Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10g05
         (643 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021572-2|CAA16518.1|  415|Caenorhabditis elegans Hypothetical ...    96   2e-20
Z47075-5|CAA87378.1|  402|Caenorhabditis elegans Hypothetical pr...    40   0.001
Z81056-6|CAB02906.1|  398|Caenorhabditis elegans Hypothetical pr...    31   0.70 
Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical pr...    30   1.6  
U40959-3|AAA81767.2|  445|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AC084197-9|AAK95894.1|  322|Caenorhabditis elegans Hypothetical ...    28   4.9  

>AL021572-2|CAA16518.1|  415|Caenorhabditis elegans Hypothetical
           protein W06H3.2 protein.
          Length = 415

 Score = 95.9 bits (228), Expect = 2e-20
 Identities = 54/138 (39%), Positives = 78/138 (56%), Gaps = 6/138 (4%)
 Frame = +2

Query: 248 EIKKPYERIKRKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQ 427
           E KKP  R+K+ K AMLLGY G +YYGMQ    + TI            +IT    E   
Sbjct: 24  EPKKP--RVKQAKYAMLLGYQGKKYYGMQLQKDLPTIESKLLEAMETAGWITTAQKEKPF 81

Query: 428 NAQFQRSSRTDKGVSAAEQVVSLKLPLE------VNVEEINKRLPETIKVFAVKRVTNRF 589
           +  FQR++RTD+ VSAA Q+  ++LP +           +N  LP  I+VF ++R TN F
Sbjct: 82  DFFFQRAARTDRAVSAARQMCGMQLPRDDAKYQAEGAGILNNILPADIRVFGMRRTTNFF 141

Query: 590 NSKSKCNARSYSYTLPTY 643
           + + +C+ R+YSYT P++
Sbjct: 142 HPQKQCDHRTYSYTCPSF 159


>Z47075-5|CAA87378.1|  402|Caenorhabditis elegans Hypothetical
           protein E02H1.3 protein.
          Length = 402

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 28/146 (19%)
 Frame = +2

Query: 278 RKKMAMLLGYSGVEYYGMQRNPGVQTIXXXXXXXXXXXXYITQEDFENAQNAQFQRSSRT 457
           R+K+A+   Y G E+ G+ + P  Q              ++     E+     F R  RT
Sbjct: 29  RRKIAIQFFYLGWEHDGLVQQPHTQNTVENHIMQALIKTHL----IEDWTKCDFSRCGRT 84

Query: 458 DKGVS-----AAEQVVSL-----------------KLPLEVNVEEI------NKRLPETI 553
           DKGVS     AA  V SL                 K+  + + EE+      N  LP+TI
Sbjct: 85  DKGVSAFKQTAAMVVRSLCPGDSGVFWSDSTQEHQKVDYKASGEELPYVKMLNGVLPKTI 144

Query: 554 KVFAVKRVTNRFNSKSKCNARSYSYT 631
           +VFA   V   FN++  CN R+Y Y+
Sbjct: 145 RVFAWAPVAQTFNARFDCNRRTYKYS 170


>Z81056-6|CAB02906.1|  398|Caenorhabditis elegans Hypothetical
           protein F09F3.10 protein.
          Length = 398

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
 Frame = -2

Query: 264 YGFLISPGGLVSQSRCARRLLY---LVNSLFGTISIDLFSSSFVTSAASITDSKRALVMA 94
           YG LI    L+   RCA +L+Y    V+ LF     DL+ SSF  +A ++++     +  
Sbjct: 332 YGQLIL---LLGNIRCAVKLVYNQTKVSDLFNAYKFDLYISSFFNNALTVSNKFIEKLTT 388

Query: 93  KIF 85
           KI+
Sbjct: 389 KIY 391


>Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical
           protein T23D8.9a protein.
          Length = 811

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +3

Query: 333 NEILVYKQ*KKNY*KHCWTLNILHRKISKMPRMHSSNVAPGLTRVCPLL-NKLSHLN 500
           + ++ +KQ  K+       + +LH  ISK PR+     AP   RVC ++ N L  LN
Sbjct: 529 SNVVAHKQHVKDIAIRSNAIFLLHTIISKYPRLDELTDAPKRNRVCEIICNCLRTLN 585


>U40959-3|AAA81767.2|  445|Caenorhabditis elegans Hypothetical
           protein B0310.3 protein.
          Length = 445

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = +2

Query: 110 RLLSVMEAADVTKDEENKSIDIVPNKLLTRYNKRRAHRDWETKPPGEIKKPYE 268
           ++L  +E  +     EN+   +V +    R N+++  ++ + +PP E  +PYE
Sbjct: 336 QILEKLEETEEKPQVENEKKVVVKHVQSARKNQKKGRKNRKVEPPKEEFEPYE 388


>AC084197-9|AAK95894.1|  322|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.29 protein.
          Length = 322

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 19/43 (44%), Positives = 24/43 (55%)
 Frame = +2

Query: 434 QFQRSSRTDKGVSAAEQVVSLKLPLEVNVEEINKRLPETIKVF 562
           +F  SSRTD  V A    V  ++PLE    E++K  PET K F
Sbjct: 58  KFSPSSRTDAKVHAIRNSVICQVPLE--YAELDK-TPETKKAF 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,276,267
Number of Sequences: 27780
Number of extensions: 293507
Number of successful extensions: 986
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)