Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10f22
(614 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 98 4e-21
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 95 5e-20
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 86 2e-17
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 77 1e-14
09_06_0359 + 22508900-22509439 74 8e-14
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 72 4e-13
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 68 7e-12
02_01_0160 + 1116160-1116678 67 9e-12
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 61 6e-10
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 49 3e-06
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 48 4e-06
10_01_0309 + 3417602-3418147 46 2e-05
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 45 6e-05
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 43 2e-04
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 42 3e-04
06_01_0214 + 1634171-1634173,1634263-1634742 40 0.001
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 39 0.003
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 37 0.015
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 33 0.18
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 29 2.2
06_01_1095 + 8984363-8984789,8985175-8985416,8985500-8985622,898... 29 2.2
10_01_0310 + 3425099-3425218 29 3.9
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 28 6.8
11_06_0322 + 22358505-22358642,22358690-22358791,22359444-223595... 27 8.9
01_06_1547 - 38150814-38151488,38151608-38151666,38151774-381519... 27 8.9
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 98.3 bits (234), Expect = 4e-21
Identities = 51/107 (47%), Positives = 67/107 (62%), Gaps = 5/107 (4%)
Frame = +2
Query: 221 FIASAKSD--EIPKGPKVTHKVSFDMKIGDD---NIGTIVIGLFGKTVPKTTENFFQLAQ 385
F++SA +D E+ K+T+KV FD+ IG+ N+G +VIGL+G VP+T ENF L
Sbjct: 64 FVSSATADPKEVDLQSKITNKVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCT 123
Query: 386 KPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRXIYGERFEDENF 526
+G GYKGS FHRVIK+FMIQ + IYG F+DENF
Sbjct: 124 GEKGFGYKGSSFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENF 170
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/36 (58%), Positives = 24/36 (66%)
Frame = +1
Query: 505 TF*R*KLQLKHYGAGWLSMANAGKDTNGSQFFXXTV 612
TF +L H G G +SMANAG +TNGSQFF TV
Sbjct: 164 TFKDENFKLVHTGPGVVSMANAGPNTNGSQFFICTV 199
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 94.7 bits (225), Expect = 5e-20
Identities = 45/89 (50%), Positives = 56/89 (62%)
Frame = +2
Query: 263 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNF 442
KV K FD+++G + G IVIGLFG+ VPKT +NF L +G GYKG FHR+IK+F
Sbjct: 63 KVNSKCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDKGYGYKGCSFHRIIKDF 122
Query: 443 MIQXXXXXXXXXXXXRXIYGERFEDENFS 529
MIQ R IYGE F+DENF+
Sbjct: 123 MIQGGDFQNNNGTGGRSIYGECFDDENFT 151
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/28 (78%), Positives = 22/28 (78%)
Frame = +1
Query: 529 LKHYGAGWLSMANAGKDTNGSQFFXXTV 612
LKH G G LSMANAG DTNGSQFF TV
Sbjct: 152 LKHTGPGVLSMANAGPDTNGSQFFICTV 179
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 85.8 bits (203), Expect = 2e-17
Identities = 49/110 (44%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Frame = +2
Query: 218 LFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEG 397
L +A AK + +VTHKV FD++I G +V+GLFGKTVPKT ENF L +G
Sbjct: 34 LALAQAKKSKADL-TEVTHKVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKG 92
Query: 398 EG-------YKGSKFHRVIKNFMIQXXXXXXXXXXXXRXIYGERFEDENF 526
G +KGS FHR+I +FMIQ IYG +F DENF
Sbjct: 93 TGKSGKALHFKGSAFHRIIPSFMIQGGDFTLGDGRGGESIYGTKFADENF 142
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +1
Query: 526 QLKHYGAGWLSMANAGKDTNGSQFFXXTV 612
++KH G G LSMANAG+DTNGSQFF TV
Sbjct: 143 KIKHTGPGLLSMANAGRDTNGSQFFITTV 171
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 76.6 bits (180), Expect = 1e-14
Identities = 44/95 (46%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Frame = +2
Query: 263 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKF 421
KVT KV FD+ I G IV+GLFG TVPKT ENF + +G G YKG+ F
Sbjct: 37 KVTTKVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPF 96
Query: 422 HRVIKNFMIQXXXXXXXXXXXXRXIYGERFEDENF 526
HR+I FMIQ IYG F DENF
Sbjct: 97 HRIIPGFMIQGGDTVSGNGTGCDSIYGGMFPDENF 131
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = +1
Query: 526 QLKHYGAGWLSMANAGKDTNGSQFFXXTV 612
++ H G LSMAN KDTNGSQFF TV
Sbjct: 132 KINHSAPGLLSMANYAKDTNGSQFFITTV 160
>09_06_0359 + 22508900-22509439
Length = 179
Score = 74.1 bits (174), Expect = 8e-14
Identities = 42/91 (46%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Frame = +2
Query: 275 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 433
KV FD+ IG G +V+ LF TVPKT ENF L +G G YKGS FHR+I
Sbjct: 7 KVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRII 66
Query: 434 KNFMIQXXXXXXXXXXXXRXIYGERFEDENF 526
NFM Q IYG+RF DENF
Sbjct: 67 PNFMCQGGDFTRGNGTGGESIYGDRFADENF 97
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +1
Query: 526 QLKHYGAGWLSMANAGKDTNGSQFFXXT 609
+L+H G G LSMANAG +TNGSQFF T
Sbjct: 98 KLRHTGPGVLSMANAGPNTNGSQFFICT 125
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 71.7 bits (168), Expect = 4e-13
Identities = 43/97 (44%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Frame = +2
Query: 251 PKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA---QKPEG--EGYKGS 415
P PK V FD+ IG G I + LF VPKT ENF Q + G +GYKG
Sbjct: 31 PPNPK-NPVVFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGEHRKSGLPQGYKGC 89
Query: 416 KFHRVIKNFMIQXXXXXXXXXXXXRXIYGERFEDENF 526
+FHRVIK+FMIQ IYG +F+DENF
Sbjct: 90 QFHRVIKDFMIQGGDYMKGDGTGCTSIYGTKFDDENF 126
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 67.7 bits (158), Expect = 7e-12
Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 7/71 (9%)
Frame = +2
Query: 260 PKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSK 418
P VT++V D++I +IG IVIGL+G VPKT NF L EG G YKGS+
Sbjct: 34 PAVTNRVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSR 93
Query: 419 FHRVIKNFMIQ 451
FHR+I FMIQ
Sbjct: 94 FHRIIPGFMIQ 104
Score = 31.1 bits (67), Expect = 0.73
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 553 LSMANAGKDTNGSQFFXXTV 612
++MAN+G D+NGSQF+ T+
Sbjct: 118 IAMANSGPDSNGSQFYITTI 137
>02_01_0160 + 1116160-1116678
Length = 172
Score = 67.3 bits (157), Expect = 9e-12
Identities = 39/91 (42%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Frame = +2
Query: 275 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 433
+V FDM +G G IV+ L+ K VP+T ENF L +G G YKGS FHRVI
Sbjct: 5 RVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVI 64
Query: 434 KNFMIQXXXXXXXXXXXXRXIYGERFEDENF 526
FM Q IYGE+F DE F
Sbjct: 65 PEFMCQGGDFTRGNGTGGESIYGEKFADEVF 95
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1
Query: 526 QLKHYGAGWLSMANAGKDTNGSQFFXXTV 612
+ KH G LSMANAG +TNGSQFF TV
Sbjct: 96 KFKHDSPGILSMANAGPNTNGSQFFICTV 124
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 61.3 bits (142), Expect = 6e-10
Identities = 38/91 (41%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Frame = +2
Query: 278 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVI 433
V D+ IGD+ +V LF P+T ENF L G G YKGS FHRVI
Sbjct: 9 VFMDVSIGDEPDERMVFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGSLFHRVI 68
Query: 434 KNFMIQXXXXXXXXXXXXRXIYGERFEDENF 526
K FM Q IYG FEDENF
Sbjct: 69 KGFMAQGGDFSNGDGSGGESIYGGTFEDENF 99
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1
Query: 529 LKHYGAGWLSMANAGKDTNGSQFF 600
L+H G LSMANAG +TNGSQFF
Sbjct: 101 LRHDERGLLSMANAGPNTNGSQFF 124
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 49.2 bits (112), Expect = 3e-06
Identities = 31/76 (40%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +2
Query: 248 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------- 403
+PK K H V FD+ IG I LF VPKTTENF L G G
Sbjct: 1 MPKAKKNPH-VFFDIAIGGRAAERITFELFADVVPKTTENFRALCTGERGLGVSTQKPLY 59
Query: 404 YKGSKFHRVIKNFMIQ 451
+KG+ HR++K FM Q
Sbjct: 60 FKGTNMHRILKGFMAQ 75
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 48.4 bits (110), Expect = 4e-06
Identities = 40/135 (29%), Positives = 52/135 (38%), Gaps = 22/135 (16%)
Frame = +2
Query: 188 GTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTEN 367
GT T A +A+ K +E + D+ IG D G IV+ L+ P+T EN
Sbjct: 7 GTTTAAAAAA--VAAGKEEEAEVVVVRNPRCYLDVSIGGDMEGRIVVELYASVAPRTAEN 64
Query: 368 FFQLAQKPEGEGY----------------------KGSKFHRVIKNFMIQXXXXXXXXXX 481
F L +G KGS HR++K FM+Q
Sbjct: 65 FRALCTGEKGVSAATGVPLHYKISLKAASVCTRWTKGSCIHRIVKGFMVQGGDITAGDGT 124
Query: 482 XXRXIYGERFEDENF 526
IYG FEDENF
Sbjct: 125 GGESIYGLNFEDENF 139
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/27 (74%), Positives = 20/27 (74%)
Frame = +1
Query: 529 LKHYGAGWLSMANAGKDTNGSQFFXXT 609
LKH G LSMANAG DTNGSQFF T
Sbjct: 141 LKHERKGMLSMANAGPDTNGSQFFITT 167
>10_01_0309 + 3417602-3418147
Length = 181
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Frame = +2
Query: 263 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--QKPEGEG-----YKGSKF 421
K +V D+ IG + +G +VI L VP T ENF +L ++ G YKGS F
Sbjct: 8 KSNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAF 67
Query: 422 HRVIKNFMIQ 451
HRV+ FM Q
Sbjct: 68 HRVVPGFMCQ 77
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +1
Query: 529 LKHYGAGWLSMANAGKDTNGSQFF 600
+KH G G +SMANAG +TNGSQFF
Sbjct: 107 VKHDGPGVVSMANAGPNTNGSQFF 130
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +1
Query: 526 QLKHYGAGWLSMANAGKDTNGSQFF 600
+LKH GAG LSMANAG +TNGSQFF
Sbjct: 87 ELKHTGAGILSMANAGPNTNGSQFF 111
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = +2
Query: 302 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 481
+ ++G I ++ K PKT NF +L+++ Y FHR+IK+F++Q
Sbjct: 15 ETSMGAFTIEMYYKHAPKTCRNFLELSRRGY---YDNVIFHRIIKDFIVQ-GGDPTGTGR 70
Query: 482 XXRXIYGERFEDE 520
IYG +FEDE
Sbjct: 71 GGESIYGAKFEDE 83
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +2
Query: 407 KGSKFHRVIKNFMIQXXXXXXXXXXXXRXIYGERFEDENF 526
+GS FHRVIK FM+Q IYG +FEDENF
Sbjct: 118 QGSCFHRVIKGFMVQGGDITAGDGTGGESIYGLKFEDENF 157
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +1
Query: 529 LKHYGAGWLSMANAGKDTNGSQFFXXT 609
LKH G LSMAN+G +TNGSQFF T
Sbjct: 159 LKHERKGMLSMANSGPNTNGSQFFITT 185
Score = 36.7 bits (81), Expect = 0.015
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 224 IASAKSDEIP-KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE 400
+ASA + E+ K P+ D+ IG + G IVI L+ VP+T ENF L +G
Sbjct: 13 VASAAAAEVEVKNPRCF----MDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGV 68
Query: 401 GYKGSKFHRVIKNF 442
G K H K+F
Sbjct: 69 GAVTGK-HLHYKDF 81
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/69 (40%), Positives = 34/69 (49%)
Frame = +2
Query: 314 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRX 493
G + I L+ K PK NF QL EG Y G+ FHRVIK+F++Q
Sbjct: 22 GPLDIELWPKEAPKAVRNFVQLCL--EGY-YDGTLFHRVIKSFLVQ-GGDPTGSGTGGES 77
Query: 494 IYGERFEDE 520
IYG F DE
Sbjct: 78 IYGAPFADE 86
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/71 (36%), Positives = 33/71 (46%)
Frame = +2
Query: 308 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 487
N+G I +F P+T ENF L Y G+ FHR IK FMIQ
Sbjct: 8 NLGDIKCEVFCDQAPRTAENFLALCASGY---YDGTIFHRNIKGFMIQ-GGDPTGTGKGG 63
Query: 488 RXIYGERFEDE 520
I+G++F DE
Sbjct: 64 TSIWGKKFADE 74
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +1
Query: 529 LKHYGAGWLSMANAGKDTNGSQFF 600
LKH G +SMAN+G +TNGSQFF
Sbjct: 79 LKHNARGVMSMANSGPNTNGSQFF 102
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/71 (36%), Positives = 34/71 (47%)
Frame = +2
Query: 308 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 487
++G I + L+ + PKT ENF + Y FHRVIK FMIQ
Sbjct: 503 SMGDIHLRLYPEECPKTVENFTTHCRNGY---YDNLIFHRVIKGFMIQ-TGDPLGDGTGG 558
Query: 488 RXIYGERFEDE 520
+ I+G FEDE
Sbjct: 559 QSIWGREFEDE 569
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +1
Query: 529 LKHYGAGWLSMANAGKDTNGSQFFXXTV 612
L+H LSMANAG +TNGSQFF TV
Sbjct: 574 LRHDRPFTLSMANAGPNTNGSQFFITTV 601
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 36.7 bits (81), Expect = 0.015
Identities = 31/92 (33%), Positives = 38/92 (41%)
Frame = +2
Query: 245 EIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFH 424
++ K PK V GD N+ L P+T ENF E Y G FH
Sbjct: 336 KVEKNPKKKGYVQLHTTHGDLNLE-----LHCDITPRTCENFLTHC---ENGYYNGLIFH 387
Query: 425 RVIKNFMIQXXXXXXXXXXXXRXIYGERFEDE 520
R IKNFMIQ I+G+ F+DE
Sbjct: 388 RSIKNFMIQ-GGDPTGTGSGGESIWGKPFKDE 418
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 526 QLKHYGAGWLSMANAGKDTNGSQFF 600
+L H G G +SMAN+G TNGSQFF
Sbjct: 422 KLIHSGRGVVSMANSGPHTNGSQFF 446
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2
Query: 308 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 451
++G I + L P TT+NF +L + + Y G FH+V K+F+ Q
Sbjct: 8 SVGDIEVDLHTDMCPLTTKNFLKLCKM---KYYNGCLFHKVEKDFLAQ 52
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 529 LKHYGAGWLSMANAGKDTNGSQFF 600
L+H G ++MA+AG++ N SQF+
Sbjct: 86 LRHSKKGTIAMASAGENCNASQFY 109
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 526 QLKHYGAGWLSMANAGKDTNGSQFF 600
+L+H G ++MA+AG++ N SQF+
Sbjct: 115 ELRHSKMGTIAMASAGENCNASQFY 139
>06_01_1095 +
8984363-8984789,8985175-8985416,8985500-8985622,
8985783-8985899,8986258-8986399,8986587-8986627,
8987194-8987453,8987505-8987607,8987698-8987776,
8987856-8988115
Length = 597
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -2
Query: 523 VFIFKTFTIYXAPSSSITLGKITTLDHEIFN---YSVELAPFVPLPLRFLS 380
V + TI A + S+ T LD ++FN +++ PFVPL L+ L+
Sbjct: 132 VVLLNLVTIVFASNISVVKEAETMLDPDLFNVLRFTISAIPFVPLLLKALN 182
>10_01_0310 + 3425099-3425218
Length = 39
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 314 GTIVIGLFGKTVPKTTENF 370
G++VI F VPKTTENF
Sbjct: 8 GSVVIEQFADKVPKTTENF 26
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 314 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 451
G+I I ++ + F L + +KG F VIKNF+IQ
Sbjct: 103 GSITIEIYKDASADVVDRFVSLCKSNH---FKGMPFRHVIKNFVIQ 145
>11_06_0322 +
22358505-22358642,22358690-22358791,22359444-22359557,
22359643-22359791,22360155-22360227,22360308-22360397,
22360752-22360791,22361579-22361661,22362614-22362775
Length = 316
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +2
Query: 314 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 451
G I G F PKT E+ ++L + Y + F RV K F+ Q
Sbjct: 84 GDIEFGFFPHVAPKTVEHIYKLVRL---GCYNTNHFFRVDKGFVAQ 126
>01_06_1547 -
38150814-38151488,38151608-38151666,38151774-38151919,
38152078-38152274,38152542-38152920,38153000-38153031
Length = 495
Score = 27.5 bits (58), Expect = 8.9
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = +2
Query: 188 GTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTEN 367
G + L ILL+I S KSD K V H + IGDD + +I L K V T+ N
Sbjct: 349 GEPQLELLILLYIISLKSDAYDKLASVAHDL-----IGDDEVDSISSVL--KVVRVTSSN 401
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,548,105
Number of Sequences: 37544
Number of extensions: 261112
Number of successful extensions: 490
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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