Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10g01
(733 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-863|AAS64639.1| 338|Drosophila melanogaster CG9124-PB,... 386 e-107
AE014134-862|AAF52210.3| 338|Drosophila melanogaster CG9124-PA,... 386 e-107
AF160896-1|AAD46836.2| 337|Drosophila melanogaster GM14618p pro... 384 e-107
AY118972-1|AAM50832.1| 280|Drosophila melanogaster LD47792p pro... 50 3e-06
AE014297-137|AAF52101.1| 280|Drosophila melanogaster CG9769-PA ... 50 3e-06
AY089283-1|AAL90021.1| 338|Drosophila melanogaster AT07973p pro... 39 0.006
AE013599-3862|AAF47199.1| 338|Drosophila melanogaster CG3416-PA... 39 0.006
M64643-1|AAA28695.1| 338|Drosophila melanogaster Mov34 protein. 33 0.40
AE013599-160|AAF57273.2| 286|Drosophila melanogaster CG8335-PA ... 33 0.40
AY070607-1|AAL48078.1| 341|Drosophila melanogaster RE71054p pro... 33 0.53
AE014297-3186|AAF56022.1| 341|Drosophila melanogaster CG6932-PA... 33 0.53
AY075309-1|AAL68176.1| 420|Drosophila melanogaster AT31826p pro... 32 0.70
AE014297-4599|AAF57051.1| 420|Drosophila melanogaster CG2224-PA... 32 0.70
BT011170-1|AAR84385.1| 897|Drosophila melanogaster AT01547p pro... 31 1.6
AE014296-1292|AAF50537.1| 1132|Drosophila melanogaster CG14838-P... 31 1.6
AY940435-1|AAX38184.1| 141|Drosophila melanogaster glycoprotein... 30 3.7
BT004880-1|AAO45236.1| 348|Drosophila melanogaster GH14121p pro... 29 4.9
AE014297-786|AAF54268.1| 348|Drosophila melanogaster CG8043-PA ... 29 4.9
AJ000387-2|CAA04049.1| 343|Drosophila melanogaster Gag protein ... 29 6.5
AE013599-3630|AAF47029.1| 1000|Drosophila melanogaster CG5372-PA... 29 6.5
>AE014134-863|AAS64639.1| 338|Drosophila melanogaster CG9124-PB,
isoform B protein.
Length = 338
Score = 386 bits (949), Expect = e-107
Identities = 183/242 (75%), Positives = 215/242 (88%), Gaps = 2/242 (0%)
Frame = +1
Query: 13 MASRAGS-ARRAPENEATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRL 189
MA+RA A R +++ TI YVQCDGLAVMK+VKHCHEES SNM++AQGALLGLVV+ L
Sbjct: 1 MANRANRHAARTEDSDNTINYVQCDGLAVMKMVKHCHEES-SNMDLAQGALLGLVVDKCL 59
Query: 190 EITNCFPFPKH-DDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQY 366
EITNCFPFPK D+TMDEE YQL +MRRLRRVNVDH HVGWYQS+DVGN LS++LLESQY
Sbjct: 60 EITNCFPFPKSGDETMDEEMYQLTVMRRLRRVNVDHLHVGWYQSSDVGNSLSMALLESQY 119
Query: 367 HYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPEALRNLKIGYENLF 546
HYQTSIEESVVV+YDT+KS+RGFL LKAYRLTPQAI MYK+GD+TPEA R LK+GYENLF
Sbjct: 120 HYQTSIEESVVVVYDTQKSSRGFLCLKAYRLTPQAIQMYKDGDFTPEAFRTLKVGYENLF 179
Query: 547 IEVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVLEGQLRSLMERVDELNQEAI 726
E+PIVI+NSPLTNIM+SEL E++PE++G FLDLGTA+VLE Q+RSL+ERVDEL QEA+
Sbjct: 180 AEIPIVIKNSPLTNIMMSELNELLPEDKGHNFLDLGTATVLENQMRSLIERVDELYQEAV 239
Query: 727 KF 732
++
Sbjct: 240 RY 241
>AE014134-862|AAF52210.3| 338|Drosophila melanogaster CG9124-PA,
isoform A protein.
Length = 338
Score = 386 bits (949), Expect = e-107
Identities = 183/242 (75%), Positives = 215/242 (88%), Gaps = 2/242 (0%)
Frame = +1
Query: 13 MASRAGS-ARRAPENEATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRL 189
MA+RA A R +++ TI YVQCDGLAVMK+VKHCHEES SNM++AQGALLGLVV+ L
Sbjct: 1 MANRANRHAARTEDSDNTINYVQCDGLAVMKMVKHCHEES-SNMDLAQGALLGLVVDKCL 59
Query: 190 EITNCFPFPKH-DDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQY 366
EITNCFPFPK D+TMDEE YQL +MRRLRRVNVDH HVGWYQS+DVGN LS++LLESQY
Sbjct: 60 EITNCFPFPKSGDETMDEEMYQLTVMRRLRRVNVDHLHVGWYQSSDVGNSLSMALLESQY 119
Query: 367 HYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPEALRNLKIGYENLF 546
HYQTSIEESVVV+YDT+KS+RGFL LKAYRLTPQAI MYK+GD+TPEA R LK+GYENLF
Sbjct: 120 HYQTSIEESVVVVYDTQKSSRGFLCLKAYRLTPQAIQMYKDGDFTPEAFRTLKVGYENLF 179
Query: 547 IEVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVLEGQLRSLMERVDELNQEAI 726
E+PIVI+NSPLTNIM+SEL E++PE++G FLDLGTA+VLE Q+RSL+ERVDEL QEA+
Sbjct: 180 AEIPIVIKNSPLTNIMMSELNELLPEDKGHNFLDLGTATVLENQMRSLIERVDELYQEAV 239
Query: 727 KF 732
++
Sbjct: 240 RY 241
>AF160896-1|AAD46836.2| 337|Drosophila melanogaster GM14618p
protein.
Length = 337
Score = 384 bits (944), Expect = e-107
Identities = 182/241 (75%), Positives = 214/241 (88%), Gaps = 2/241 (0%)
Frame = +1
Query: 16 ASRAGS-ARRAPENEATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLE 192
A+RA A R +++ TI YVQCDGLAVMK+VKHCHEES SNM++AQGALLGLVV+ LE
Sbjct: 1 ANRANRHAARTEDSDNTINYVQCDGLAVMKMVKHCHEES-SNMDLAQGALLGLVVDKCLE 59
Query: 193 ITNCFPFPKH-DDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQYH 369
ITNCFPFPK D+TMDEE YQL +MRRLRRVNVDH HVGWYQS+DVGN LS++LLESQYH
Sbjct: 60 ITNCFPFPKSGDETMDEEMYQLTVMRRLRRVNVDHLHVGWYQSSDVGNSLSMALLESQYH 119
Query: 370 YQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPEALRNLKIGYENLFI 549
YQTSIEESVVV+YDT+KS+RGFL LKAYRLTPQAI MYK+GD+TPEA R LK+GYENLF
Sbjct: 120 YQTSIEESVVVVYDTQKSSRGFLCLKAYRLTPQAIQMYKDGDFTPEAFRTLKVGYENLFA 179
Query: 550 EVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVLEGQLRSLMERVDELNQEAIK 729
E+PIVI+NSPLTNIM+SEL E++PE++G FLDLGTA+VLE Q+RSL+ERVDEL QEA++
Sbjct: 180 EIPIVIKNSPLTNIMMSELNELLPEDKGHNFLDLGTATVLENQMRSLIERVDELYQEAVR 239
Query: 730 F 732
+
Sbjct: 240 Y 240
>AY118972-1|AAM50832.1| 280|Drosophila melanogaster LD47792p
protein.
Length = 280
Score = 50.0 bits (114), Expect = 3e-06
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Frame = +1
Query: 154 GALLGLVVENRLEITNCF--PFPKHDDTMDEE-EYQLDMMRRLRRVNVDHFHVGWYQSA- 321
G LLG V + +E+TNCF P +HDD ++ E Y LDM R+VN + VGW+ +
Sbjct: 34 GTLLGSVDKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNSNESVVGWWATGN 93
Query: 322 DVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAY 453
DV N S+ +Y V + DT G + L+AY
Sbjct: 94 DVTNHSSV----IHEYYARECNNPVHLTVDTSLQG-GRMGLRAY 132
>AE014297-137|AAF52101.1| 280|Drosophila melanogaster CG9769-PA
protein.
Length = 280
Score = 50.0 bits (114), Expect = 3e-06
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Frame = +1
Query: 154 GALLGLVVENRLEITNCF--PFPKHDDTMDEE-EYQLDMMRRLRRVNVDHFHVGWYQSA- 321
G LLG V + +E+TNCF P +HDD ++ E Y LDM R+VN + VGW+ +
Sbjct: 34 GTLLGSVDKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNSNESVVGWWATGN 93
Query: 322 DVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAY 453
DV N S+ +Y V + DT G + L+AY
Sbjct: 94 DVTNHSSV----IHEYYARECNNPVHLTVDTSLQG-GRMGLRAY 132
>AY089283-1|AAL90021.1| 338|Drosophila melanogaster AT07973p
protein.
Length = 338
Score = 39.1 bits (87), Expect = 0.006
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 8/144 (5%)
Frame = +1
Query: 46 PENEATIQYVQCDGLAVMKIVKHCHEES-CSNMEVAQGALLGLV-VENRLEITNCFPFPK 219
P E ++ V L ++ +V H + N + G LLG + L+++N F P
Sbjct: 2 PSQEVSVNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPF 61
Query: 220 HDDTMDEEEYQLD------MMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQYHYQTS 381
+D D+ + LD M ++VN VGWY + + +++ E Y
Sbjct: 62 DEDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVRRY--- 118
Query: 382 IEESVVVIYDTKKSARGFLTLKAY 453
SV+VI D K G L +AY
Sbjct: 119 CPNSVLVIIDAKPKDLG-LPTEAY 141
>AE013599-3862|AAF47199.1| 338|Drosophila melanogaster CG3416-PA
protein.
Length = 338
Score = 39.1 bits (87), Expect = 0.006
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 8/144 (5%)
Frame = +1
Query: 46 PENEATIQYVQCDGLAVMKIVKHCHEES-CSNMEVAQGALLGLV-VENRLEITNCFPFPK 219
P E ++ V L ++ +V H + N + G LLG + L+++N F P
Sbjct: 2 PSQEVSVNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPF 61
Query: 220 HDDTMDEEEYQLD------MMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQYHYQTS 381
+D D+ + LD M ++VN VGWY + + +++ E Y
Sbjct: 62 DEDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVRRY--- 118
Query: 382 IEESVVVIYDTKKSARGFLTLKAY 453
SV+VI D K G L +AY
Sbjct: 119 CPNSVLVIIDAKPKDLG-LPTEAY 141
>M64643-1|AAA28695.1| 338|Drosophila melanogaster Mov34 protein.
Length = 338
Score = 33.1 bits (72), Expect = 0.40
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Frame = +1
Query: 46 PENEATIQYVQCDGLAVMKIVKHCHEES-CSNMEVAQGALLGLV-VENRLEITNCFPFPK 219
P E ++ V L ++ +V H + N + G LLG + L+++N F P
Sbjct: 2 PSQEVSVNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNTFAVPF 61
Query: 220 HDDTMDEEEYQLD------MMRRLRRVNVDHFHVGWYQS 318
D D+ + LD M ++VN VGWY +
Sbjct: 62 DVDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHT 100
>AE013599-160|AAF57273.2| 286|Drosophila melanogaster CG8335-PA
protein.
Length = 286
Score = 33.1 bits (72), Expect = 0.40
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 154 GALLGLVVENRLEITNCFPFPKHDDTMDEEEYQLDM 261
G LLG E +EITNCF P H + + + LDM
Sbjct: 38 GTLLGRNKEGHIEITNCFTVP-HKEHSENKRIDLDM 72
>AY070607-1|AAL48078.1| 341|Drosophila melanogaster RE71054p
protein.
Length = 341
Score = 32.7 bits (71), Expect = 0.53
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Frame = +1
Query: 88 LAVMKIVKHCHEESCSNMEVAQ--GALLGLVVENRLEITNCFPFPKH---DDTMDEEEYQ 252
L +M I +H + E Q GAL+G +EI N F D+T+ ++Y
Sbjct: 59 LVIMNISEHWTRFRAQHGEPRQVYGALIGKQKGRNIEIMNSFELKTDVIGDETVINKDYY 118
Query: 253 LDMMRRLRRVNVDHFHVGWYQSAD 324
++ ++V D +GWY + D
Sbjct: 119 NKKEQQYKQVFSDLDFIGWYTTGD 142
>AE014297-3186|AAF56022.1| 341|Drosophila melanogaster CG6932-PA
protein.
Length = 341
Score = 32.7 bits (71), Expect = 0.53
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Frame = +1
Query: 88 LAVMKIVKHCHEESCSNMEVAQ--GALLGLVVENRLEITNCFPFPKH---DDTMDEEEYQ 252
L +M I +H + E Q GAL+G +EI N F D+T+ ++Y
Sbjct: 59 LVIMNISEHWTRFRAQHGEPRQVYGALIGKQKGRNIEIMNSFELKTDVIGDETVINKDYY 118
Query: 253 LDMMRRLRRVNVDHFHVGWYQSAD 324
++ ++V D +GWY + D
Sbjct: 119 NKKEQQYKQVFSDLDFIGWYTTGD 142
>AY075309-1|AAL68176.1| 420|Drosophila melanogaster AT31826p
protein.
Length = 420
Score = 32.3 bits (70), Expect = 0.70
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Frame = +1
Query: 70 YVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPFPKHDDTMDE--- 240
YV D + V +K + N+E G L G + +N+L IT+ P+ T D
Sbjct: 251 YVPGDTMEVF--LKLALANTSKNIETC-GVLAGHLSQNQLYITHIIT-PQQQGTPDSCNT 306
Query: 241 --EEYQLDMMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEESVVVIYDT 414
EE D+ +++ + + H Q+A FLS L + YQ + E++ ++
Sbjct: 307 MHEEQIFDVQDQMQLITLGWIHTHPTQTA----FLSSVDLHTHCSYQIMMPEALAIVCAP 362
Query: 415 KKSARGFLTL 444
K + GF L
Sbjct: 363 KYNTTGFFIL 372
>AE014297-4599|AAF57051.1| 420|Drosophila melanogaster CG2224-PA
protein.
Length = 420
Score = 32.3 bits (70), Expect = 0.70
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Frame = +1
Query: 70 YVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPFPKHDDTMDE--- 240
YV D + V +K + N+E G L G + +N+L IT+ P+ T D
Sbjct: 251 YVPGDTMEVF--LKLALANTSKNIETC-GVLAGHLSQNQLYITHIIT-PQQQGTPDSCNT 306
Query: 241 --EEYQLDMMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEESVVVIYDT 414
EE D+ +++ + + H Q+A FLS L + YQ + E++ ++
Sbjct: 307 MHEEQIFDVQDQMQLITLGWIHTHPTQTA----FLSSVDLHTHCSYQIMMPEALAIVCAP 362
Query: 415 KKSARGFLTL 444
K + GF L
Sbjct: 363 KYNTTGFFIL 372
>BT011170-1|AAR84385.1| 897|Drosophila melanogaster AT01547p
protein.
Length = 897
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +1
Query: 127 SCSNMEVAQGALLGLVVENRLEITNCFPFPK------HDDTMDEEEYQLDMMRRLRRVNV 288
SC + V++ A L +E + +T FP+ + D DE E ++M++ + N
Sbjct: 76 SCQKVMVSEKAQKALKIEVGINVTQEFPWKQVQFKDLRDVLFDELENSAELMKKFKNFNP 135
Query: 289 DHF 297
+HF
Sbjct: 136 EHF 138
>AE014296-1292|AAF50537.1| 1132|Drosophila melanogaster CG14838-PA
protein.
Length = 1132
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +1
Query: 127 SCSNMEVAQGALLGLVVENRLEITNCFPFPK------HDDTMDEEEYQLDMMRRLRRVNV 288
SC + V++ A L +E + +T FP+ + D DE E ++M++ + N
Sbjct: 76 SCQKVMVSEKAQKALKIEVGINVTQEFPWKQVQFKDLRDVLFDELENSAELMKKFKNFNP 135
Query: 289 DHF 297
+HF
Sbjct: 136 EHF 138
>AY940435-1|AAX38184.1| 141|Drosophila melanogaster glycoprotein
hormone alpha 2 protein.
Length = 141
Score = 29.9 bits (64), Expect = 3.7
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Frame = +3
Query: 252 VGHDEEASKSQC*SFSCWMVPECR--CRQFSKPFVIRVTISLSDLY*--------GECCC 401
VG+ + + C F+ CR C FS P + + SLS L+ G+CC
Sbjct: 47 VGNTRKITIPDCVEFTI-TTNACRGFCESFSVPSIPMMGSSLSVLFKPPKPVVSVGQCCN 105
Query: 402 DLRYKEISQRILDFEGL 452
++ +EI +R+L EG+
Sbjct: 106 MMKSEEIQRRVLCIEGI 122
>BT004880-1|AAO45236.1| 348|Drosophila melanogaster GH14121p
protein.
Length = 348
Score = 29.5 bits (63), Expect = 4.9
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Frame = +1
Query: 349 LLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPEALRNLKI 528
LL Y+T+ E+++V D + S+ L+ YR+ + + +YTP + NLK
Sbjct: 91 LLYDTILYRTNNPETILVECDREASSDFRRHLRTYRVRRRIEVDSVDDEYTPWVMFNLKD 150
Query: 529 GYENLFIEVP-IVIRNSPLTNIMISEL---TEMIPEEEGSKFLDLGTAS 663
E + P + + P +++ + + T+M + F D GTA+
Sbjct: 151 ASEAVPNPHPDLFVSPDPRLHVLGTRILAPTDMDWSKLSKCFADFGTAT 199
>AE014297-786|AAF54268.1| 348|Drosophila melanogaster CG8043-PA
protein.
Length = 348
Score = 29.5 bits (63), Expect = 4.9
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Frame = +1
Query: 349 LLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPEALRNLKI 528
LL Y+T+ E+++V D + S+ L+ YR+ + + +YTP + NLK
Sbjct: 91 LLYDTILYRTNNPETILVECDREASSDFRRHLRTYRVRRRIEVDSVDDEYTPWVMFNLKD 150
Query: 529 GYENLFIEVP-IVIRNSPLTNIMISEL---TEMIPEEEGSKFLDLGTAS 663
E + P + + P +++ + + T+M + F D GTA+
Sbjct: 151 ASEAVPNPHPDLFVSPDPRLHVLGTRILAPTDMDWSKLSKCFADFGTAT 199
>AJ000387-2|CAA04049.1| 343|Drosophila melanogaster Gag protein
protein.
Length = 343
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 370 YQTSIEESVVVIYDTKKSARGFLTLKAYR 456
Y TS+EE +++I T ++ G LTL+A R
Sbjct: 105 YITSVEEIIMLIRGTDQTPYGLLTLRAIR 133
>AE013599-3630|AAF47029.1| 1000|Drosophila melanogaster CG5372-PA
protein.
Length = 1000
Score = 29.1 bits (62), Expect = 6.5
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 352 LESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPEAL-RNLKI 528
+ SQ Q E+ + + K F+ Y + + M+KEGD T AL RNLK
Sbjct: 858 VRSQMRVQLKPEQPIDLRISFKVDLNDFVNTFDYLVIFTNVEMFKEGDSTSIALKRNLKP 917
Query: 529 GYENLFIEVPIVI 567
+ E P+ I
Sbjct: 918 NVIFNYSETPLPI 930
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,749,301
Number of Sequences: 53049
Number of extensions: 810157
Number of successful extensions: 2560
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2552
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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