Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10f12
         (557 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.3  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   1.8  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   7.2  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   9.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 412  YYFQNVSSLETRLRKNHVFWCLDWC 338
            YY  N   L+ ++  N +FW  D C
Sbjct: 2252 YYLCNQGQLQLQVCPNGLFWNKDHC 2276


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +1

Query: 307 PSRSDDIGTQYTNPNTKRHGF 369
           P   DD      NP  K+H F
Sbjct: 218 PEEDDDSNIPQNNPKNKQHNF 238


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 298 ITCPSRSDDIGTQYTNPNTKRHGFFANE 381
           I C SR      Q +    ++HG+FA+E
Sbjct: 90  IDCTSRPKLQEPQPSQHCPRKHGYFAHE 117


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +3

Query: 273 SIQNGCSKDHLPESERRYRNSIHQSKHQKTWF 368
           +++NGC K    + E  ++   H   H+  W+
Sbjct: 65  TMKNGCVKCEQKQKEDVHKVFQHLMIHRPNWW 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,106
Number of Sequences: 336
Number of extensions: 2351
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)