Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10f04
(550 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 207 7e-55
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 124 7e-30
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 109 3e-25
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 108 5e-25
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 107 8e-25
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 97 1e-21
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 97 2e-21
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 94 1e-20
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 89 5e-19
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 84 1e-17
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 77 1e-15
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 77 2e-15
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 75 5e-15
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 48 1e-06
SPCC794.08 |||HEAT repeat protein, unknown biological role|Schiz... 30 0.26
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 27 1.4
SPAC27E2.02 |||IMPACT homolog|Schizosaccharomyces pombe|chr 1|||... 27 1.8
SPBC119.16c |||conserved fungal protein|Schizosaccharomyces pomb... 26 4.2
SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces ... 26 4.2
SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog Chs2|Schiz... 26 4.2
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 25 5.6
SPBC947.15c |||NADH dehydrogenase|Schizosaccharomyces pombe|chr ... 25 5.6
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 25 7.3
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 25 7.3
SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces p... 25 9.7
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 25 9.7
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 207 bits (506), Expect = 7e-55
Identities = 90/117 (76%), Positives = 103/117 (88%)
Frame = +2
Query: 185 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 364
MST ARRRLMRDFKR+Q+DPP GVS +P +N+M+WNAVI GP DTPFEDGTFKL + F
Sbjct: 1 MSTTARRRLMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFD 60
Query: 365 EEYPNKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPN 535
E+YPNKPP V+FVS MFHPNVYA+G +CLDIL NRWSPTYDV+AILTSIQSLL+DPN
Sbjct: 61 EQYPNKPPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLNDPN 117
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 124 bits (300), Expect = 7e-30
Identities = 52/114 (45%), Positives = 76/114 (66%)
Frame = +2
Query: 197 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 376
A +R+ R+ L +DPP+ S P +++ W A I GP D+P+ G F L+I F +YP
Sbjct: 2 ALKRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYP 61
Query: 377 NKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
KPP V F ++++HPN+ ++G ICLDIL ++WSP +S +L SI SLL+DPNP
Sbjct: 62 FKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNP 115
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 109 bits (261), Expect = 3e-25
Identities = 51/127 (40%), Positives = 76/127 (59%), Gaps = 14/127 (11%)
Frame = +2
Query: 197 ARRRLMRDFKRLQEDPPTGVSGAPT-DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEY 373
A RRLM+++K L E+ P G++ P+ +++ W+ +I GP TPFE G + T++F +Y
Sbjct: 6 ALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDY 65
Query: 374 PNKPPTVRFVSKMFHPNVYADGGICLDIL-------------XNRWSPTYDVSAILTSIQ 514
P PPT++F + FHPNVY DG +C+ IL RWSP V IL S+
Sbjct: 66 PLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVM 125
Query: 515 SLLSDPN 535
S+L++PN
Sbjct: 126 SMLAEPN 132
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 108 bits (260), Expect = 5e-25
Identities = 45/112 (40%), Positives = 69/112 (61%)
Frame = +2
Query: 203 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 382
+R++++ + L DPP G+ APT++N+ + + GP + +E G F L + +EYP
Sbjct: 5 KRIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMM 64
Query: 383 PPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
PP VRF++K++HPNV G ICL L WSP + +L SIQ+L+ PNP
Sbjct: 65 PPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNP 116
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 107 bits (258), Expect = 8e-25
Identities = 50/112 (44%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
Frame = +2
Query: 203 RRLMRDFKRLQEDPPTGVSGAP-TDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPN 379
+RL + L G+S P +D+N++ W I GP DT +E FK+++ F YP
Sbjct: 31 KRLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPY 90
Query: 380 KPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPN 535
PPT+ F S M+HPNV G ICLDIL ++WS Y+V IL S+QSLL +PN
Sbjct: 91 SPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLLGEPN 142
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 97.5 bits (232), Expect = 1e-21
Identities = 46/119 (38%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Frame = +2
Query: 185 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 364
MS RR+ ++ +Q+D G+ +++I + GP TP+E G F + IE
Sbjct: 1 MSDNRSRRIAKELADVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIP 60
Query: 365 EEYPNKPPTVRFVSKMFHPNVYAD-GGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
+YP +PP + F +K++HPNV + G ICLDIL ++WSP Y + + L S+QSLL P P
Sbjct: 61 IDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEP 119
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 97.1 bits (231), Expect = 2e-21
Identities = 50/124 (40%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Frame = +2
Query: 185 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNN-----IMIWNAVIFGPHDTPFEDGTFKL 349
MS+ + RL + K+ + D P G P ++ +M W I G T +E G +KL
Sbjct: 1 MSSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKL 60
Query: 350 TIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDILXNR--WSPTYDVSAILTSIQSLL 523
T+ F EEYP +PP RF +FHPNVY G +CL IL W P + IL IQ LL
Sbjct: 61 TMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLL 120
Query: 524 SDPN 535
DPN
Sbjct: 121 DDPN 124
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 94.3 bits (224), Expect = 1e-20
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 14/130 (10%)
Frame = +2
Query: 188 STPARRRLMRDFKRLQEDPPTGVS-GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 364
S+ + + L + K +Q++PP G S G D +I W +I GP DT +E G F T+ F
Sbjct: 3 SSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFP 62
Query: 365 EEYPNKPPTVRFVSKMFHPNVYADGGICLDIL-------------XNRWSPTYDVSAILT 505
++YP PP ++F ++++HPNV+ +G +C+ IL RW P + IL
Sbjct: 63 QDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILI 122
Query: 506 SIQSLLSDPN 535
S+ S+LS PN
Sbjct: 123 SVISMLSSPN 132
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 88.6 bits (210), Expect = 5e-19
Identities = 38/118 (32%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
Frame = +2
Query: 188 STPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTE 367
S + RRL +++ L+E P + D+N+ W GP D+ + G F +++F
Sbjct: 5 SPSSSRRLTKEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPL 64
Query: 368 EYPNKPPTVRFVSKMFHPNVYADGGICLDILXNR-WSPTYDVSAILTSIQSLLSDPNP 538
+YP +PPT+ F ++++HPN ++G +CL IL + + P+ + ++L I LL +PNP
Sbjct: 65 DYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNP 122
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 83.8 bits (198), Expect = 1e-17
Identities = 42/112 (37%), Positives = 66/112 (58%), Gaps = 3/112 (2%)
Frame = +2
Query: 203 RRLMRDFKRLQEDPPTGVS--GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 376
+RL +++ Q +G+ TD ++ W AVI GP +TP+E G + L I E YP
Sbjct: 6 KRLHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYP 65
Query: 377 NKPPTVRFVSKMFHPNV-YADGGICLDILXNRWSPTYDVSAILTSIQSLLSD 529
PP+V F +K+ HPN+ + +G +C+DIL WSP + + + +I SLLS+
Sbjct: 66 ISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQSACLAIISLLSN 117
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 77.4 bits (182), Expect = 1e-15
Identities = 37/115 (32%), Positives = 66/115 (57%)
Frame = +2
Query: 191 TPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEE 370
+PA+ R+ +D L E P T + P + + + I P + ++ G FK I+ +
Sbjct: 22 SPAQIRIQKDVTDL-EIPSTMSTSWPDPIKLNVLHLEI-RPDEGYYKGGKFKFRIQIDDN 79
Query: 371 YPNKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPN 535
YP+ PP V+ ++K++HPN+ +G +CL+IL W+P ++++IL +Q L PN
Sbjct: 80 YPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNLNSILVGLQFLFLSPN 134
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 76.6 bits (180), Expect = 2e-15
Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Frame = +2
Query: 188 STPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTE 367
S A +RLM+++ LQ++P V P NI+ W+ +I GP DTP+E G + T+ F
Sbjct: 3 SKGAYKRLMKEYLALQKNPVELVDAKPATENILEWHYIITGPPDTPYEGGQYHGTLIFPP 62
Query: 368 EYPNKPPTVRFV--SKMFHPNVYADGGICL---DILXNRWSPTYDVSAILTSIQSLLS 526
+YP KPP +R + S F N +CL D W+P++ VS IL + S ++
Sbjct: 63 DYPFKPPAIRMITPSGRFQTNT----RLCLSFSDFHPKSWNPSWMVSTILVGLVSFMT 116
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 75.4 bits (177), Expect = 5e-15
Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Frame = +2
Query: 185 MSTPARRRLMRD-FKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEF 361
MS+P RRR+ D K L D + ++N+ + GP +TP+ G +K+ +E
Sbjct: 1 MSSP-RRRIETDVMKLLMSDYEVTL----VNDNMQEFYVRFHGPSETPYSGGIWKVHVEL 55
Query: 362 TEEYPNKPPTVRFVSKMFHPNV-YADGGICLDILXNRWSPTYDVSAIL-TSIQSLLSDPN 535
EYP K P++ FV+++FHPN+ G +CLD++ WSP +D+ I + LL PN
Sbjct: 56 PSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPN 115
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 47.6 bits (108), Expect = 1e-06
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Frame = +2
Query: 272 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGIC- 448
D + WNA I GP + E+ + L I YP+ PP V FVS++ P V + G
Sbjct: 35 DITLSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVDGETGKVN 94
Query: 449 ---LDILXNRWSPTYDVSAILTSI-QSLLSDPNPKL 544
+D L W Y + +L + + + S N KL
Sbjct: 95 PHKIDCL-RHWKREYSMETVLLDLKKEMASSSNRKL 129
>SPCC794.08 |||HEAT repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 798
Score = 29.9 bits (64), Expect = 0.26
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 146 FLLLSWSNFDTVIQKLCITNVRIKWTFL 63
FL S NFDT+++K IT+ + W F+
Sbjct: 497 FLRPSLINFDTILRKSAITSFSVLWDFI 524
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 27.5 bits (58), Expect = 1.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 109 ITVSKLLQLKSRKISLCYNLGIENQ 183
++ SKL QLKS S+C N G+ Q
Sbjct: 1022 LSTSKLFQLKSEANSICINRGLLEQ 1046
>SPAC27E2.02 |||IMPACT homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 280
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 332 DGTFKLTIEFTEEYPNKPPTV 394
D + +L I+F +YPN PTV
Sbjct: 38 DSSVRLNIQFPLDYPNSAPTV 58
>SPBC119.16c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 443 ICLDILXNRWSPTYDVSAILTSIQSLLSD 529
+CL + P+++ SA TS+ +LSD
Sbjct: 57 LCLSVFSKLQHPSFERSAFFTSVGLILSD 85
>SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 11 LPCGRDD*IFMEFLDNDKEKSTLFVRS 91
+ C D I+ FLDN + T+F+++
Sbjct: 825 ITCNEDSHIWTNFLDNASQNKTIFLQN 851
>SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog
Chs2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 926
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -2
Query: 468 LFXRISRQIPPSA*TFG*NIFDTNRTVGGLFGYSSVNS 355
LF R ++ P++ FD + T+GG+ G +S+++
Sbjct: 396 LFVRNGARLGPTSIYHAWKAFDVDSTIGGMCGKTSIDT 433
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 405 DTNRTVGGLFGYSSVNSIVSL 343
D+ +VG +FG+SSV + VSL
Sbjct: 134 DSGNSVGEIFGHSSVVNAVSL 154
>SPBC947.15c |||NADH dehydrogenase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 551
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = +2
Query: 209 LMRDFKRLQEDPPTGVSGAPTDNNIMI---WNAV 301
L + +RL P G SG P N +++ W AV
Sbjct: 70 LFQSLRRLNNSSPKGKSGVPKKNIVVLGSGWGAV 103
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -1
Query: 352 CEFECSIFKWSIMRAKYHSIPDHNIVISWS 263
C FE ++SI + +HNI++ W+
Sbjct: 1629 CNFESDDIQYSIDVVYSRKLKEHNIILWWN 1658
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 25.0 bits (52), Expect = 7.3
Identities = 8/23 (34%), Positives = 18/23 (78%)
Frame = -3
Query: 125 NFDTVIQKLCITNVRIKWTFLCR 57
++DT++Q+ C+ ++ I +T LC+
Sbjct: 1336 HYDTLMQQNCLIDMLISFTELCK 1358
>SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 612
Score = 24.6 bits (51), Expect = 9.7
Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 1/80 (1%)
Frame = +2
Query: 311 PH-DTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYD 487
PH DT D +KL +T N +F SK + LD++ S ++
Sbjct: 459 PHFDTTLADPCYKLAESWTNSAKNSDDPSKFSSKDIENWSAGQKSLFLDVVYEAVSFPHN 518
Query: 488 VSAILTSIQSLLSDPNPKLS 547
+ + S N +LS
Sbjct: 519 YIKRMGDVYSFAESKNAELS 538
>SPBC1826.01c |mot1||TATA-binding protein associated factor
Mot1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1953
Score = 24.6 bits (51), Expect = 9.7
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 137 KVEKSHCVIT*VLKIKMSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIM-IWNAVIF 307
K++ ++CV+ IK AR +L + K L+ +SG P NN++ +W+ F
Sbjct: 1485 KIDWNYCVLDEGHVIKN---ARAKLTKAVKSLRSYHRLILSGTPIQNNVLELWSLFDF 1539
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,515,907
Number of Sequences: 5004
Number of extensions: 54823
Number of successful extensions: 151
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 144
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 227943826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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