Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10f11
(437 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical pr... 65 2e-11
U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin iso... 61 4e-10
U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin pro... 56 1e-08
U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin pro... 56 1e-08
U30943-1|AAC47116.1| 192|Caenorhabditis elegans cyclophilin-1 p... 36 0.013
AL033512-4|CAA22075.1| 192|Caenorhabditis elegans Hypothetical ... 36 0.013
Z92822-6|CAB07303.1| 172|Caenorhabditis elegans Hypothetical pr... 33 0.091
Z66499-2|CAA91297.1| 183|Caenorhabditis elegans Hypothetical pr... 31 0.48
U34955-1|AAC47115.1| 183|Caenorhabditis elegans cyclophilin iso... 31 0.48
AL032663-1|CAA21760.1| 171|Caenorhabditis elegans Hypothetical ... 30 0.85
U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin fam... 28 3.4
U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin fam... 28 3.4
U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin iso... 28 3.4
U27559-1|AAC47125.1| 171|Caenorhabditis elegans cyclophilin pro... 28 3.4
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 27 6.0
AC006720-2|AAF60445.3| 262|Caenorhabditis elegans Hypothetical ... 27 6.0
Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical pr... 27 7.9
>Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical
protein F31C3.1 protein.
Length = 204
Score = 65.3 bits (152), Expect = 2e-11
Identities = 35/62 (56%), Positives = 41/62 (66%)
Frame = +3
Query: 249 MGTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPXTTE 428
M +L + +L A A+ D+ KGPKVT KV FDM+IG IG IVIGLFGKTVP T
Sbjct: 1 MKSLLVVAAVLAVGALAQGDDA-KGPKVTDKVYFDMEIGGKPIGRIVIGLFGKTVPKTAT 59
Query: 429 NF 434
NF
Sbjct: 60 NF 61
>U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin
isoform 5 protein.
Length = 204
Score = 60.9 bits (141), Expect = 4e-10
Identities = 29/39 (74%), Positives = 30/39 (76%)
Frame = +3
Query: 318 KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPXTTENF 434
KGPKVT KV FDM+IG IG IVIGLFGKTVP T NF
Sbjct: 23 KGPKVTDKVYFDMEIGGKPIGRIVIGLFGKTVPKTATNF 61
>U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin
protein.
Length = 201
Score = 56.0 bits (129), Expect = 1e-08
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Frame = +3
Query: 264 MALGILLFIAS--AKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPXTTENF 434
M+ +L F+ + A S E +GP+VT KV FDM+IG +G IVIGLFG+ VP T +NF
Sbjct: 1 MSRALLFFVLAILALSAEA-RGPRVTDKVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNF 58
>U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin
protein 6 protein.
Length = 201
Score = 56.0 bits (129), Expect = 1e-08
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Frame = +3
Query: 264 MALGILLFIAS--AKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPXTTENF 434
M+ +L F+ + A S E +GP+VT KV FDM+IG +G IVIGLFG+ VP T +NF
Sbjct: 1 MSRALLFFVLAILALSAEA-RGPRVTDKVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNF 58
>U30943-1|AAC47116.1| 192|Caenorhabditis elegans cyclophilin-1
protein.
Length = 192
Score = 35.9 bits (79), Expect = 0.013
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 339 KVSFDMKIGDDNIGTIVIGLFGKTVPXTTENF 434
KV FD+ IG++ G + + LF VP T ENF
Sbjct: 23 KVFFDVSIGEEPAGRVTMELFNDVVPKTAENF 54
>AL033512-4|CAA22075.1| 192|Caenorhabditis elegans Hypothetical
protein Y49A3A.5 protein.
Length = 192
Score = 35.9 bits (79), Expect = 0.013
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 339 KVSFDMKIGDDNIGTIVIGLFGKTVPXTTENF 434
KV FD+ IG++ G + + LF VP T ENF
Sbjct: 23 KVFFDVSIGEEPAGRVTMELFNDVVPKTAENF 54
>Z92822-6|CAB07303.1| 172|Caenorhabditis elegans Hypothetical
protein ZK520.5 protein.
Length = 172
Score = 33.1 bits (72), Expect = 0.091
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3
Query: 339 KVSFDMKIGDDNIGTIVIGLFGKTVPXTTENF 434
KV FD+ IG G IV+ L+ VP T ENF
Sbjct: 5 KVFFDITIGGKKGGRIVMELYNDIVPKTAENF 36
>Z66499-2|CAA91297.1| 183|Caenorhabditis elegans Hypothetical
protein T01B7.4 protein.
Length = 183
Score = 30.7 bits (66), Expect = 0.48
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +3
Query: 342 VSFDMKIGDDNIGTIVIGLFGKTVPXTTENF 434
V ++ G IGTIVI LF P T ENF
Sbjct: 19 VFLEVTAGGAPIGTIVIELFADVTPRTAENF 49
>U34955-1|AAC47115.1| 183|Caenorhabditis elegans cyclophilin
isoform 11 (CYP-11) protein.
Length = 183
Score = 30.7 bits (66), Expect = 0.48
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +3
Query: 342 VSFDMKIGDDNIGTIVIGLFGKTVPXTTENF 434
V ++ G IGTIVI LF P T ENF
Sbjct: 19 VFLEVTAGGAPIGTIVIELFADVTPRTAENF 49
>AL032663-1|CAA21760.1| 171|Caenorhabditis elegans Hypothetical
protein Y75B12B.2 protein.
Length = 171
Score = 29.9 bits (64), Expect = 0.85
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 339 KVSFDMKIGDDNIGTIVIGLFGKTVPXTTENF 434
+V FD+ I G IV+ L+ VP T ENF
Sbjct: 5 RVFFDITIAGKPTGRIVMELYNDIVPKTAENF 36
>U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin family
protein 8, isoformb protein.
Length = 447
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 312 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPXTTENF 434
+P + + FD+ I + G IV L+ P T ENF
Sbjct: 1 MPPEVRGNKRAFFDISINGEPAGRIVFSLWNHCCPRTVENF 41
>U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin family
protein 8, isoforma protein.
Length = 466
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 312 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPXTTENF 434
+P + + FD+ I + G IV L+ P T ENF
Sbjct: 1 MPPEVRGNKRAFFDISINGEPAGRIVFSLWNHCCPRTVENF 41
>U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin
isoform 8 protein.
Length = 466
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 312 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPXTTENF 434
+P + + FD+ I + G IV L+ P T ENF
Sbjct: 1 MPPEVRGNKRAFFDISINGEPAGRIVFSLWNHCCPRTVENF 41
>U27559-1|AAC47125.1| 171|Caenorhabditis elegans cyclophilin
protein.
Length = 171
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 339 KVSFDMKIGDDNIGTIVIGLFGKTVPXTTENF 434
+V FD+ G IV+ L+ VP T ENF
Sbjct: 5 RVFFDITTAGKPTGRIVMELYNDIVPKTAENF 36
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 27.1 bits (57), Expect = 6.0
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 339 KVSFDMKIGDDNIGTIVIGLFGKTVPXTTENF 434
+V +KIG IG IVI L P T ENF
Sbjct: 140 RVYLGVKIGIRYIGRIVIELRTDVTPKTAENF 171
>AC006720-2|AAF60445.3| 262|Caenorhabditis elegans Hypothetical
protein Y17G9B.4 protein.
Length = 262
Score = 27.1 bits (57), Expect = 6.0
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 342 VSFDMKIGDDNIGTIVIGLFGKTVPXTTENF 434
V + IG G IVI LF VP T +NF
Sbjct: 99 VFIHVSIGGIEEGCIVIQLFNDIVPRTAQNF 129
>Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical
protein R10E8.6 protein.
Length = 1696
Score = 26.6 bits (56), Expect = 7.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 263 CKGTHD*NEFSSFPCYFYKIRFECLFF 183
C+ + + FSS C FY I F+ + F
Sbjct: 224 CQPVEEISHFSSVSCIFYSINFDDMVF 250
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,850,992
Number of Sequences: 27780
Number of extensions: 172696
Number of successful extensions: 434
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 433
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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