Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10g02
         (713 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g12090.1 68418.m01420 protein kinase family protein contains ...    28   7.1  
At1g62990.1 68414.m07113 homeodomain transcription factor (KNAT7...    28   7.1  
At1g47620.1 68414.m05289 cytochrome P450, putative similar to cy...    28   7.1  
At4g01600.1 68417.m00209 GRAM domain-containing protein / ABA-re...    27   9.3  
At1g07160.1 68414.m00762 protein phosphatase 2C, putative / PP2C...    27   9.3  

>At5g12090.1 68418.m01420 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 369

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +1

Query: 598 LYSHFSIVCDMFKVFICLVFSRNKNANTQ-KVFDYG 702
           ++SH  + CD+ K    L+FSR  +A+ + K+FD+G
Sbjct: 151 MHSHGYVHCDL-KSDNLLIFSRKDSASCELKIFDFG 185


>At1g62990.1 68414.m07113 homeodomain transcription factor (KNAT7)
           contains Pfam profiles:  PF03789 ELK domain, PF03790
           KNOX1 domain, PF03791 KNOX2 domain; similar to homeobox
           protein HD1 SP:P46606 from [Brassica napus]; identical
           to cDNA  homeodomain transcription factor KNAT7 (KNAT7)
           GI:11878229
          Length = 291

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +1

Query: 133 GGYNEQAFGCVYPTRAPLTRIRQVREQRPLKLRDG 237
           GG++   FG + PT +  + + +VR++  L+L+ G
Sbjct: 168 GGHDMTGFGPLLPTESERSLMERVRQELKLELKQG 202


>At1g47620.1 68414.m05289 cytochrome P450, putative similar to
           cytochrome P450 GI:4688670 from [Catharanthus roseus]
          Length = 520

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 491 SLHLYSPYSNHFCFLYNYYFLLK 559
           S+ LY  +    CFL ++YFL+K
Sbjct: 3   SIGLYEAFIGFLCFLISFYFLVK 25


>At4g01600.1 68417.m00209 GRAM domain-containing protein /
           ABA-responsive protein-related similar to ABA-responsive
           protein [Hordeum vulgare] GI:4103635; contains Pfam
           profile PF02893: GRAM domain
          Length = 233

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = +2

Query: 95  CEICRTTLYFSKVVGITNKRSAVCILHALRLLESVKYGNKDPSNYEMVLNF 247
           C I  T+   + V+ I+N+R A C  +A+RL  S   GN   + Y++V+ +
Sbjct: 126 CYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSSAG-GNGVAAYYKVVMEW 175


>At1g07160.1 68414.m00762 protein phosphatase 2C, putative / PP2C,
           putative similar to protein phosphatase 2C GI:2582800
           from [Medicago sativa]
          Length = 380

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -1

Query: 134 PPLRSKGWSYISRTRPVHVRSKRPPA--ACDSDYGPGYRLRQ 15
           PP+ S   S  S T P  +R  +PPA     SD GPG  L++
Sbjct: 43  PPVSSTSPSAASPTSPFCLRLLKPPAKLGFGSDSGPGSILKR 84


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,073,708
Number of Sequences: 28952
Number of extensions: 220873
Number of successful extensions: 576
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)