Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10g04
(694 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69383-3|CAA93409.1| 261|Caenorhabditis elegans Hypothetical pr... 34 0.084
Z81496-13|CAB04075.1| 365|Caenorhabditis elegans Hypothetical p... 29 2.4
AL031627-26|CAA20972.1| 365|Caenorhabditis elegans Hypothetical... 29 2.4
AF016443-1|AAC24277.1| 366|Caenorhabditis elegans Hypothetical ... 29 3.2
AC026301-4|AAK68895.1| 347|Caenorhabditis elegans Hypothetical ... 29 4.2
Z81030-2|CAB02704.2| 343|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z50177-1|CAA90543.2| 607|Caenorhabditis elegans Hypothetical pr... 28 7.3
U41279-2|AAK31425.2| 145|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z81036-3|CAB02741.1| 357|Caenorhabditis elegans Hypothetical pr... 27 9.6
>Z69383-3|CAA93409.1| 261|Caenorhabditis elegans Hypothetical
protein F13E9.6 protein.
Length = 261
Score = 34.3 bits (75), Expect = 0.084
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 671 KSITALFLMKSLIFXETSTPQSITHMSLFTTSGIIFNSSQVMYIC 537
+ + LF SL+ S+ Q ITH SLF I+F + ++C
Sbjct: 159 QKVNILFHHTSLVIINKSSQQIITHKSLFDMELIVFKEEKTSFVC 203
>Z81496-13|CAB04075.1| 365|Caenorhabditis elegans Hypothetical
protein Y102A5C.1 protein.
Length = 365
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Frame = +1
Query: 202 MEFLKKII-----KEARMLEN---YEMSYENIELSVNFKLNVDHLNINDVSHYAKDILKF 357
+E +K+I+ K+A+ LE ++ EN +F+L +HL DV + F
Sbjct: 247 IEIMKEIVELDQWKQAKHLEIDSLVKIPIENFLHFEHFELFFEHLCFQDVKERLLESSNF 306
Query: 358 NHCTSATEFDFSIPEFNVDIG 420
HCT F + E + G
Sbjct: 307 RHCTLQVMNSFDLEELAANFG 327
>AL031627-26|CAA20972.1| 365|Caenorhabditis elegans Hypothetical
protein Y102A5C.1 protein.
Length = 365
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Frame = +1
Query: 202 MEFLKKII-----KEARMLEN---YEMSYENIELSVNFKLNVDHLNINDVSHYAKDILKF 357
+E +K+I+ K+A+ LE ++ EN +F+L +HL DV + F
Sbjct: 247 IEIMKEIVELDQWKQAKHLEIDSLVKIPIENFLHFEHFELFFEHLCFQDVKERLLESSNF 306
Query: 358 NHCTSATEFDFSIPEFNVDIG 420
HCT F + E + G
Sbjct: 307 RHCTLQVMNSFDLEELAANFG 327
>AF016443-1|AAC24277.1| 366|Caenorhabditis elegans Hypothetical
protein C17E7.5 protein.
Length = 366
Score = 29.1 bits (62), Expect = 3.2
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +1
Query: 148 KMDNVTKQLLTDVLNLRWMEFLKK--IIKEARMLE--NYEMSYENIELSVNFKLNVDHLN 315
+ N K TD + +E L+K + +AR E N+E S+ I S+ F +++D ++
Sbjct: 135 RRSNAMKTQFTDE-DFSLLEVLEKRRMKMKARRSEITNHEWSFFGIYTSIEFLMSLDFMS 193
Query: 316 INDVSHYAKDILKFNHCTSATEF 384
+++ K IL ++C A+ F
Sbjct: 194 SLNLNIQDKKILLKHYCVKASLF 216
>AC026301-4|AAK68895.1| 347|Caenorhabditis elegans Hypothetical
protein Y54F10BM.4 protein.
Length = 347
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +1
Query: 340 KDILKFNHCTSATEFDFSIPEFNVDIGQTRAELDIGGFKLALEINGRIYLRNVKISGAIG 519
K++LK T ++ +F + ELD+ GF L+L+ IY+ +V A+
Sbjct: 14 KELLKLRKV--CTTLKTAVDKFGIHFNSIHFELDVKGFTLSLDDGCFIYIGDVDGGAAVD 71
Query: 520 FFMREKQ 540
R Q
Sbjct: 72 HCHRRIQ 78
>Z81030-2|CAB02704.2| 343|Caenorhabditis elegans Hypothetical
protein C01G10.2 protein.
Length = 343
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = -3
Query: 683 YTVIKSITALFLMKSLIFXETSTPQSITHMSLFTTSGIIFNSSQVMYICFSR 528
Y ++ + +++ +SLI +P + + F T+ ++FN Q +Y+ F+R
Sbjct: 67 YVLLVVMLGVYVPESLIGYSFYSPAVESILVTFGTNMLVFNEFQSVYLSFNR 118
>Z50177-1|CAA90543.2| 607|Caenorhabditis elegans Hypothetical
protein F46G10.2 protein.
Length = 607
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 675 NQVDYCFVSNEIVDLL*DVHTAEYYTHVALYDVWNNF 565
N + + + +I + + H+A Y+ +YDV NNF
Sbjct: 440 NMLHWVYEQTKIAEKIIVFHSAYYHPRCGIYDVINNF 476
>U41279-2|AAK31425.2| 145|Caenorhabditis elegans Hypothetical
protein C17C3.9 protein.
Length = 145
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 499 KISGAIGFFMR-EKQMYITCDELKIIPDVVKSDMCV-ILCGVDVSXKINDFIRN 654
++ +G F R EK++ DE + P V+K C+ LC V V+ K+N+ R+
Sbjct: 68 ELENIVGCFDRYEKEISTIPDEYRTHPCVIKFQNCIRALCNV-VAKKLNNTTRD 120
>Z81036-3|CAB02741.1| 357|Caenorhabditis elegans Hypothetical
protein C16C2.4 protein.
Length = 357
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +1
Query: 115 KIFETAKEEYKKMDNVTKQLLTDV----LNLRWMEFLKKIIKEARMLENYEMSYENI 273
K+FE AK+ KK+ V ++ + LN EF K++ +E L N ++ ++ +
Sbjct: 92 KLFEYAKDAGKKLGEVKNAVIENTMLGDLNKEQDEFEKQLQEERDKLRNIDLPWQGL 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,780,943
Number of Sequences: 27780
Number of extensions: 293703
Number of successful extensions: 872
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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