Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10g04
         (694 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF272390-1|AAF78783.1| 1742|Homo sapiens myosin 5c protein.            31   3.9  
AF161352-1|AAF28912.1|  290|Homo sapiens HSPC089 protein.              31   3.9  
AY211922-1|AAO65175.1|  226|Homo sapiens sarcoma antigen NY-SAR-...    30   9.0  
AK128159-1|BAC87304.1|  822|Homo sapiens protein ( Homo sapiens ...    30   9.0  

>AF272390-1|AAF78783.1| 1742|Homo sapiens myosin 5c protein.
          Length = 1742

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
 Frame = +1

Query: 112  IKIFETAKEEYKKMDNVTKQLLTDVLNLRWMEFLKKIIKEARMLENYEMSYENIELSV-- 285
            +K+ E  +E  +KMDN+TKQL  DV        L +   E +  ++YE   ++++  +  
Sbjct: 977  LKLQEKTEELKEKMDNLTKQLFDDVQKEERQRMLLEKSFELK-TQDYEKQIQSLKEEIKA 1035

Query: 286  --NFKLNVDHLNINDVSHYAKDILKFNHCTSATEFDFSIPEFNVDIGQTRAE 435
              + K+ + HL   +  H   D LK      + +   +I EF  +I   +A+
Sbjct: 1036 LKDEKMQLQHL--VEGEHVTSDGLKAEVARLSKQVK-TISEFEKEIELLQAQ 1084


>AF161352-1|AAF28912.1|  290|Homo sapiens HSPC089 protein.
          Length = 290

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
 Frame = +1

Query: 112 IKIFETAKEEYKKMDNVTKQLLTDVLNLRWMEFLKKIIKEARMLENYEMSYENIELSV-- 285
           +K+ E  +E  +KMDN+TKQL  DV        L +   E +  ++YE   ++++  +  
Sbjct: 30  LKLQEKTEELKEKMDNLTKQLFDDVQKEERQRMLLEKSFELK-TQDYEKQIQSLKEEIKA 88

Query: 286 --NFKLNVDHLNINDVSHYAKDILKFNHCTSATEFDFSIPEFNVDIGQTRAE 435
             + K+ + HL   +  H   D LK      + +   +I EF  +I   +A+
Sbjct: 89  LKDEKMQLQHL--VEGEHVTSDGLKAEVARLSKQVK-TISEFEKEIELLQAQ 137


>AY211922-1|AAO65175.1|  226|Homo sapiens sarcoma antigen NY-SAR-79
           protein.
          Length = 226

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = +1

Query: 286 NFKLNVDHLNINDVSHYA---KDILKFNHCTSATEFDFSIPEFNVDIGQTRAELDIGGFK 456
           N  +N+ HL++N+ + +A   KD+    H  + TE +FS  +  +D  Q   E       
Sbjct: 154 NTNVNISHLHLNNENSHASQAKDVKTAVHMKTCTETEFSNKKNQIDENQV-TEATKNDLF 212

Query: 457 LALEINGR 480
           L + IN R
Sbjct: 213 LFVSINER 220


>AK128159-1|BAC87304.1|  822|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46282 fis, clone TESTI4031066. ).
          Length = 822

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = +1

Query: 286 NFKLNVDHLNINDVSHYA---KDILKFNHCTSATEFDFSIPEFNVDIGQTRAELDIGGFK 456
           N  +N+ HL++N+ + +A   KD+    H  + TE +FS  +  +D  Q   E       
Sbjct: 512 NTNVNISHLHLNNENSHASQAKDVKTAVHMKTCTETEFSNKKNQIDENQV-TEATKNDLF 570

Query: 457 LALEINGR 480
           L + IN R
Sbjct: 571 LFVSINER 578


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,499,096
Number of Sequences: 237096
Number of extensions: 1625617
Number of successful extensions: 2906
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2903
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)