Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10f21
(548 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 29 0.45
SPAC9.07c |||GTPase Rbg1 |Schizosaccharomyces pombe|chr 1|||Manual 29 0.60
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 29 0.60
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 29 0.60
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 28 0.79
SPBC1604.08c |imp1||importin alpha|Schizosaccharomyces pombe|chr... 28 1.0
SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2 |Schizosacch... 27 1.4
SPBC18H10.15 |ppk23||serine/threonine protein kinase Ppk23|Schiz... 27 1.8
SPAPYUG7.02c |sin1||stress activated MAP kinase interacting prot... 27 1.8
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 27 1.8
SPAC1039.04 |||nicotinic acid plasma membrane transporter |Schiz... 27 2.4
SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces pomb... 27 2.4
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 27 2.4
SPAC17G8.13c |mst2||histone acetyltransferase Mst2|Schizosacchar... 26 3.2
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 26 3.2
SPBC354.01 |gtp1|SPBC649.06|GTP binding protein Gtp1|Schizosacch... 26 3.2
SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces pom... 26 3.2
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 26 4.2
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 26 4.2
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 26 4.2
SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces p... 25 5.6
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 25 5.6
SPBC12D12.01 |sad1|SPBC16H5.01c|spindle pole body protein Sad1|S... 25 5.6
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 25 7.3
SPAPJ760.03c |adg1||sequence orphan|Schizosaccharomyces pombe|ch... 25 7.3
SPAC1071.08 |rpp203|rpp2-3, rla6|60S acidic ribosomal protein P2... 25 7.3
SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr 1|||Ma... 25 9.7
SPAC25B8.02 |||histone deacetylase complex subunit Sds3 |Schizos... 25 9.7
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 25 9.7
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 25 9.7
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 29.1 bits (62), Expect = 0.45
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 125 EEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEK 262
++K+K K ++D S K +G++S K+ DD+ E EK
Sbjct: 100 KKKKKQQKKKKVTGKRDLDNQSSDNEKLEGLESSKNIDDDIDEIEK 145
>SPAC9.07c |||GTPase Rbg1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 366
Score = 28.7 bits (61), Expect = 0.60
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +2
Query: 230 STTDDLKEFEKIKINTEKNKSISERVSIFKGDITKLEIDAVVNAANSRLKAGGGV 394
+T +KE E T+KNK+ ++ + + K + KL+ + + GGG+
Sbjct: 3 TTAQKIKEVEDEMAKTQKNKATAKHLGMLKAKLAKLKRELITPTGGG---GGGGL 54
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 28.7 bits (61), Expect = 0.60
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Frame = +2
Query: 89 EIEKNRILKLS-LEEKRKIYKSS--DFIDLENVDPWSKYLNKSQG---IDSKKSTTDDLK 250
EI +N +LK+S LE +K Y+ D L++VD + L+K + +
Sbjct: 1155 EIHENLLLKVSDLENYKKKYEGLQLDLEGLKDVDTNFQELSKKHRDLTFNHESLLRQSAS 1214
Query: 251 EFEKIKINTEKNKSISERVSIFKGDITKL 337
EK+ + + +NK +S +VS + +L
Sbjct: 1215 YKEKLSLASSENKDLSNKVSSLTKQVNEL 1243
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 28.7 bits (61), Expect = 0.60
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -3
Query: 453 PIESHSACKKGPAARCMAPSTPPPAFSLELA-AFTTASISSLVMSPLKIETRSEMDL 286
P ES ++ G + PS+PPP FS E A A I L L +E DL
Sbjct: 16 PFESENS-SLGATPLSLPPSSPPPEFSDEAAEALVEEDIEDLDGEALDVEDEEGEDL 71
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 28.3 bits (60), Expect = 0.79
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +2
Query: 176 VDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDITKLE 340
+D S YL++ + ++S + ++ L + K ++ K KSIS+ K +I +LE
Sbjct: 220 IDSSSNYLSRIEMLESSLAKSNSLLDSSKSEMEALKAKSISDATK-HKNEIFQLE 273
>SPBC1604.08c |imp1||importin alpha|Schizosaccharomyces pombe|chr
2|||Manual
Length = 539
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/43 (27%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = +2
Query: 101 NRILKLSLEEKRKIYKSSDF---IDLENVDPWSKYLNKSQGID 220
N+I++++L+ I K + +DLEN++ ++ Y+ ++ G+D
Sbjct: 433 NKIIQVALDAIENILKVGEMDRTMDLENINQYAVYVEEAGGMD 475
>SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 27.5 bits (58), Expect = 1.4
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 50 CFSVATMVNSTKWEIEKNRILKLSLEEKRKIYKSSDFIDLEN 175
C SV N T + K ILK+ +EEK K ++ LEN
Sbjct: 932 CNSVLRTQNLTSESLNKLHILKVGIEEKAISLKLNELPFLEN 973
>SPBC18H10.15 |ppk23||serine/threonine protein kinase
Ppk23|Schizosaccharomyces pombe|chr 2|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 1.8
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 71 VNSTKWEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLK 250
+ + K E E + +L + KRKI + + + N+D YL + ++ DD +
Sbjct: 16 IENQKLEEEWRKKRRLEKKRKRKILEEEEKAEERNIDACRLYLMGNTPELKSCNSIDDYE 75
Query: 251 EFEKIK 268
EKI+
Sbjct: 76 ILEKIE 81
>SPAPYUG7.02c |sin1||stress activated MAP kinase interacting protein
Sin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +2
Query: 197 LNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKG 322
+NK++ + + K+ T L+ + K N+ +N ++E + F G
Sbjct: 242 VNKARSVSNAKAPTSALRALLEHKENSSQNGPLAENFATFSG 283
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 27.1 bits (57), Expect = 1.8
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +2
Query: 197 LNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDITKLEIDAVVNAANSRL 376
L KS G K S K ++ + + E+N+ + V + + ITKLE + V ++
Sbjct: 355 LEKSIGDTLKSSIRSSPKSKKRSREDFEENEDYNAMVPVKRSRITKLESE--VYYEKRKV 412
Query: 377 KAGGGV 394
+A GG+
Sbjct: 413 RALGGI 418
>SPAC1039.04 |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 215 IDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDIT 331
+++ TD+ K K++I + + +ISE++S FK +T
Sbjct: 245 VETANFLTDEEKTLAKMRIENDSSSAISEKLS-FKQSLT 282
>SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 26.6 bits (56), Expect = 2.4
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +2
Query: 161 IDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEK 262
ID E +DPW NK+ + + + D +++
Sbjct: 150 IDCETLDPWPSMQNKATSVTIRNTPASDFHVYKE 183
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/41 (29%), Positives = 27/41 (65%)
Frame = +2
Query: 215 IDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDITKL 337
++S K ++L+E ++K+ E+N S+ +++S KG++ L
Sbjct: 652 LESLKRENEELRE--QLKVEHEENISMQKQLSELKGELNTL 690
>SPAC17G8.13c |mst2||histone acetyltransferase
Mst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 407
Score = 26.2 bits (55), Expect = 3.2
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +2
Query: 62 ATMVNSTKWEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDS-KKSTT 238
AT++ ST + I+K R + ++L + + L K Q S +
Sbjct: 3 ATILKSTA-SSKTLLIIKFDTNSSRYPFYKKHLLELNSESTFLGLLTKGQADTSITRLNQ 61
Query: 239 DDLKEFEKIKINTEKNKSIS 298
DD++ FEK K ++ K ++
Sbjct: 62 DDVRLFEKAKTVADRTKDVA 81
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +2
Query: 92 IEKNRILKLSLEEKRKIYKSSDFIDLENVDP----WSKYLNKSQ 211
++K +L+L +E +YK+ + + V+P W+ YL + Q
Sbjct: 335 LKKKYVLQLKRDELENVYKAWNIKHPQRVNPKLLRWTPYLGEEQ 378
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 152 SDFIDLENVDPWSKYLNKSQG 214
S F DLE+ D S+YLN++ G
Sbjct: 579 SGFDDLEDTDSTSQYLNENSG 599
>SPBC354.01 |gtp1|SPBC649.06|GTP binding protein
Gtp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 239 DDLKEFEKIKINTEKNKSISERVSIFKGDITKLEIDAVVNAANSRLKAGG 388
+ ++E E T+KNK+ + + KG + KL + + S K G
Sbjct: 5 EKIQEIEAEMRRTQKNKATEYHLGLLKGKLAKLRAQLLEPTSKSGPKGEG 54
>SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1325
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 164 DLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTE 280
D+ + S + K+ GIDSKKS T + E + I+ E
Sbjct: 875 DVSDTSDRSPFSFKAFGIDSKKSPTPEPTEMAESNISEE 913
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 25.8 bits (54), Expect = 4.2
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 5/129 (3%)
Frame = +2
Query: 35 LAQIRCFSVATMVNSTKWEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQG 214
+ QIR V ++++ W I +NR+ + RK + L NV+ + KS
Sbjct: 1299 ILQIRETDVPGILHA--WVIIRNRLTSIRFIVNRKFFVCFKDETLPNVEIEGCLIEKSNA 1356
Query: 215 IDSKKSTTDD--LKEFEKIKINTEK--NKSISERVSIFKGDITKLE-IDAVVNAANSRLK 379
I ST+D L E + TEK I S+ T++E I+ ++ SR +
Sbjct: 1357 ILPHGSTSDKLFLLEIPEKSYLTEKVSISMIFAHPSVSGIYETRIEPIERLILEMGSRKR 1416
Query: 380 AGGGVDGAI 406
V GA+
Sbjct: 1417 FNNSVPGAL 1425
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 25.8 bits (54), Expect = 4.2
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +2
Query: 155 DFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEKN 286
D D NVD + + +D STT+ K EK+ N N
Sbjct: 169 DMNDKINVDEAAAKSDSKLNVDQINSTTESEKRVEKVNPNIANN 212
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 439 MRFYRRMSNREMPKLLVVTIYQLNISST 522
+RF +S+ E P L +T+Y L ++ST
Sbjct: 164 LRFEDNLSDLEKPYSLGLTLYSLRVTST 191
>SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 472
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 191 KYLNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDITKLEIDAV 352
K++ + + I D K+ EKIK+ +KNK V++++ +I + DA+
Sbjct: 150 KHMREFEQIKKSAMRYDRQKQKEKIKMVEQKNKRNLYLVNVWEREILRNWPDAL 203
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 80 TKWEIEKNRILKLSLEEKRKIYKSSDFID 166
+KW E R L+L EE R++ S F D
Sbjct: 449 SKWVGEAERQLRLLFEEARRVQPSIIFFD 477
>SPBC12D12.01 |sad1|SPBC16H5.01c|spindle pole body protein
Sad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 95 EKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKS 208
+K LK SL+E+ YKSS ++E D W ++ +
Sbjct: 265 QKVEQLKQSLKEEMSNYKSSVPFEVELNDDWKFFIEST 302
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 461 PTGRCQSYWWLQFTS*IYHPHCWAPRWI 544
P+GR Q+ L + +HP W P W+
Sbjct: 76 PSGRFQTNTRLCLSFSDFHPKSWNPSWM 103
>SPAPJ760.03c |adg1||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 166
Score = 25.0 bits (52), Expect = 7.3
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = -3
Query: 474 HLPVGHPPIESHS 436
H+P G+PP+++H+
Sbjct: 115 HVPTGNPPVDTHN 127
>SPAC1071.08 |rpp203|rpp2-3, rla6|60S acidic ribosomal protein P2C
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 110
Score = 25.0 bits (52), Expect = 7.3
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +2
Query: 269 INTEKNKSISERVSIFKGDITKLEIDAVVNAANSRL---KAGGGVDGAIHRAAG 421
++T +S SERV ++ +ID ++ A N +L +GG A AAG
Sbjct: 27 LSTVGIESESERVEALIKELDGKDIDELIAAGNEKLATVPSGGAAAAAAPAAAG 80
>SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 899
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 47 RCFSVATMVNSTKWEIEKNRILKLSLEEKRKIYKSSD 157
R S A + KWE + N +K +L E++K +KS +
Sbjct: 617 RSESQAALNRRVKWENDFNNKIK-ALREEKKAWKSEE 652
>SPAC25B8.02 |||histone deacetylase complex subunit Sds3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 98 KNRILKLSLEEKRKIYKSSDFIDL 169
K +L E+KRKIY++ D D+
Sbjct: 102 KEMVLSHLNEKKRKIYEAKDMFDI 125
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 24.6 bits (51), Expect = 9.7
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -3
Query: 468 PVGHPPIESHSACKKGPAARC-MAPSTPPPAFS 373
P G PP S+SA PAA A P PA S
Sbjct: 59 PSGPPPSYSNSAAPATPAASASSAAPAPAPAAS 91
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 203 KSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDI 328
+S+G+ KKS L+E +K + N S++ IF D+
Sbjct: 490 RSEGLLGKKSKKKLLRESQKPSSSDSDNASLTRIDKIFINDV 531
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,265,832
Number of Sequences: 5004
Number of extensions: 44839
Number of successful extensions: 184
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 227943826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -