Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10f06
         (555 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.2  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.2  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   9.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 519  FLKHLQFFVEKFSF 478
            F+KH+  F+EK++F
Sbjct: 1499 FIKHVLQFLEKWNF 1512


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/39 (20%), Positives = 18/39 (46%)
 Frame = +1

Query: 259 KKWLGIIINFRTT*RSCKIL*NVIQNLTKKSFINNLHIL 375
           K W+ +  ++      C +L   +  +   SF+NN + +
Sbjct: 262 KSWIALNDDYNRLCHLCFLLDEKLSYIILTSFLNNFYFI 300


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 88  YSEL*ILCTLSEHVNYFINITYLLST 11
           ++EL  LC ++  +  F N  ++LST
Sbjct: 218 HNELCNLCQVANSIYGFQNFLFVLST 243


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,088
Number of Sequences: 336
Number of extensions: 2773
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)