BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov10f12 (557 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces ... 27 2.5 SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 26 3.3 SPAC20G4.03c |hri1||eIF2 alpha kinase Hri1|Schizosaccharomyces p... 25 5.7 SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 25 5.7 SPCC1494.09c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 25 5.7 SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 25 7.5 SPCC736.06 |||aspartate-tRNA ligase|Schizosaccharomyces pombe|ch... 25 7.5 SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |... 25 10.0 SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce... 25 10.0 SPAC869.07c |mel1||alpha-galactosidase |Schizosaccharomyces pomb... 25 10.0 SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 25 10.0 SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14 |Schizo... 25 10.0 >SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces pombe|chr 1|||Manual Length = 485 Score = 26.6 bits (56), Expect = 2.5 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 3/93 (3%) Frame = -3 Query: 357 FGVWIGVLSSD-IVAPTRAGDLLSNH--FV*N*LNSS*APKEMLTL*APKQLTVPRVGLS 187 F WI V + + + P A DLLS + FV + +++ ++L+ +L V S Sbjct: 192 FAPWIEVDARNALFNPDSADDLLSGNPDFVIDAIDNIQTKVDLLSYCYNHKLPVIA---S 248 Query: 186 TMNVCKSFKTRVRCDSVFVKKESNLNEQCLRRL 88 T + CKS TRV + E L+ RRL Sbjct: 249 TGSACKSDPTRVNIADISATSEDPLSRATRRRL 281 >SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc2|Schizosaccharomyces pombe|chr 1|||Manual Length = 1463 Score = 26.2 bits (55), Expect = 3.3 Identities = 14/49 (28%), Positives = 24/49 (48%) Frame = +2 Query: 101 HCSFKFDSFFTKTESHRTLVLKDLHTFIVLRPTLGTVSCLGA*RVNISL 247 H + KFD + + + LVL D+ I + +G V GA + ++L Sbjct: 1221 HGAIKFDHYSVRYRENLPLVLNDISVNIKPQEKIGIVGRTGAGKSTLTL 1269 >SPAC20G4.03c |hri1||eIF2 alpha kinase Hri1|Schizosaccharomyces pombe|chr 1|||Manual Length = 704 Score = 25.4 bits (53), Expect = 5.7 Identities = 15/71 (21%), Positives = 32/71 (45%) Frame = +2 Query: 338 TPIQTPKDMVFSQTSLKTRNILKVVDLDRLKPEKNQQANGLTGVIHQGNNGVMPQGTVPT 517 TP Q+ + ++ SL+ I+ + L+P +N A+ L ++ + +P + Sbjct: 64 TPEQSKQMFLYVAHSLQNSGIIDFEFSEELEPIRNAYADSLHNLLSKAFRSTLPMSSTKD 123 Query: 518 ASFSEEYLKPE 550 + S Y P+ Sbjct: 124 SKKS-RYSSPD 133 >SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces pombe|chr 2|||Manual Length = 637 Score = 25.4 bits (53), Expect = 5.7 Identities = 12/31 (38%), Positives = 13/31 (41%) Frame = +2 Query: 431 PEKNQQANGLTGVIHQGNNGVMPQGTVPTAS 523 P Q +TG G NG P T PT S Sbjct: 519 PNPTNQKVSITGAAADGPNGSAPVDTTPTNS 549 >SPCC1494.09c |||sequence orphan|Schizosaccharomyces pombe|chr 3|||Manual Length = 157 Score = 25.4 bits (53), Expect = 5.7 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = -3 Query: 432 GFKRSRSTTFKMFRVLRLVCEKTMSFG 352 GF S TTFK+F +L +C + + G Sbjct: 83 GFPASPETTFKVFSLLDSLCLRLIQSG 109 >SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosaccharomyces pombe|chr 1|||Manual Length = 703 Score = 25.0 bits (52), Expect = 7.5 Identities = 12/35 (34%), Positives = 15/35 (42%) Frame = +1 Query: 334 QYTNPNTKRHGFFANESQDSKHFESSRPRSFKARK 438 +Y NPN R F N+ +F R F RK Sbjct: 297 KYANPNLNRPPFLHNDQISDDYFPEIFKRHFLNRK 331 >SPCC736.06 |||aspartate-tRNA ligase|Schizosaccharomyces pombe|chr 3|||Manual Length = 611 Score = 25.0 bits (52), Expect = 7.5 Identities = 10/31 (32%), Positives = 14/31 (45%) Frame = +1 Query: 115 VRFLFYKNGITSNSSFERLAYIHCTQAYSRD 207 VR + + GIT F+ + Y H Y D Sbjct: 275 VRLVSFAKGITLAKPFQHITYQHAIDKYGSD 305 >SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |Schizosaccharomyces pombe|chr 1|||Manual Length = 791 Score = 24.6 bits (51), Expect = 10.0 Identities = 16/70 (22%), Positives = 30/70 (42%) Frame = +2 Query: 338 TPIQTPKDMVFSQTSLKTRNILKVVDLDRLKPEKNQQANGLTGVIHQGNNGVMPQGTVPT 517 TP+Q KD F++++ + + LKP+ Q + + + N + P Sbjct: 482 TPVQRRKDGKFAKSTKRKKQ-------KSLKPDTENQESSVKNKKAKSNVNLQYSPKTPI 534 Query: 518 ASFSEEYLKP 547 ++E LKP Sbjct: 535 CKINDETLKP 544 >SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces pombe|chr 2|||Manual Length = 522 Score = 24.6 bits (51), Expect = 10.0 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +1 Query: 382 SQDSKHFESSRPRSFKARKEPTGERSNRSDSP 477 S S + ++ RP A+ + T R +RSDSP Sbjct: 320 SFQSSYNDADRPFQVGAQTQSTPNRISRSDSP 351 >SPAC869.07c |mel1||alpha-galactosidase |Schizosaccharomyces pombe|chr 1|||Manual Length = 436 Score = 24.6 bits (51), Expect = 10.0 Identities = 8/27 (29%), Positives = 16/27 (59%) Frame = +2 Query: 257 EEFNQFYTKWLLKRSPARVGATISELN 337 EE+ +T W + +SP +G +S ++ Sbjct: 279 EEYKTHFTMWAILKSPLILGNDVSSMS 305 >SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharomyces pombe|chr 2|||Manual Length = 1150 Score = 24.6 bits (51), Expect = 10.0 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +1 Query: 370 FANESQDSKHFESSRPRSFKARKEPTGERSNRSDSPR 480 +AN D +H +SSR R KA T SN +++ + Sbjct: 622 YANTLNDLRHLKSSRNR--KATSNETQSSSNSTETSK 656 >SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14 |Schizosaccharomyces pombe|chr 1|||Manual Length = 566 Score = 24.6 bits (51), Expect = 10.0 Identities = 12/37 (32%), Positives = 19/37 (51%) Frame = +1 Query: 268 SILYKMVAQKITCPSRSDDIGTQYTNPNTKRHGFFAN 378 S L K + +K+ +D +G+Q + K H FF N Sbjct: 451 SSLCKNLIRKLLVKDENDRLGSQAGAADVKLHPFFKN 487 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,169,311 Number of Sequences: 5004 Number of extensions: 41856 Number of successful extensions: 139 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 137 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 139 length of database: 2,362,478 effective HSP length: 69 effective length of database: 2,017,202 effective search space used: 233995432 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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