Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10f05
         (659 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48621-7|CAA88546.1|  770|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U37429-9|AAA79344.3|  796|Caenorhabditis elegans Hypothetical pr...    29   3.9  

>Z48621-7|CAA88546.1|  770|Caenorhabditis elegans Hypothetical
           protein R07B1.9 protein.
          Length = 770

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 48  WCRGTLDRNEVPYYKN 1
           WC  T+D N +P+YKN
Sbjct: 263 WCLKTVDNNAMPFYKN 278


>U37429-9|AAA79344.3|  796|Caenorhabditis elegans Hypothetical
           protein F09E5.5 protein.
          Length = 796

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = +3

Query: 33  VSHDTTHLFFNLSPIQDDPPYFY---PS*FAFDIDEVISLAKKI 155
           VSH+T   + NL P +D+  YFY   P+     + + ++LAK++
Sbjct: 407 VSHETHDWYKNLRPSEDNHGYFYTDLPNTVFGMLKDTVTLAKEV 450


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,758,824
Number of Sequences: 27780
Number of extensions: 228196
Number of successful extensions: 419
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 419
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)