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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10f12
         (557 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces ...    27   2.5  
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc...    26   3.3  
SPAC20G4.03c |hri1||eIF2 alpha kinase Hri1|Schizosaccharomyces p...    25   5.7  
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces...    25   5.7  
SPCC1494.09c |||sequence orphan|Schizosaccharomyces pombe|chr 3|...    25   5.7  
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar...    25   7.5  
SPCC736.06 |||aspartate-tRNA ligase|Schizosaccharomyces pombe|ch...    25   7.5  
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |...    25   10.0 
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce...    25   10.0 
SPAC869.07c |mel1||alpha-galactosidase |Schizosaccharomyces pomb...    25   10.0 
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom...    25   10.0 
SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14 |Schizo...    25   10.0 

>SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 485

 Score = 26.6 bits (56), Expect = 2.5
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
 Frame = -3

Query: 357 FGVWIGVLSSD-IVAPTRAGDLLSNH--FV*N*LNSS*APKEMLTL*APKQLTVPRVGLS 187
           F  WI V + + +  P  A DLLS +  FV + +++     ++L+     +L V     S
Sbjct: 192 FAPWIEVDARNALFNPDSADDLLSGNPDFVIDAIDNIQTKVDLLSYCYNHKLPVIA---S 248

Query: 186 TMNVCKSFKTRVRCDSVFVKKESNLNEQCLRRL 88
           T + CKS  TRV    +    E  L+    RRL
Sbjct: 249 TGSACKSDPTRVNIADISATSEDPLSRATRRRL 281


>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
            Abc2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1463

 Score = 26.2 bits (55), Expect = 3.3
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +2

Query: 101  HCSFKFDSFFTKTESHRTLVLKDLHTFIVLRPTLGTVSCLGA*RVNISL 247
            H + KFD +  +   +  LVL D+   I  +  +G V   GA +  ++L
Sbjct: 1221 HGAIKFDHYSVRYRENLPLVLNDISVNIKPQEKIGIVGRTGAGKSTLTL 1269


>SPAC20G4.03c |hri1||eIF2 alpha kinase Hri1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 704

 Score = 25.4 bits (53), Expect = 5.7
 Identities = 15/71 (21%), Positives = 32/71 (45%)
 Frame = +2

Query: 338 TPIQTPKDMVFSQTSLKTRNILKVVDLDRLKPEKNQQANGLTGVIHQGNNGVMPQGTVPT 517
           TP Q+ +  ++   SL+   I+     + L+P +N  A+ L  ++ +     +P  +   
Sbjct: 64  TPEQSKQMFLYVAHSLQNSGIIDFEFSEELEPIRNAYADSLHNLLSKAFRSTLPMSSTKD 123

Query: 518 ASFSEEYLKPE 550
           +  S  Y  P+
Sbjct: 124 SKKS-RYSSPD 133


>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 637

 Score = 25.4 bits (53), Expect = 5.7
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = +2

Query: 431 PEKNQQANGLTGVIHQGNNGVMPQGTVPTAS 523
           P    Q   +TG    G NG  P  T PT S
Sbjct: 519 PNPTNQKVSITGAAADGPNGSAPVDTTPTNS 549


>SPCC1494.09c |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 157

 Score = 25.4 bits (53), Expect = 5.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 432 GFKRSRSTTFKMFRVLRLVCEKTMSFG 352
           GF  S  TTFK+F +L  +C + +  G
Sbjct: 83  GFPASPETTFKVFSLLDSLCLRLIQSG 109


>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
           Pop2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 703

 Score = 25.0 bits (52), Expect = 7.5
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +1

Query: 334 QYTNPNTKRHGFFANESQDSKHFESSRPRSFKARK 438
           +Y NPN  R  F  N+     +F     R F  RK
Sbjct: 297 KYANPNLNRPPFLHNDQISDDYFPEIFKRHFLNRK 331


>SPCC736.06 |||aspartate-tRNA ligase|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 611

 Score = 25.0 bits (52), Expect = 7.5
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +1

Query: 115 VRFLFYKNGITSNSSFERLAYIHCTQAYSRD 207
           VR + +  GIT    F+ + Y H    Y  D
Sbjct: 275 VRLVSFAKGITLAKPFQHITYQHAIDKYGSD 305


>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 791

 Score = 24.6 bits (51), Expect = 10.0
 Identities = 16/70 (22%), Positives = 30/70 (42%)
 Frame = +2

Query: 338 TPIQTPKDMVFSQTSLKTRNILKVVDLDRLKPEKNQQANGLTGVIHQGNNGVMPQGTVPT 517
           TP+Q  KD  F++++ + +          LKP+   Q + +     + N  +      P 
Sbjct: 482 TPVQRRKDGKFAKSTKRKKQ-------KSLKPDTENQESSVKNKKAKSNVNLQYSPKTPI 534

Query: 518 ASFSEEYLKP 547
              ++E LKP
Sbjct: 535 CKINDETLKP 544


>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 522

 Score = 24.6 bits (51), Expect = 10.0
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 382 SQDSKHFESSRPRSFKARKEPTGERSNRSDSP 477
           S  S + ++ RP    A+ + T  R +RSDSP
Sbjct: 320 SFQSSYNDADRPFQVGAQTQSTPNRISRSDSP 351


>SPAC869.07c |mel1||alpha-galactosidase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 436

 Score = 24.6 bits (51), Expect = 10.0
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +2

Query: 257 EEFNQFYTKWLLKRSPARVGATISELN 337
           EE+   +T W + +SP  +G  +S ++
Sbjct: 279 EEYKTHFTMWAILKSPLILGNDVSSMS 305


>SPBC3F6.05 |rga1||GTPase activating protein
           Rga1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1150

 Score = 24.6 bits (51), Expect = 10.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 370 FANESQDSKHFESSRPRSFKARKEPTGERSNRSDSPR 480
           +AN   D +H +SSR R  KA    T   SN +++ +
Sbjct: 622 YANTLNDLRHLKSSRNR--KATSNETQSSSNSTETSK 656


>SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 566

 Score = 24.6 bits (51), Expect = 10.0
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 268 SILYKMVAQKITCPSRSDDIGTQYTNPNTKRHGFFAN 378
           S L K + +K+     +D +G+Q    + K H FF N
Sbjct: 451 SSLCKNLIRKLLVKDENDRLGSQAGAADVKLHPFFKN 487


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,169,311
Number of Sequences: 5004
Number of extensions: 41856
Number of successful extensions: 139
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 233995432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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