Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10f10
         (627 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    26   0.35 
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   4.3  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   7.4  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   7.4  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   9.8  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = -1

Query: 525 INMPFITSKFSV*RFPNTP-GTDVNILIPA--SLMFGSCALAQVNMNCRNSGHWLLPS 361
           I+ P I+  F+   FP TP G +V ++     + +  +  + Q    C+  G W LPS
Sbjct: 189 ISCPEISVNFA--HFPATPTGREVALIEQTIGTCVANAVVIEQPTFLCKGDGKWYLPS 244


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 82  GRIQQHSNRNKSSAPSEFNSKCRHCRR 162
           G I+  + + K+  P EF  +C+  R+
Sbjct: 134 GNIEAVTTKEKAKFPQEFFPECKWSRK 160


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
          protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +2

Query: 8  GDQAQFYQLLNTLLSTDNDIRSQA 79
          G QAQ +   NT LS DN   S +
Sbjct: 17 GTQAQHWSRGNTWLSLDNSNMSMS 40


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
          protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +2

Query: 8  GDQAQFYQLLNTLLSTDNDIRSQA 79
          G QAQ +   NT LS DN   S +
Sbjct: 17 GTQAQHWSRGNTWLSLDNSNMSMS 40


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 363 MATTSGLSSYSSCLPVPVR 419
           +A    + S S C+P+PVR
Sbjct: 212 LAKLRNVHSSSFCIPLPVR 230


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,391
Number of Sequences: 438
Number of extensions: 3599
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)