Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10g04
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    27   0.42 
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    25   1.7  
EF588455-1|ABQ96691.1|  177|Anopheles gambiae transposase protein.     23   9.1  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   9.1  

>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 27.5 bits (58), Expect = 0.42
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 118 IFETAKEEYKKMDNVTKQLLTDVLNLRWMEFL 213
           ++ T ++E+K   N  K+L+      +W EFL
Sbjct: 303 LYSTFRDEFKVARNALKRLIKHTRQRKWKEFL 334


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 170 CFVTLSIFLYSSFAVSNILMH 108
           CFV L+ F+Y  +AVS    H
Sbjct: 569 CFVVLTFFIYYYYAVSTANRH 589


>EF588455-1|ABQ96691.1|  177|Anopheles gambiae transposase protein.
          Length = 177

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 176 SNCFVTLSIFLYSSFAVSNILMH 108
           + CF  L +F Y+    SN+  H
Sbjct: 23  AKCFYCLKVFKYTKGTTSNLKRH 45


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 558  ITSYVHLLFSHKESYRSGYFNV 493
            I +Y H  F  K  +R  YF +
Sbjct: 1250 IVAYCHRFFDRKRIHRKSYFEL 1271


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,650
Number of Sequences: 2352
Number of extensions: 13379
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)