Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10g02
         (713 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72507-15|CAJ55245.1|  365|Caenorhabditis elegans Hypothetical p...    30   1.9  
Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical pr...    30   1.9  

>Z72507-15|CAJ55245.1|  365|Caenorhabditis elegans Hypothetical
           protein F17C11.9c protein.
          Length = 365

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -1

Query: 620 TILKCEYKYKLNLTLKVIKCVLI 552
           +I KCEYKY  +LTL  + C LI
Sbjct: 250 SIWKCEYKYPEDLTLAFMSCNLI 272


>Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical
           protein F17C11.9b protein.
          Length = 373

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -1

Query: 620 TILKCEYKYKLNLTLKVIKCVLI 552
           +I KCEYKY  +LTL  + C LI
Sbjct: 258 SIWKCEYKYPEDLTLAFMSCNLI 280


>Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical
           protein F17C11.9a protein.
          Length = 398

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -1

Query: 620 TILKCEYKYKLNLTLKVIKCVLI 552
           +I KCEYKY  +LTL  + C LI
Sbjct: 283 SIWKCEYKYPEDLTLAFMSCNLI 305


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,209,404
Number of Sequences: 27780
Number of extensions: 247025
Number of successful extensions: 584
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)