Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10g04
         (694 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2418|AAF53345.1|  260|Drosophila melanogaster CG8997-PA...    31   1.1  
AE014134-2885|AAF53636.3| 1912|Drosophila melanogaster CG7527-PA...    30   2.6  
AE014134-2884|ABI31322.1| 1839|Drosophila melanogaster CG7527-PB...    30   2.6  

>AE014134-2418|AAF53345.1|  260|Drosophila melanogaster CG8997-PA
           protein.
          Length = 260

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 268 NIELSV-NFKLNVDHLNINDVSHYAKDILKFNHCTSATEFDFSIPEFNVD 414
           NI+ SV   +  +DH  +N ++ +  D +K N  TS   + F+  + NVD
Sbjct: 66  NIDSSVLKAQGTIDHFRLNGLNDFDIDEMKVNAITSKVTYKFTFRDVNVD 115


>AE014134-2885|AAF53636.3| 1912|Drosophila melanogaster CG7527-PA,
            isoform A protein.
          Length = 1912

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 23/69 (33%), Positives = 29/69 (42%)
 Frame = +1

Query: 175  LTDVLNLRWMEFLKKIIKEARMLENYEMSYENIELSVNFKLNVDHLNINDVSHYAKDILK 354
            LTDV         +   K  R+    +M  E IE  V   LN+  +NIN+  H  K    
Sbjct: 984  LTDVHFAARSATQQPYFKAVRLNGVVQMHREEIEKDVG--LNITMVNINECLHEGKGKCG 1041

Query: 355  FNHCTSATE 381
             N CTS  E
Sbjct: 1042 SNSCTSKVE 1050


>AE014134-2884|ABI31322.1| 1839|Drosophila melanogaster CG7527-PB,
            isoform B protein.
          Length = 1839

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 23/69 (33%), Positives = 29/69 (42%)
 Frame = +1

Query: 175  LTDVLNLRWMEFLKKIIKEARMLENYEMSYENIELSVNFKLNVDHLNINDVSHYAKDILK 354
            LTDV         +   K  R+    +M  E IE  V   LN+  +NIN+  H  K    
Sbjct: 911  LTDVHFAARSATQQPYFKAVRLNGVVQMHREEIEKDVG--LNITMVNINECLHEGKGKCG 968

Query: 355  FNHCTSATE 381
             N CTS  E
Sbjct: 969  SNSCTSKVE 977


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,579,148
Number of Sequences: 53049
Number of extensions: 535237
Number of successful extensions: 1304
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1304
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)