Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10f18
         (668 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2734|AAF57660.2| 1271|Drosophila melanogaster CG30122-P...    30   2.5  
AY058602-1|AAL13831.1| 1257|Drosophila melanogaster LD29335p pro...    28   10.0 
AE013599-965|AAF58877.2| 1877|Drosophila melanogaster CG30007-PA...    28   10.0 

>AE013599-2734|AAF57660.2| 1271|Drosophila melanogaster CG30122-PB
           protein.
          Length = 1271

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 4/155 (2%)
 Frame = +1

Query: 148 RQILTPSKAPMAIQAIKSAAEDTGRTMFAPEMIKSRRVIVPSQNMFEPIAVPREREIVPL 327
           R+  + S++P  +QA   AAE    T+   E  + + V  P     +P A P   +  P 
Sbjct: 59  RRTRSMSRSPSPVQAAPVAAEPVLDTLEEEEQPEDKTVPQPEPESEQPAAEPEPEQSEP- 117

Query: 328 SSIVPANDCPIRILANEIARAPIEVRVLPNEFPCDCQRTLTRPRVECQTQSVIPFEQY-- 501
               PA         N+      E +  P EF    +    +  +E    +V+P  +   
Sbjct: 118 EEAEPAAAVTEDTTVNQAVNE--ESQPEPEEFDEKSETDDKQETIEEAVPAVVPQNEVAD 175

Query: 502 -PVNEFYRSAPVVNYMSPQMYP-ERQPAGEPLSAH 600
            P+ E + +AP     +    P E +PA   ++ H
Sbjct: 176 EPMEEDHDAAPEEQEPTQTEEPVEEKPAESTVAEH 210


>AY058602-1|AAL13831.1| 1257|Drosophila melanogaster LD29335p
           protein.
          Length = 1257

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = +1

Query: 145 LRQILTPSKAPMAIQAIKSAAE---DTGRTMFAPEMIKSRRVIVPSQNMFEPIAVPRERE 315
           L++    SK+ M++   ++A E      RT  A E I S+ +   + + F+P   P +  
Sbjct: 290 LKESCLQSKSEMSLPVRRNALEILMKRKRTKVAKEAISSKPMTTQNTSQFQPEPFPEDAL 349

Query: 316 IVP 324
           +VP
Sbjct: 350 VVP 352


>AE013599-965|AAF58877.2| 1877|Drosophila melanogaster CG30007-PA,
            isoform A protein.
          Length = 1877

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = +1

Query: 145  LRQILTPSKAPMAIQAIKSAAE---DTGRTMFAPEMIKSRRVIVPSQNMFEPIAVPRERE 315
            L++    SK+ M++   ++A E      RT  A E I S+ +   + + F+P   P +  
Sbjct: 910  LKESCLQSKSEMSLPVRRNALEILMKRKRTKVAKEAISSKPMTTQNTSQFQPEPFPEDAL 969

Query: 316  IVP 324
            +VP
Sbjct: 970  VVP 972


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,641,392
Number of Sequences: 53049
Number of extensions: 755167
Number of successful extensions: 2548
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2543
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)