Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10f24
         (474 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U35682-1|AAA79181.1|  163|Drosophila melanogaster signal recogni...    40   0.002
AY089689-1|AAL90427.1|  160|Drosophila melanogaster RH65975p pro...    40   0.002
AE014296-1238|AAF50575.1|  160|Drosophila melanogaster CG4457-PA...    40   0.002
AY071118-1|AAL48740.1|  560|Drosophila melanogaster RE16970p pro...    28   5.6  
AE014297-553|AAN13359.1|  505|Drosophila melanogaster CG1091-PA,...    28   5.6  
AE014297-552|AAF54068.3|  560|Drosophila melanogaster CG1091-PB,...    28   5.6  

>U35682-1|AAA79181.1|  163|Drosophila melanogaster signal
           recognition particle 19kDa protein protein.
          Length = 163

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = +1

Query: 418 RWICIYPAYLNSKKTLAEG 474
           RWICIYPAY+N KKT  EG
Sbjct: 25  RWICIYPAYINRKKTRQEG 43


>AY089689-1|AAL90427.1|  160|Drosophila melanogaster RH65975p
           protein.
          Length = 160

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = +1

Query: 418 RWICIYPAYLNSKKTLAEG 474
           RWICIYPAY+N KKT  EG
Sbjct: 22  RWICIYPAYINRKKTRQEG 40


>AE014296-1238|AAF50575.1|  160|Drosophila melanogaster CG4457-PA
           protein.
          Length = 160

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = +1

Query: 418 RWICIYPAYLNSKKTLAEG 474
           RWICIYPAY+N KKT  EG
Sbjct: 22  RWICIYPAYINRKKTRQEG 40


>AY071118-1|AAL48740.1|  560|Drosophila melanogaster RE16970p
           protein.
          Length = 560

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 322 NGNVTKKITVYNFQTFPHHC 263
           N NVTK +T Y  QTF  +C
Sbjct: 521 NHNVTKAVTKYGLQTFVDYC 540


>AE014297-553|AAN13359.1|  505|Drosophila melanogaster CG1091-PA,
           isoform A protein.
          Length = 505

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 322 NGNVTKKITVYNFQTFPHHC 263
           N NVTK +T Y  QTF  +C
Sbjct: 466 NHNVTKAVTKYGLQTFVDYC 485


>AE014297-552|AAF54068.3|  560|Drosophila melanogaster CG1091-PB,
           isoform B protein.
          Length = 560

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 322 NGNVTKKITVYNFQTFPHHC 263
           N NVTK +T Y  QTF  +C
Sbjct: 521 NHNVTKAVTKYGLQTFVDYC 540


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,529,482
Number of Sequences: 53049
Number of extensions: 320071
Number of successful extensions: 472
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)