Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10f21
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   1.2  
AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...    25   1.6  
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    25   1.6  
DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    23   8.8  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 13/55 (23%), Positives = 29/55 (52%)
 Frame = +2

Query: 131 KRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSI 295
           +RK++ S+  ID++       +L   QGI   + +      FE++  N+++N+ +
Sbjct: 285 ERKVWNSASLIDVDRDGKDELWLTGPQGIMGFRISNG---RFEQVPFNSDQNEDL 336


>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 18/52 (34%), Positives = 21/52 (40%)
 Frame = -3

Query: 474 HLPVGHPPIESHSACKKGPAARCMAPSTPPPAFSLELAAFTTASISSLVMSP 319
           H PV H  ++ H A    P A   AP     A     AA    S SS+V  P
Sbjct: 176 HAPVAHATVQHHHA---APIAHYAAPIAHHAAPIAHHAAPIAHSTSSIVHGP 224


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 18/52 (34%), Positives = 21/52 (40%)
 Frame = -3

Query: 474 HLPVGHPPIESHSACKKGPAARCMAPSTPPPAFSLELAAFTTASISSLVMSP 319
           H PV H  ++ H A    P A   AP     A     AA    S SS+V  P
Sbjct: 176 HAPVAHATVQHHHA---APIAHYAAPIAHHAAPIAHHAAPIAHSTSSIVHGP 224


>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 481 TLASPCWTSAYRIAFC 434
           TLA   W  A RI+FC
Sbjct: 100 TLAPSLWPPAERISFC 115


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,735
Number of Sequences: 2352
Number of extensions: 9968
Number of successful extensions: 37
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)