Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10g01
(733 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g10840.1 68414.m01246 eukaryotic translation initiation facto... 171 4e-43
At1g10840.2 68414.m01245 eukaryotic translation initiation facto... 113 1e-25
At5g05780.1 68418.m00636 26S proteasome non-ATPase regulatory su... 46 3e-05
At3g11270.1 68416.m01370 26S proteasome non-ATPase regulatory su... 46 3e-05
At5g22355.1 68418.m02608 DC1 domain-containing protein contains ... 29 4.2
At2g39990.1 68415.m04914 eukaryotic translation initiation facto... 29 4.2
At5g44960.1 68418.m05514 F-box family protein contains F-box dom... 28 5.6
At4g33520.3 68417.m04762 metal-transporting P-type ATPase, putat... 28 5.6
At4g33520.2 68417.m04761 metal-transporting P-type ATPase, putat... 28 5.6
At2g32260.1 68415.m03943 cholinephosphate cytidylyltransferase, ... 28 5.6
At1g73680.1 68414.m08532 pathogen-responsive alpha-dioxygenase, ... 28 7.3
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 27 9.7
At1g22340.1 68414.m02795 UDP-glucoronosyl/UDP-glucosyl transfera... 27 9.7
At1g11330.1 68414.m01301 S-locus lectin protein kinase family pr... 27 9.7
>At1g10840.1 68414.m01246 eukaryotic translation initiation factor 3
subunit 3 / eIF-3 gamma / eIF3h (TIF3H1) identical to
SP|Q9C5Z2 Eukaryotic translation initiation factor 3
subunit 3 (eIF-3 gamma) (eIF3 p38 subunit) (eIF3h)
{Arabidopsis thaliana}; contains Pfam profile PF01398:
Mov34/MPN/PAD-1 family
Length = 337
Score = 171 bits (416), Expect = 4e-43
Identities = 93/228 (40%), Positives = 139/228 (60%), Gaps = 5/228 (2%)
Frame = +1
Query: 64 IQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPFPKHDDTMDEE 243
++ VQ +GLAV+KI+KHC E S + + G LLGL V + LE+TNCFPFP DD + E
Sbjct: 22 LRVVQIEGLAVLKIIKHCKEFSPT---LVTGQLLGLDVGSVLEVTNCFPFPVRDDDEEIE 78
Query: 244 ----EYQLDMMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEESVVVIYD 411
YQL+MMR LR VNVD+ VGWYQS +G++ ++ L+E+ +YQ +I+ V +IYD
Sbjct: 79 ADGANYQLEMMRCLREVNVDNNTVGWYQSTVLGSYQTVELIETFMNYQENIKRCVCIIYD 138
Query: 412 TKKSARGFLTLKAYRLTPQAIAMYKEGDYTPEALRNLKIGYENLFIEVPIVIRNSPLTNI 591
K+ G L LKA +L+ + +Y+ G++T E LR + ++F E+PI + NS L +
Sbjct: 139 PSKADLGVLALKALKLSDSFMELYRGGNFTGEKLREKNFSWMDIFEEIPIKVSNSALVSA 198
Query: 592 MISELTEMIPEEEGS-KFLDLGTASVLEGQLRSLMERVDELNQEAIKF 732
++EL P +G L T LE + L++ +D+L+ E KF
Sbjct: 199 FMTELETDTPVSQGDYDRLHSSTTPFLENNMEFLIKCMDDLSMEQQKF 246
>At1g10840.2 68414.m01245 eukaryotic translation initiation factor 3
subunit 3 / eIF-3 gamma / eIF3h (TIF3H1) identical to
SP|Q9C5Z2 Eukaryotic translation initiation factor 3
subunit 3 (eIF-3 gamma) (eIF3 p38 subunit) (eIF3h)
{Arabidopsis thaliana}; contains Pfam profile PF01398:
Mov34/MPN/PAD-1 family
Length = 250
Score = 113 bits (272), Expect = 1e-25
Identities = 59/159 (37%), Positives = 94/159 (59%), Gaps = 1/159 (0%)
Frame = +1
Query: 259 MMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFL 438
MMR LR VNVD+ VGWYQS +G++ ++ L+E+ +YQ +I+ V +IYD K+ G L
Sbjct: 1 MMRCLREVNVDNNTVGWYQSTVLGSYQTVELIETFMNYQENIKRCVCIIYDPSKADLGVL 60
Query: 439 TLKAYRLTPQAIAMYKEGDYTPEALRNLKIGYENLFIEVPIVIRNSPLTNIMISELTEMI 618
LKA +L+ + +Y+ G++T E LR + ++F E+PI + NS L + ++EL
Sbjct: 61 ALKALKLSDSFMELYRGGNFTGEKLREKNFSWMDIFEEIPIKVSNSALVSAFMTELETDT 120
Query: 619 PEEEGS-KFLDLGTASVLEGQLRSLMERVDELNQEAIKF 732
P +G L T LE + L++ +D+L+ E KF
Sbjct: 121 PVSQGDYDRLHSSTTPFLENNMEFLIKCMDDLSMEQQKF 159
>At5g05780.1 68418.m00636 26S proteasome non-ATPase regulatory
subunit 7, putative / 26S proteasome regulatory subunit
S12, putative / MOV34 protein, putative contains
similarity to 26s proteasome regulatory subunit s12
(proteasome subunit p40) (mov34 protein) SP:P26516 from
[Mus musculus]; contains Pfam profile PF01398:
Mov34/MPN/PAD-1 family
Length = 308
Score = 45.6 bits (103), Expect = 3e-05
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 6/137 (4%)
Frame = +1
Query: 61 TIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPFPKHDDTMD- 237
TI+ V L ++ IV H + + + + G LLG +++TN + P +D D
Sbjct: 13 TIEKVVVHPLVLLSIVDHYNRVAKDSSKRVVGVLLGSSSRGVVDVTNSYAVPFEEDDKDP 72
Query: 238 -----EEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEESVVV 402
+ Y M +R+N VGWY + G L + L+ + + V+V
Sbjct: 73 SIWFLDHNYHESMFHMFKRINAKEHVVGWYST---GPKLRENDLDVHALFNGYVPNPVLV 129
Query: 403 IYDTKKSARGFLTLKAY 453
I D + G T KAY
Sbjct: 130 IIDVQPKELGIPT-KAY 145
>At3g11270.1 68416.m01370 26S proteasome non-ATPase regulatory
subunit 7, putative / 26S proteasome regulatory subunit
S12, putative / MOV34 protein, putative contains
similarity to 26S proteasome regulatory subunit S12
(MOV34) SP:P26516 from [Mus musculus]
Length = 310
Score = 45.6 bits (103), Expect = 3e-05
Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 6/137 (4%)
Frame = +1
Query: 61 TIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPFPKHDDTMD- 237
TI+ V L ++ IV H + + + G LLG +++TN + P +D D
Sbjct: 13 TIEKVIVHPLVLLSIVDHYNRVAKDTSKRVVGVLLGSSSRGTVDVTNSYAVPFEEDDKDT 72
Query: 238 -----EEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEESVVV 402
+ Y M +R+N VGWY + G L + L+ + + V+V
Sbjct: 73 SIWFLDHNYHESMFHMFKRINAKEHIVGWYST---GPKLRENDLDVHALFNGYVPNPVLV 129
Query: 403 IYDTKKSARGFLTLKAY 453
I D + G T KAY
Sbjct: 130 IIDVQPKELGIPT-KAY 145
>At5g22355.1 68418.m02608 DC1 domain-containing protein contains
Pfam PF03107: DC1 domain; similar to ULI3 [Arabidopsis
thaliana] GI:17225050
Length = 664
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +3
Query: 297 SCWMVPECRCRQFSKPFVIRV-TISLSDLY*GECCCDLRYKEISQRILDFEGLSFDTSGY 473
S W V + RC S+P + L + + CCD YKEI +L + FD +
Sbjct: 477 SDWWVLDVRCGSRSEPVIHDGHRHPLYYEHKKDHCCDACYKEIDGYLLSCDTCDFDLDLH 536
Query: 474 C 476
C
Sbjct: 537 C 537
>At2g39990.1 68415.m04914 eukaryotic translation initiation factor 3
subunit 5 / eIF-3 epsilon / eIF3f (TIF3F1) identical to
SP|O04202 Eukaryotic translation initiation factor 3
subunit 5 (eIF-3 epsilon) (eIF3 p32 subunit) (eIF3f)
{Arabidopsis thaliana}; contains Pfam profile PF01398:
Mov34/MPN/PAD-1 family
Length = 293
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = +1
Query: 115 CHEESCSNMEVAQGALLGLVV-ENRLEITNCFPFPKHDDTMDEE----EYQLDMMRRLRR 279
C + E G LLG ++ + ++I N + P H+++ D+ +Y +M+ +
Sbjct: 41 CFVRRPDSAERVIGTLLGSILPDGTVDIRNSYAVP-HNESSDQVAVDIDYHHNMLASHLK 99
Query: 280 VNVDHFHVGWYQS 318
VN VGWY +
Sbjct: 100 VNSKETIVGWYST 112
>At5g44960.1 68418.m05514 F-box family protein contains F-box domain
Pfam:PF00646
Length = 416
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = -2
Query: 729 LDRFLIQFINTFHETAKLSF-----ENRCSTQIQKLGSFLFRY 616
LD F +QF N HE + F E+ C +++QK F+ RY
Sbjct: 47 LDLFSLQFTNPHHEEGLIKFMDRFMESNCRSRLQK---FMIRY 86
>At4g33520.3 68417.m04762 metal-transporting P-type ATPase, putative
(PAA1) nearly identical to gi:2668492; contains Pfam
heavy-metal-associated domain PF00403
Length = 949
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 152 RELSLVWSLRTVWRLPTASHFQSMTTPWMRRNTSWT**GGFEESMLIIFML 304
REL++ W+L V + +HF + PW+ S GF S+ +I +L
Sbjct: 251 RELAVSWALCAVCLVGHLTHFLGVNAPWIHAIHS----TGFHVSLCLITLL 297
>At4g33520.2 68417.m04761 metal-transporting P-type ATPase, putative
(PAA1) nearly identical to gi:2668492; contains Pfam
heavy-metal-associated domain PF00403
Length = 949
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 152 RELSLVWSLRTVWRLPTASHFQSMTTPWMRRNTSWT**GGFEESMLIIFML 304
REL++ W+L V + +HF + PW+ S GF S+ +I +L
Sbjct: 251 RELAVSWALCAVCLVGHLTHFLGVNAPWIHAIHS----TGFHVSLCLITLL 297
>At2g32260.1 68415.m03943 cholinephosphate cytidylyltransferase,
putative / phosphorylcholine transferase, putative /
CTP:phosphocholine cytidylyltransferase, putative strong
similarity to CTP:phosphocholine cytidylyltransferase
[Brassica napus] GI:1418125; contains Pfam profile
PF01467: Cytidylyltransferase
Length = 332
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 403 IYD-TKKSARGFLTLKAYRLTPQAIAMYKEGDYTPEALRNLKIGYENLFIEVPIVIRNSP 579
+Y+ KK R T + ++ I M DY +RNL GY + V V
Sbjct: 142 VYEFVKKVGRFKETQRTEGISTSDIIMRIVKDYNQYVMRNLDRGYSREDLGVSFVKEKRL 201
Query: 580 LTNIMISELTEMIPEEE 630
N+ + +L E + E++
Sbjct: 202 RVNMRLKKLQERVKEQQ 218
>At1g73680.1 68414.m08532 pathogen-responsive alpha-dioxygenase,
putative similar to pathogen-inducible alpha-dioxygenase
[Nicotiana attenuata] GI:12539609; contains Pfam profile
PF03098: Animal haem peroxidase
Length = 631
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 451 YRLTPQAIAMYKEGDYTPEALRNLKIGYENLFIEVPIVIRNSPLTNIM 594
Y LT + +++Y+ PE L + EN+ E P + R P+T ++
Sbjct: 368 YSLTEEFVSVYRMHCLLPETLILRDMNSENVDKENPAIEREIPMTELI 415
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 27.5 bits (58), Expect = 9.7
Identities = 43/173 (24%), Positives = 75/173 (43%)
Frame = +1
Query: 211 FPKHDDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEE 390
F +H M++E+Y + + VD+ V G ++L L E+ +++ E
Sbjct: 476 FNQHVFKMEQEDYTKEEINWSYIEFVDNKDVLELIEKKPGGVIAL-LDEACMFPKSTHET 534
Query: 391 SVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPEALRNLKIGYENLFIEVPIVIR 570
+Y T K+ + F K R T AI+ Y G+ T +A L + + E ++
Sbjct: 535 FAQKLYQTFKNYKRFTKPKLSR-TSFAISHYA-GEVTYQADLFLDKNKDYVVAEHQDLLI 592
Query: 571 NSPLTNIMISELTEMIPEEEGSKFLDLGTASVLEGQLRSLMERVDELNQEAIK 729
S ++ ++ L +PEE SK S + QL+SLME + I+
Sbjct: 593 AS--SDTFVAGLFPRLPEETSSKTKFSSIGSRFKLQLQSLMETLSSTEPHYIR 643
>At1g22340.1 68414.m02795 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase; similar
to UDP-glucose glucosyltransferase GI:3928543 from
[Arabidopsis thaliana]
Length = 487
Score = 27.5 bits (58), Expect = 9.7
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Frame = +1
Query: 400 VIYDTKKSARGFLT-LKAYRLTPQAIAMYKEGDYTPEALRNLKIGY----ENLFI-EVPI 561
VI+ T SA GF+T L Y + ++ +K+ Y + + I + +NL + ++P
Sbjct: 144 VIFWTN-SACGFMTILHFYLFIEKGLSPFKDESYMSKEHLDTVIDWIPSMKNLRLKDIPS 202
Query: 562 VIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVLEGQLRSLMERV 702
IR + NIM++ L + + + + L T LE + M+ +
Sbjct: 203 YIRTTNPDNIMLNFLIREVERSKRASAIILNTFDELEHDVIQSMQSI 249
>At1g11330.1 68414.m01301 S-locus lectin protein kinase family
protein contains Pfam domains, PF00954: S-locus
glycoprotein family, PF00069: Protein kinase domain, and
PF01453: Lectin (probable mannose binding)
Length = 840
Score = 27.5 bits (58), Expect = 9.7
Identities = 8/17 (47%), Positives = 15/17 (88%)
Frame = -1
Query: 466 EVSNDRPSKSRILWLIS 416
EV+NDRP+ S ++W+++
Sbjct: 778 EVANDRPNVSNVIWMLT 794
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,647,764
Number of Sequences: 28952
Number of extensions: 373505
Number of successful extensions: 946
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1604469728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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