Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10f21
(548 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g40600.1 68415.m05008 appr-1-p processing enzyme family prote... 66 2e-11
At1g69340.1 68414.m07956 appr-1-p processing enzyme family prote... 54 8e-08
At5g01310.1 68418.m00043 basic helix-loop-helix (bHLH) family pr... 41 5e-04
At2g38090.1 68415.m04676 myb family transcription factor contain... 37 0.008
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 37 0.010
At4g32630.1 68417.m04645 hypothetical protein 32 0.29
At3g03800.1 68416.m00390 syntaxin, putative (SYP131) similar to ... 31 0.51
At5g52280.1 68418.m06488 protein transport protein-related low s... 30 1.2
At5g60590.2 68418.m07599 yrdC protein-related 29 1.5
At5g60590.1 68418.m07598 yrdC protein-related 29 1.5
At4g39520.1 68417.m05588 GTP-binding protein, putative similar t... 29 1.5
At3g28770.1 68416.m03591 expressed protein 29 2.0
At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identica... 29 2.7
At4g16210.1 68417.m02460 enoyl-CoA hydratase/isomerase family pr... 29 2.7
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 28 3.6
At2g35630.1 68415.m04369 microtubule organization 1 protein (MOR... 28 3.6
At5g17040.1 68418.m01997 UDP-glucoronosyl/UDP-glucosyl transfera... 28 4.7
At3g18290.1 68416.m02326 zinc finger protein-related weak alignm... 28 4.7
At1g65070.1 68414.m07377 DNA mismatch repair MutS family protein... 28 4.7
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 28 4.7
At1g58050.1 68414.m06579 helicase domain-containing protein cont... 27 6.2
At5g60520.1 68418.m07589 late embryogenesis abundant protein-rel... 27 8.3
At4g32640.1 68417.m04646 sec23/sec24 transport protein-related 27 8.3
At2g21410.1 68415.m02548 vacuolar proton ATPase, putative simila... 27 8.3
At1g58060.1 68414.m06580 helicase domain-containing protein cont... 27 8.3
>At2g40600.1 68415.m05008 appr-1-p processing enzyme family protein
contains Pfam domain PF01661: Appr-1-p processing enzyme
family
Length = 257
Score = 65.7 bits (153), Expect = 2e-11
Identities = 37/75 (49%), Positives = 44/75 (58%), Gaps = 10/75 (13%)
Frame = +2
Query: 284 NKSISERVSIFKGDITKLEID----AVVNAANSRLKAGGGVDGAIHRAAGPFLQAECDSI 451
N S S + I KGDITK +D A+VN AN R+ GGG DGAIHRAAGP L+A C +
Sbjct: 75 NLSDSSLLKILKGDITKWSVDSSSDAIVNPANERMLGGGGADGAIHRAAGPQLRAACYEV 134
Query: 452 G------GCPTGRCQ 478
CPTG +
Sbjct: 135 PEVRPGVRCPTGEAR 149
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +3
Query: 468 GDAKVTGGYNLPAKYIIHTVGP 533
G+A++T G+NLPA +IHTVGP
Sbjct: 146 GEARITPGFNLPASRVIHTVGP 167
>At1g69340.1 68414.m07956 appr-1-p processing enzyme family protein
contains Pfam domain PF01661: Appr-1-p processing enzyme
family
Length = 562
Score = 53.6 bits (123), Expect = 8e-08
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +2
Query: 293 ISERVSIFKGDITKLEIDAVVNAANSRLKAGGGVDGAIHRAAGPFLQAECDSIGGCPTG 469
I+ R+ +++G+ LE+DAVVN+ N L G +H AAGP L +C ++GGC TG
Sbjct: 83 INSRIYLWRGEPWNLEVDAVVNSTNENLDEAHSSPG-LHVAAGPGLAEQCATLGGCRTG 140
Score = 37.1 bits (82), Expect = 0.008
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 468 GDAKVTGGYNLPAKYIIHTVGPQ 536
G AKVT Y+LPA+ +IHTVGP+
Sbjct: 140 GMAKVTNAYDLPARRVIHTVGPK 162
>At5g01310.1 68418.m00043 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain, weak hit to PF01661: Appr-1-p
processing enzyme family
Length = 912
Score = 41.1 bits (92), Expect = 5e-04
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Frame = +2
Query: 263 IKINTEKNKSISERVSIFKGDITKLEIDA------VVNAANSRLK-AGGGVDGAIHRAAG 421
+K + S + F GDITKL + + NA N RLK GGGV+ AI +AAG
Sbjct: 510 VKAKASQKNIDSAKFFTFVGDITKLRSEGGLHCNVIANATNWRLKPGGGGVNAAIFKAAG 569
Query: 422 PFLQ 433
P L+
Sbjct: 570 PDLE 573
>At2g38090.1 68415.m04676 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 298
Score = 37.1 bits (82), Expect = 0.008
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = +2
Query: 44 IRCFSVATMVNSTKWEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDS 223
I S AT + ++ W ++NR K + EE +K + F D + D WS+ G
Sbjct: 5 IEVMSPATYLETSNWLFQENRGTKWTAEENKKFENALAFYDKDTPDRWSRVAAMLPG--- 61
Query: 224 KKSTTDDLKEFEKIK 268
K+ D +K++ +++
Sbjct: 62 -KTVGDVIKQYRELE 75
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 36.7 bits (81), Expect = 0.010
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +2
Query: 74 NSTKWEIEKNRILKLSLE-EKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLK 250
N K E+EKN+ + +L KRK K D + +N +K L +++ K++TTD +
Sbjct: 1448 NKQKQELEKNKKIHYTLNMTKRKYEKEKDELSKQN-QSLAKQLEEAKEEAGKRTTTDAVV 1506
Query: 251 EFEKIKINTEKNKSI 295
E + +K EK K I
Sbjct: 1507 E-QSVKEREEKEKRI 1520
>At4g32630.1 68417.m04645 hypothetical protein
Length = 531
Score = 31.9 bits (69), Expect = 0.29
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +2
Query: 68 MVNSTKW-EIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDD 244
++N +W ++ +++ + EE I+K DFI VD +Y + + K T+D
Sbjct: 66 VLNLYQWPSSQQTKLVHFAQEETSNIFKLRDFIRSVYVD--KRYSSSDKISQQKSDVTED 123
Query: 245 LKEFEKIKINTEKNKSISERVSIFKGDITK 334
+E +K + ++S+ S+ K DI +
Sbjct: 124 YRESKKTSAHVLGSRSLH---SVDKSDIER 150
>At3g03800.1 68416.m00390 syntaxin, putative (SYP131) similar to
SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related
protein At-Syr1) {Arabidopsis thaliana}
Length = 306
Score = 31.1 bits (67), Expect = 0.51
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +2
Query: 191 KYLNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIF-KGDITKLEIDAVVNAAN 367
K+LNK QG + + IK E++ R+S F KG I +L+ + + N
Sbjct: 54 KHLNKLQGAHEETKAVTKAPAMKSIKQRMERDVDEVGRISRFIKGKIEELDRENLENRTK 113
Query: 368 SRLKAGGGVD 397
G GVD
Sbjct: 114 PGCGKGTGVD 123
>At5g52280.1 68418.m06488 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 853
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/81 (27%), Positives = 42/81 (51%)
Frame = +2
Query: 95 EKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKIN 274
EK + L L +E K +++ L + + NK+ +K+ T+ +E E+ K
Sbjct: 585 EKCKRLSLEMESKLSEHENLTKKTLAEANNL-RLQNKTLEEMQEKTHTEITQEKEQRKHV 643
Query: 275 TEKNKSISERVSIFKGDITKL 337
EKNK++S +V + + ++ KL
Sbjct: 644 EEKNKALSMKVQMLESEVLKL 664
>At5g60590.2 68418.m07599 yrdC protein-related
Length = 288
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 35 LAQIRCFSVATMVNSTKWEIEKNRILKLSLEEKRKIYKS 151
++++RCFS+A +W ++K + L E + KS
Sbjct: 27 VSELRCFSIANQSRRLRWGLQKKMVWSLERAETCVVSKS 65
>At5g60590.1 68418.m07598 yrdC protein-related
Length = 164
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 35 LAQIRCFSVATMVNSTKWEIEKNRILKLSLEEKRKIYKS 151
++++RCFS+A +W ++K + L E + KS
Sbjct: 27 VSELRCFSIANQSRRLRWGLQKKMVWSLERAETCVVSKS 65
>At4g39520.1 68417.m05588 GTP-binding protein, putative similar to
SP|Q9Y295 Developmentally regulated GTP-binding protein
1 (DRG 1) {Homo sapiens}; contains Pfam profiles
PF02824: TGS domain, PF01018: GTP1/OBG family
Length = 369
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 245 LKEFEKIKINTEKNKSISERVSIFKGDITKLEIDAVVNAANSRLKAGGGVDG 400
+KE E T+KNK+ S + + K + KL D + K GGG G
Sbjct: 8 IKEIEDEMAKTQKNKATSHHLGLLKAKLAKLRRDLLAPPT----KGGGGGAG 55
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 29.1 bits (62), Expect = 2.0
Identities = 22/84 (26%), Positives = 36/84 (42%)
Frame = +2
Query: 95 EKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKIN 274
E+++ K EE + K D D+E ++ + K + KKS L + E K
Sbjct: 1096 EEDKKEKKKHEESKSRKKEEDKKDMEKLEDQNSNKKKEDKNEKKKSQHVKLVKKESDKKE 1155
Query: 275 TEKNKSISERVSIFKGDITKLEID 346
++N+ SE I K E+D
Sbjct: 1156 KKENEEKSETKEIESSKSQKNEVD 1179
>At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identical
to gi_3883126_gb_AAC77826
Length = 135
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = -3
Query: 468 PVGHPPIESHSACKKGPAARCMAPSTPPPAFSLELAAFTTASISSLVMSPLKIETRS 298
P PP+ + P A AP+TPPPA + A T S++ SP + T S
Sbjct: 34 PATPPPVATPPPVATPPPAATPAPATPPPA-ATPAPATTPPSVAP---SPADVPTAS 86
>At4g16210.1 68417.m02460 enoyl-CoA hydratase/isomerase family
protein similar to 3-hydroxybutyryl-CoA dehydratase
(Crotonase) from Clostridium acetobutylicum [SP|P52046],
FadB1x (enoyl-CoA hydratase) from Pseudomonas putida
[GI:13310130]; contains Pfam profile PF00378 enoyl-CoA
hydratase/isomerase family protein
Length = 265
Score = 28.7 bits (61), Expect = 2.7
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Frame = +2
Query: 197 LNKSQGIDSKKSTTD-DLKEFEKIKINTEKNKSISERV------SIFKGDITKLEIDAVV 355
L ++ +D K+ D D E ++ I T +S V S+FKGD+ E D VV
Sbjct: 33 LTRAMMVDLAKAFKDMDSDESVQVVIFTGSGRSFCSGVDLTAAESVFKGDVKDPETDPVV 92
Query: 356 NAANSRLKAGGGVDGAIHRAAGPFLQAECD 445
R G ++G AG L CD
Sbjct: 93 QMERLRKPIIGAING-FAITAGFELALACD 121
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 28.3 bits (60), Expect = 3.6
Identities = 19/84 (22%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +2
Query: 95 EKNRILKLSLEEKRKIYK-SSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKI 271
E+ +K ++E K ++ ++E+V+ ++ + + K+ ++ KE EK+K
Sbjct: 300 EEEEDVKKKIDENETPEKVDTESKEVESVEETTQEKEEEVKEEGKERVEEEEKEKEKVKE 359
Query: 272 NTEKNKSISERVSIFKGDITKLEI 343
+ +K K E KGD K ++
Sbjct: 360 DDQKEKVEEEEKEKVKGDEEKEKV 383
>At2g35630.1 68415.m04369 microtubule organization 1 protein (MOR1)
identical to microtubule organization 1 protein
GI:14317953 from [Arabidopsis thaliana]
Length = 1978
Score = 28.3 bits (60), Expect = 3.6
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = -3
Query: 462 GHPPIESHSACKKGPAARCMAPSTPPPAFSLELAAFTTASISSLVMSPLKIETRSEM 292
G +E ++A + P++ + STPPP+ SL L + S+SSL + PL + RS++
Sbjct: 1829 GLAQVEKNAAAGRTPSS--LPLSTPPPS-SLALPSPDIPSLSSLDVKPL-MNPRSDL 1881
>At5g17040.1 68418.m01997 UDP-glucoronosyl/UDP-glucosyl transferase
family protein similar to UDP glucose:flavonoid
3-o-glucosyltransferase GI:13620861 from [Vitis
vinifera]; contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 442
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/74 (24%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +2
Query: 47 RCFSVATMVNSTKWEIEKNRILKLSLEEKRKIYKSSDFIDLENVDP-WSKYLNKSQGIDS 223
R ++T ++S K + K + +S EK ++ + + + N+D +SK L++ G+
Sbjct: 138 RSLLISTQISSEKQSLSKETLGCISGMEKIRVKDTPEGVVFGNLDSVFSKMLHQ-MGLAL 196
Query: 224 KKSTTDDLKEFEKI 265
++TT + FE++
Sbjct: 197 PRATTVYMNSFEEL 210
>At3g18290.1 68416.m02326 zinc finger protein-related weak alignment
to Pfam profiles: PF00097 Zinc finger, C3HC4 type (RING
finger) (2 copies)
Length = 1254
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 86 WEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYL 199
W N+ +K +E RKI S DF DL D +Y+
Sbjct: 321 WHKSINKEMKEIADEARKIQLSGDFSDLSAFDERLQYI 358
>At1g65070.1 68414.m07377 DNA mismatch repair MutS family protein
contains Pfam profile PF00488: MutS domain V
Length = 857
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 167 LENVDPWSKYLNKSQGIDSKKSTTDDL-KEFEKIKINTEK 283
LEN W++ LN Q ++ K S L +E K+K+ K
Sbjct: 572 LENAHKWTEKLNPEQDVERKGSLFQSLMEERNKLKLQATK 611
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -3
Query: 471 LPVGHPPIESHSACKKGPAARCMAPSTPPPAFS 373
LPV PP S C P A + S PP F+
Sbjct: 548 LPVSQPPPTFQSTCPSQPPAASSSLSPLPPVFN 580
>At1g58050.1 68414.m06579 helicase domain-containing protein contains
similarity to SP|P24785 Dosage compensation regulator
(Male-less protein) (No action potential protein)
{Drosophila melanogaster}; contains Pfam profiles
PF04408: Helicase associated domain (HA2), PF00271:
Helicase conserved C-terminal domain
Length = 1417
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 409 PG-CRSLFTGRMRFYRRMSNREMPKLLVVTIYQLNISSTLLG 531
PG C SL+T R RF + M ++P++L V + +L + LLG
Sbjct: 1003 PGHCFSLYT-RHRFEKLMRPYQVPEMLRVPLVELCLHIKLLG 1043
>At5g60520.1 68418.m07589 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 338
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 386 GGVDGAIHRAAGPFLQAECDSIGGCPTGRCQSYWWLQFTS*IYHPH 523
G DG + LQ IG P GR + + W+Q S ++ H
Sbjct: 127 GNKDGNFAIVSDENLQINAHFIGTRPAGRTRDFTWVQAFSVMFDSH 172
>At4g32640.1 68417.m04646 sec23/sec24 transport protein-related
Length = 1069
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 453 PIESHSACKKGPAARCMAPSTPPPA 379
P+ SHS P APS PPPA
Sbjct: 238 PLGSHSLSGNPPLTPFTAPSMPPPA 262
>At2g21410.1 68415.m02548 vacuolar proton ATPase, putative similar
to vacuolar proton ATPase 100-kDa subunit from
Dictyostelium discoideum P|1384136|gb|AAB49621
Length = 821
Score = 27.1 bits (57), Expect = 8.3
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 212 GIDSKKSTTDDLKE-FEKIKINTEKNKSISERVSIFKGDITKLEIDAVVNAANSRLKAGG 388
G+D + + + + FE+ + K K+I +++ D+TK +V S + A
Sbjct: 299 GLDQRNILLETIGDKFEQWNLKIRKEKAIYHTLNMLSLDVTK---KCLVGEGWSPVFAAT 355
Query: 389 GVDGAIHRAA 418
+ A+HRAA
Sbjct: 356 EIQDALHRAA 365
>At1g58060.1 68414.m06580 helicase domain-containing protein contains
similarity to SP|P24785 Dosage compensation regulator
(Male-less protein) (No action potential protein)
{Drosophila melanogaster}; contains Pfam profiles
PF04408: Helicase associated domain (HA2), PF00271:
Helicase conserved C-terminal domain
Length = 1459
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 409 PG-CRSLFTGRMRFYRRMSNREMPKLLVVTIYQLNISSTLLG 531
PG C SL+T R RF + M ++P++L + + +L + LLG
Sbjct: 1036 PGICFSLYT-RYRFEKLMRPYQVPEMLRMPLVELCLQIKLLG 1076
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,834,694
Number of Sequences: 28952
Number of extensions: 238135
Number of successful extensions: 813
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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