Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10g02
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    25   0.61 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   5.7  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   5.7  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   5.7  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   5.7  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   5.7  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   5.7  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   5.7  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   5.7  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   9.9  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   9.9  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   9.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.9  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.9  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   9.9  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = +2

Query: 179 LRLLESVKYGNKDPSNYEMVLN--FSDKDLNELLLN 280
           ++ LES+K GN+     ++ +N   SD + N+L LN
Sbjct: 120 IKSLESLKPGNQSTPGIKLSINIILSDPNTNKLKLN 155


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 197 RIRVSGARVGYTQPNACSLYPP 132
           R + S     Y  PNA S YPP
Sbjct: 19  RDQQSSPGTDYYNPNANSTYPP 40


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 197 RIRVSGARVGYTQPNACSLYPP 132
           R + S     Y  PNA S YPP
Sbjct: 19  RDQQSSPGTDYYNPNANSTYPP 40


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 197 RIRVSGARVGYTQPNACSLYPP 132
           R + S     Y  PNA S YPP
Sbjct: 19  RDQQSSPGTDYYNPNANSTYPP 40


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 197 RIRVSGARVGYTQPNACSLYPP 132
           R + S     Y  PNA S YPP
Sbjct: 19  RDQQSSPGTDYYNPNANSTYPP 40


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 197 RIRVSGARVGYTQPNACSLYPP 132
           R + S     Y  PNA S YPP
Sbjct: 19  RDQQSSPGTDYYNPNANSTYPP 40


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 197 RIRVSGARVGYTQPNACSLYPP 132
           R + S     Y  PNA S YPP
Sbjct: 19  RDQQSSPGTDYYNPNANSTYPP 40


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 197 RIRVSGARVGYTQPNACSLYPP 132
           R + S     Y  PNA S YPP
Sbjct: 19  RDQQSSPGTDYYNPNANSTYPP 40


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 197 RIRVSGARVGYTQPNACSLYPP 132
           R + S     Y  PNA S YPP
Sbjct: 19  RDQQSSPGTDYYNPNANSTYPP 40


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 643 ICLVFSRNKNANTQKVF 693
           IC + +  +NA TQK F
Sbjct: 341 ICTLLNDPQNAKTQKAF 357


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
          protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -1

Query: 95 TRPVHVRSKRPPAACDSDYGPGY 27
          T P +     PP+ CD  Y P Y
Sbjct: 20 TPPHNPAYSPPPSYCDPWYNPYY 42


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 276 SNNSLRSLSEKFSTIS*FEGSLFPYLTDSSKRSA 175
           +NN   + ++  S +   EG   P +TDS  R A
Sbjct: 505 TNNLSETFTQNLSLMDESEGRQEPNMTDSLTRLA 538


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 180  SAYSNPSSTGTKTP 221
            S  S P STG+K+P
Sbjct: 1115 SGSSGPGSTGSKSP 1128


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 158 AVCILHALRLLESVKYGNKDPSNYEMVLNFSD 253
           A C +  LR L+   Y N    N   +L F+D
Sbjct: 557 AFCKMQPLRTLKIGVYRNIKNFNIPSILQFND 588


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 180 SAYSNPSSTGTKTPQTTRWY*TSPIKISTSYCSTYRHY 293
           +AYS+ S +G+    ++    TSP      Y S   H+
Sbjct: 33  AAYSSSSPSGSSPQHSSSSASTSPAARMYPYVSAAHHH 70


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 180 SAYSNPSSTGTKTPQTTRWY*TSPIKISTSYCSTYRHY 293
           +AYS+ S +G+    ++    TSP      Y S   H+
Sbjct: 33  AAYSSSSPSGSSPQHSSSSASTSPAARMYPYVSAAHHH 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,113
Number of Sequences: 336
Number of extensions: 2735
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)