Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10f19
         (585 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         26   1.0  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         26   1.0  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   4.2  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   5.5  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +1

Query: 559 HHQHPYHH 582
           HHQHP+HH
Sbjct: 94  HHQHPHHH 101


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +1

Query: 559 HHQHPYHH 582
           HHQHP+HH
Sbjct: 94  HHQHPHHH 101


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 559 HHQHPYHH 582
           HH HP+HH
Sbjct: 159 HHHHPHHH 166


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 559 HHQHPYHH 582
           HH HP+HH
Sbjct: 498 HHAHPHHH 505


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 484,915
Number of Sequences: 2352
Number of extensions: 8447
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)