Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10f21
         (548 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    32   0.003
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    32   0.003
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    22   3.6  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   6.2  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    21   8.2  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    21   8.2  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    21   8.2  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    21   8.2  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    21   8.2  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    21   8.2  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 32.3 bits (70), Expect = 0.003
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = -3

Query: 135 LFSSNESLRILFFSISHLVELTIVATEKQRICARIYSAPKLPKL 4
           L SS++S +    SI +     +  TE+QRI  R Y AP+L KL
Sbjct: 535 LESSHDSFQAALRSIENYYSGKLERTEEQRIALRKYHAPRLAKL 578



 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 204 LLRYLLQGSTFSKSMKSEDL*IFLFSSNESLRIL 103
           L  YL+  ST+   + +  L  F+ S+ +  RI+
Sbjct: 290 LQTYLINASTYLNEVHTASLRKFILSAFDMARII 323


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 32.3 bits (70), Expect = 0.003
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = -3

Query: 135 LFSSNESLRILFFSISHLVELTIVATEKQRICARIYSAPKLPKL 4
           L SS++S +    SI +     +  TE+QRI  R Y AP+L KL
Sbjct: 573 LESSHDSFQAALRSIENYYSGKLERTEEQRIALRKYHAPRLAKL 616



 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 204 LLRYLLQGSTFSKSMKSEDL*IFLFSSNESLRIL 103
           L  YL+  ST+   + +  L  F+ S+ +  RI+
Sbjct: 328 LQTYLINASTYLNEVHTASLRKFILSAFDMARII 361


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 420 PAARCMAPSTPPPAF 376
           P  RC+ P TP P F
Sbjct: 146 PRFRCIGPPTPFPRF 160


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -3

Query: 468 PVGHPPIESHSACKKGPAARCMAPSTP 388
           P G  P  S S+    PAAR  +   P
Sbjct: 64  PTGSSPQHSGSSASTSPAARTTSSMYP 90


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 205 KSRN*FQEKHHRRFEGV*EDKDKHREE 285
           + RN    K  RR+E +  +K+K  EE
Sbjct: 6   RDRNREYRKKDRRYEKLHNEKEKFLEE 32


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 205 KSRN*FQEKHHRRFEGV*EDKDKHREE 285
           + RN    K  RR+E +  +K+K  EE
Sbjct: 6   RDRNREYRKKDRRYEKLHNEKEKFLEE 32


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 205 KSRN*FQEKHHRRFEGV*EDKDKHREE 285
           + RN    K  RR+E +  +K+K  EE
Sbjct: 6   RDRNREYRKKDRRYEKLHNEKEKFLEE 32


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 205 KSRN*FQEKHHRRFEGV*EDKDKHREE 285
           + RN    K  RR+E +  +K+K  EE
Sbjct: 6   RDRNREYRKKDRRYEKLHNEKEKFLEE 32


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 205 KSRN*FQEKHHRRFEGV*EDKDKHREE 285
           + RN    K  RR+E +  +K+K  EE
Sbjct: 6   RDRNREYRKKDRRYEKLHNEKEKFLEE 32


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 205 KSRN*FQEKHHRRFEGV*EDKDKHREE 285
           + RN    K  RR+E +  +K+K  EE
Sbjct: 6   RDRNREYRKKDRRYEKLHNEKEKFLEE 32


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,692
Number of Sequences: 438
Number of extensions: 3413
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)