Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10f19
         (585 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   0.96 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   5.1  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   5.1  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   6.7  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 87  HVTNATLQELQQTQLPSLTERMNQMISSLY 176
           H    +LQ L   Q P+L+E  +  ++S+Y
Sbjct: 355 HHQTQSLQHLHYRQPPTLSESYSSYVNSMY 384


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -1

Query: 453  KRGDSLSHSRMVLETPILDMHWR 385
            K  + L  + +++ TPI+D H++
Sbjct: 1387 KLNEYLDKADVIVNTPIMDAHFK 1409


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 272 SGLPTASFFHTTSSSIPTFNSIVF 343
           SGL   ++ +  S +IP  NS VF
Sbjct: 541 SGLSHGNWIYPASMTIPGSNSAVF 564


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 169 PCTIQLRNRSCQLRHQYQQTPRLH 240
           P T+Q   R  Q+R   ++TP  H
Sbjct: 164 PTTVQQLLRRAQIRRNERRTPDPH 187


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,598
Number of Sequences: 438
Number of extensions: 2191
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)