
>AL096699-3|CAI42226.1| 719|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 719
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 543 GNLLFISSTLTSKGSLSETTCSAADTPLSVLELRWNC 433
GN+L + S L G LSE + +++L RW C
Sbjct: 393 GNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWEC 429
>AL096699-2|CAI42225.1| 3685|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 3685
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 543 GNLLFISSTLTSKGSLSETTCSAADTPLSVLELRWNC 433
GN+L + S L G LSE + +++L RW C
Sbjct: 397 GNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWEC 433
>AL096699-1|CAI42224.1| 772|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 772
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 543 GNLLFISSTLTSKGSLSETTCSAADTPLSVLELRWNC 433
GN+L + S L G LSE + +++L RW C
Sbjct: 389 GNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWEC 425
>AL050305-1|CAI42099.1| 772|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 772
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 543 GNLLFISSTLTSKGSLSETTCSAADTPLSVLELRWNC 433
GN+L + S L G LSE + +++L RW C
Sbjct: 389 GNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWEC 425
>AL049643-1|CAI43007.1| 719|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 719
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 543 GNLLFISSTLTSKGSLSETTCSAADTPLSVLELRWNC 433
GN+L + S L G LSE + +++L RW C
Sbjct: 393 GNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWEC 429
>AL031643-3|CAI43058.1| 3685|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 3685
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 543 GNLLFISSTLTSKGSLSETTCSAADTPLSVLELRWNC 433
GN+L + S L G LSE + +++L RW C
Sbjct: 397 GNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWEC 433
>AL031542-3|CAI42230.1| 719|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 719
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 543 GNLLFISSTLTSKGSLSETTCSAADTPLSVLELRWNC 433
GN+L + S L G LSE + +++L RW C
Sbjct: 393 GNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWEC 429
>AL031542-2|CAI42229.1| 3685|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 3685
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 543 GNLLFISSTLTSKGSLSETTCSAADTPLSVLELRWNC 433
GN+L + S L G LSE + +++L RW C
Sbjct: 397 GNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWEC 433
>AL031542-1|CAI42228.1| 772|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 772
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 543 GNLLFISSTLTSKGSLSETTCSAADTPLSVLELRWNC 433
GN+L + S L G LSE + +++L RW C
Sbjct: 389 GNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWEC 425
>AF213411-1|AAL61559.1| 60|Homo sapiens dystrophin protein.
Length = 60
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 543 GNLLFISSTLTSKGSLSETTCSAADTPLSVLELRWNC 433
GN+L + S L G LSE + +++L RW C
Sbjct: 14 GNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWEC 50
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,245,926
Number of Sequences: 237096
Number of extensions: 1864624
Number of successful extensions: 4264
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 4153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4256
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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