Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10f12
         (557 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   2.2  
EF588503-1|ABQ96738.1|  169|Anopheles gambiae transposase protein.     23   5.1  
EF519441-2|ABP73492.1|  164|Anopheles gambiae CTL4 protein.            23   9.0  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 245  LGAQEEFNQFYTKWLLKRSPARV 313
            LG+  +F+ F+T W    SPAR+
Sbjct: 1070 LGSLLDFHSFFTVWEQAPSPARM 1092


>EF588503-1|ABQ96738.1|  169|Anopheles gambiae transposase protein.
          Length = 169

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = -3

Query: 390 VLRLVCEKTMSFGVWIGVLSSDIVAPTR 307
           +L L+C++ + F + +  L+ + + PTR
Sbjct: 112 LLDLICKECLPFNLVVYTLNPNYIMPTR 139


>EF519441-2|ABP73492.1|  164|Anopheles gambiae CTL4 protein.
          Length = 164

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +1

Query: 280 KMVAQKI-TCPSRSDDIGTQYTNPNTKRHGFFA 375
           +M+ Q +  CP  +   G  YT PN + + F A
Sbjct: 19  EMITQNLCVCPCXNPRGGKLYTTPNLRLNWFDA 51


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,519
Number of Sequences: 2352
Number of extensions: 9315
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)