Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10f08
         (613 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99171-3|CAB16310.1|  374|Caenorhabditis elegans Hypothetical pr...    31   0.86 
Z75526-5|CAA99771.1|  209|Caenorhabditis elegans Hypothetical pr...    30   1.1  
U97013-4|AAB52339.1|  968|Caenorhabditis elegans Alanyl trna syn...    28   6.0  
AL021447-1|CAA16269.1|  144|Caenorhabditis elegans Hypothetical ...    28   6.0  
AC006733-3|AAF60488.2|  372|Caenorhabditis elegans Hypothetical ...    27   8.0  

>Z99171-3|CAB16310.1|  374|Caenorhabditis elegans Hypothetical
           protein F47G4.3 protein.
          Length = 374

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 20/89 (22%), Positives = 39/89 (43%)
 Frame = +2

Query: 191 KFPEENYTSYIASSYVKDIEASGARVVPILIGKDRSYYKELMKKINGVLIPGGATFFNQS 370
           KF E  Y S +  +Y +    +   +     G++R   +  +K    + +        QS
Sbjct: 263 KFVEHFYPSSVGHTYFESCGVADL-ITTCYGGRNRKVAEAFIKSDKPLRVIEQELLKGQS 321

Query: 371 NGYADAGQHIYELAIELNDVGDYFPIFGT 457
                  Q +YE+ +E+N++ + FPIF +
Sbjct: 322 AQGPPTAQDVYEM-LEINEISEKFPIFAS 349


>Z75526-5|CAA99771.1|  209|Caenorhabditis elegans Hypothetical
           protein C06H2.5 protein.
          Length = 209

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = -3

Query: 236 HTKKQCSLCSSLQGIFHGGKTIVLEKVHRL*VCHLRPSTHCC 111
           HTK  C L  SL    H    IVL K   +   H+  +  CC
Sbjct: 94  HTKLLCELLDSLMTDLHQPAKIVLAKCQDVGAAHVNMNEKCC 135


>U97013-4|AAB52339.1|  968|Caenorhabditis elegans Alanyl trna
           synthetase protein 2 protein.
          Length = 968

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +2

Query: 347 GATFFNQSNGYADAGQHIYELAI--ELNDVGDYFPIFGTCLGFELLVILASGRG 502
           GA   +++N YA+ G  IY++ +  ++ND  + F +    +    +V++ S  G
Sbjct: 529 GAILLDRTNFYAEQGGQIYDVGVLTKVNDESNEFNVSNCQVRGGYIVLVGSAEG 582


>AL021447-1|CAA16269.1|  144|Caenorhabditis elegans Hypothetical
           protein F19B2.5 protein.
          Length = 144

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 4/105 (3%)
 Frame = +2

Query: 35  TVITMKSALLLLWLYVFHCEGAVIVDSNEYSVVN-DRPIIGVLSQEQSFY---LHGKFPE 202
           T  T+K+ +    L     E  +I D+  Y + N D      L Q  + Y   L G   +
Sbjct: 19  TFDTIKTLMNFQTLQKISFERIIIYDA--YPIDNTDTQRYKALRQLDATYRWVLTGNLLQ 76

Query: 203 ENYTSYIASSYVKDIEASGARVVPILIGKDRSYYKELMKKINGVL 337
           +N  +++      D +    ++ PIL GK      EL KKI  +L
Sbjct: 77  QNLANFLKLGEYGDDQLWDTQICPILEGKQCDEKTELSKKIENLL 121


>AC006733-3|AAF60488.2|  372|Caenorhabditis elegans Hypothetical
           protein Y32H12A.1 protein.
          Length = 372

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 15/32 (46%), Positives = 16/32 (50%)
 Frame = +3

Query: 156 YFLKNNRFTSMENSLKRTTQATLLLRMSKTLR 251
           YFL         N LKRTT +   LRM  TLR
Sbjct: 248 YFLAYCFRHKQNNDLKRTTMSMTTLRMHSTLR 279


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,337,154
Number of Sequences: 27780
Number of extensions: 308249
Number of successful extensions: 821
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)