Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10f04
(550 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 223 8e-59
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 223 8e-59
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 223 8e-59
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 213 5e-56
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 133 6e-32
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 133 8e-32
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 133 8e-32
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 132 2e-31
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 131 3e-31
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 131 3e-31
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 131 3e-31
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 131 3e-31
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 130 6e-31
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 130 6e-31
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 126 7e-30
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 126 1e-29
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 125 2e-29
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 122 2e-28
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 122 2e-28
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 112 1e-25
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 110 5e-25
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 107 5e-24
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 105 2e-23
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 104 3e-23
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 99 1e-21
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 98 3e-21
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 98 3e-21
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 96 1e-20
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 95 2e-20
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 95 4e-20
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 94 5e-20
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 94 6e-20
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 91 4e-19
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 91 6e-19
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 90 1e-18
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 89 2e-18
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 89 2e-18
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 87 6e-18
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 85 3e-17
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 83 1e-16
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 79 1e-15
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 79 3e-15
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 71 5e-13
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 71 7e-13
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 68 5e-12
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 67 8e-12
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 63 1e-10
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 62 2e-10
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 61 5e-10
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 55 4e-08
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 53 1e-07
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 53 1e-07
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 50 1e-06
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 49 2e-06
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 49 2e-06
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 46 2e-05
At3g60650.1 68416.m06786 expressed protein 32 0.22
At5g66750.1 68418.m08414 SNF2 domain-containing protein / helica... 29 1.5
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 28 4.7
At5g07570.1 68418.m00867 glycine/proline-rich protein contains s... 27 6.2
At1g60987.1 68414.m06866 expressed protein 27 6.2
At1g52310.1 68414.m05902 protein kinase family protein / C-type ... 27 6.2
At5g31685.1 68418.m03766 expressed protein ; expression supporte... 27 8.3
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 223 bits (544), Expect = 8e-59
Identities = 95/118 (80%), Positives = 110/118 (93%)
Frame = +2
Query: 185 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 364
MSTPAR+RLMRDFKRLQ+DPP G+SGAP DNNIM+WNAVIFGP DTP++ GTFKL+++F+
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 365 EEYPNKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
E+YPNKPPTVRFVS+MFHPN+YADG ICLDIL N+WSP YDV+AILTSIQSLL DPNP
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 118
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 223 bits (544), Expect = 8e-59
Identities = 95/118 (80%), Positives = 110/118 (93%)
Frame = +2
Query: 185 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 364
MSTPAR+RLMRDFKRLQ+DPP G+SGAP DNNIM+WNAVIFGP DTP++ GTFKL+++F+
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 365 EEYPNKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
E+YPNKPPTVRFVS+MFHPN+YADG ICLDIL N+WSP YDV+AILTSIQSLL DPNP
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 118
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 223 bits (544), Expect = 8e-59
Identities = 95/118 (80%), Positives = 110/118 (93%)
Frame = +2
Query: 185 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 364
MSTPAR+RLMRDFKRLQ+DPP G+SGAP DNNIM+WNAVIFGP DTP++ GTFKL+++F+
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 365 EEYPNKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
E+YPNKPPTVRFVS+MFHPN+YADG ICLDIL N+WSP YDV+AILTSIQSLL DPNP
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 118
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 213 bits (521), Expect = 5e-56
Identities = 91/118 (77%), Positives = 106/118 (89%)
Frame = +2
Query: 185 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 364
M+TPA++RLM DFKRLQ+DPP G+SGAP DNNIM WNA+IFGP DTP++ GTFKLT+ FT
Sbjct: 1 MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60
Query: 365 EEYPNKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
E+YPNKPP VRFVS+MFHPN+YADG ICLDIL N+WSP YDV+A+LTSIQSLL DPNP
Sbjct: 61 EDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNP 118
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 133 bits (322), Expect = 6e-32
Identities = 57/114 (50%), Positives = 77/114 (67%)
Frame = +2
Query: 197 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 376
A +R++++ K LQ+DPPT S P ++ W A I GP D+P+ G F +TI F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61
Query: 377 NKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
KPP V F +K+FHPNV ++G ICLDIL +WSP +S +L SI SLL+DPNP
Sbjct: 62 FKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 115
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 133 bits (321), Expect = 8e-32
Identities = 56/114 (49%), Positives = 77/114 (67%)
Frame = +2
Query: 197 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 376
A +R++++ K LQ+DPPT S P ++ W A I GP D+P+ G F +TI F +YP
Sbjct: 32 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 91
Query: 377 NKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
KPP V F +K+FHPN+ ++G ICLDIL +WSP +S +L SI SLL+DPNP
Sbjct: 92 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 145
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 133 bits (321), Expect = 8e-32
Identities = 56/114 (49%), Positives = 77/114 (67%)
Frame = +2
Query: 197 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 376
A +R++++ K LQ+DPPT S P ++ W A I GP D+P+ G F +TI F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61
Query: 377 NKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
KPP V F +K+FHPN+ ++G ICLDIL +WSP +S +L SI SLL+DPNP
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 115
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 132 bits (318), Expect = 2e-31
Identities = 55/114 (48%), Positives = 77/114 (67%)
Frame = +2
Query: 197 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 376
A RR++++ K LQ DPP S PT ++ W A I GP+++P+ G F + I F +YP
Sbjct: 2 ATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYP 61
Query: 377 NKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
KPP V F +K+FHPN+ ++G ICLDIL ++WSP +S +L SI SLL+DPNP
Sbjct: 62 FKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNP 115
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 131 bits (316), Expect = 3e-31
Identities = 55/114 (48%), Positives = 77/114 (67%)
Frame = +2
Query: 197 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 376
A +R++++ K LQ+DPPT S P ++ W A I GP ++P+ G F +TI F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61
Query: 377 NKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
KPP V F +K+FHPN+ ++G ICLDIL +WSP +S +L SI SLL+DPNP
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 115
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 131 bits (316), Expect = 3e-31
Identities = 55/114 (48%), Positives = 77/114 (67%)
Frame = +2
Query: 197 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 376
A +R++++ K LQ+DPPT S P ++ W A I GP ++P+ G F +TI F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61
Query: 377 NKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
KPP V F +K+FHPN+ ++G ICLDIL +WSP +S +L SI SLL+DPNP
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 115
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 131 bits (316), Expect = 3e-31
Identities = 55/114 (48%), Positives = 77/114 (67%)
Frame = +2
Query: 197 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 376
A +R++++ K LQ+DPPT S P ++ W A I GP ++P+ G F +TI F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 377 NKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
KPP V F +K+FHPN+ ++G ICLDIL +WSP +S +L SI SLL+DPNP
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 115
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 131 bits (316), Expect = 3e-31
Identities = 55/114 (48%), Positives = 77/114 (67%)
Frame = +2
Query: 197 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 376
A +R++++ K LQ+DPPT S P ++ W A I GP ++P+ G F +TI F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 377 NKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
KPP V F +K+FHPN+ ++G ICLDIL +WSP +S +L SI SLL+DPNP
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 115
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 130 bits (314), Expect = 6e-31
Identities = 56/114 (49%), Positives = 76/114 (66%)
Frame = +2
Query: 197 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 376
A +R+ ++ + LQ DPP S PT +++ W A I GP D+PF G F +TI F +YP
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYP 61
Query: 377 NKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
KPP V F +K++HPN+ ++G ICLDIL +WSP VS +L SI SLL+DPNP
Sbjct: 62 FKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNP 115
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 130 bits (314), Expect = 6e-31
Identities = 56/114 (49%), Positives = 76/114 (66%)
Frame = +2
Query: 197 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 376
A +R+ ++ + LQ DPP S PT +++ W A I GP D+PF G F +TI F +YP
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYP 61
Query: 377 NKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
KPP V F +K++HPN+ ++G ICLDIL +WSP VS +L SI SLL+DPNP
Sbjct: 62 FKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNP 115
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 126 bits (305), Expect = 7e-30
Identities = 52/114 (45%), Positives = 77/114 (67%)
Frame = +2
Query: 197 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 376
A +R++++ K LQ+DPP+ S P ++ W A I GP ++P+ G F ++I F +YP
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYP 61
Query: 377 NKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
KPP V F +K++HPN+ ++G ICLDIL +WSP +S +L SI SLL+DPNP
Sbjct: 62 FKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 115
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 126 bits (303), Expect = 1e-29
Identities = 54/115 (46%), Positives = 77/115 (66%), Gaps = 1/115 (0%)
Frame = +2
Query: 197 ARRRLMRDFKRLQEDPPTG-VSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEY 373
A +R++++ K LQ+DPPT + P ++ W A I GP ++P+ G F +TI F +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 61
Query: 374 PNKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
P KPP V F +K+FHPN+ ++G ICLDIL +WSP +S +L SI SLL+DPNP
Sbjct: 62 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 116
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 125 bits (301), Expect = 2e-29
Identities = 53/115 (46%), Positives = 75/115 (65%), Gaps = 1/115 (0%)
Frame = +2
Query: 197 ARRRLMRDFKRLQEDPPTGVSGAPT-DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEY 373
A +R+ R+ + +Q PP S P + +I W A I GPHD+P+ G F ++I+F+ +Y
Sbjct: 2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDY 61
Query: 374 PNKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
P KPP V F +K++HPN+ + G ICLDIL +WSP S +L SI SLL+DPNP
Sbjct: 62 PFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNP 116
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 122 bits (294), Expect = 2e-28
Identities = 51/112 (45%), Positives = 78/112 (69%)
Frame = +2
Query: 203 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 382
RR++++ +RL +P G+S +P+++N+ +N +I GP +P+E G FKL + EEYP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 383 PPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
P VRF++K++HPN+ G ICLDIL ++WSP + +L SIQ+LLS PNP
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 119
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 122 bits (293), Expect = 2e-28
Identities = 51/112 (45%), Positives = 77/112 (68%)
Frame = +2
Query: 203 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 382
RR++++ +RL +P G+S +P++ N+ +N +I GP +P+E G FKL + EEYP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 383 PPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
P VRF++K++HPN+ G ICLDIL ++WSP + +L SIQ+LLS PNP
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 119
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 112 bits (270), Expect = 1e-25
Identities = 46/106 (43%), Positives = 67/106 (63%)
Frame = +2
Query: 197 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 376
A +R++++ K LQ+DPPT S P ++ W A I GP ++P+ G F +TI F +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 377 NKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQ 514
KPP V F +K+FHPN+ ++G ICLDIL +WSP +S + Q
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVTLIFQ 107
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 110 bits (265), Expect = 5e-25
Identities = 51/111 (45%), Positives = 67/111 (60%)
Frame = +2
Query: 203 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 382
+RL + L G+S P ++NI W I G DT FE ++L++ F+ +YP K
Sbjct: 38 KRLQSELMGLMMGGGPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFK 97
Query: 383 PPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPN 535
PP V+F + FHPNV G ICLDIL ++WS YDV IL SIQSLL +PN
Sbjct: 98 PPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPN 148
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 107 bits (257), Expect = 5e-24
Identities = 50/111 (45%), Positives = 66/111 (59%)
Frame = +2
Query: 203 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 382
+RL + L G+S P ++NI W I G DT FE ++L++ F+ +YP K
Sbjct: 39 KRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFK 98
Query: 383 PPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPN 535
P V+F + FHPNV G ICLDIL ++WS YDV IL SIQSLL +PN
Sbjct: 99 SPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPN 149
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 105 bits (252), Expect = 2e-23
Identities = 43/105 (40%), Positives = 69/105 (65%)
Frame = +2
Query: 203 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 382
RR++++ +RL +P G+S +P+++N+ +N +I GP +P+E G FKL + EEYP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 383 PPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQS 517
P VRF++K++HPN+ G ICLDIL ++WSP + +L S
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLRYMS 112
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 104 bits (250), Expect = 3e-23
Identities = 48/117 (41%), Positives = 72/117 (61%), Gaps = 3/117 (2%)
Frame = +2
Query: 197 ARRRLMRDFKRLQEDPPTG--VSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEE 370
+R RL +++K +Q + + D NI W A+I GP +TP+E G F+L E
Sbjct: 4 SRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEP 63
Query: 371 YPNKPPTVRFVSKMFHPNV-YADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
YP +PP VRF++K+FHPNV + G ICLDIL N WSP + + ++ +I +L++ P P
Sbjct: 64 YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 99 bits (238), Expect = 1e-21
Identities = 47/119 (39%), Positives = 68/119 (57%)
Frame = +2
Query: 182 KMSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEF 361
KM A +R+ +++ + G NNI W AVI GP TP+E G F L+I+F
Sbjct: 4 KMDKKAAQRIAMEYRAMISKESLFSIGQ-NSNNIYEWTAVIRGPDGTPYEGGMFNLSIKF 62
Query: 362 TEEYPNKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
+YP KPP F + ++HPN+ +G IC++IL ++W+P V +L SI LL PNP
Sbjct: 63 PTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNP 121
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 98.3 bits (234), Expect = 3e-21
Identities = 53/131 (40%), Positives = 71/131 (54%), Gaps = 14/131 (10%)
Frame = +2
Query: 185 MSTPARRRLMRDFKRLQEDPPTGVS-GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEF 361
M++ A L + K L + P G S G + NI W+ I GP DT +E G F + F
Sbjct: 1 MNSQACLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSF 60
Query: 362 TEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL-------------XNRWSPTYDVSAIL 502
+ YPN PPTVRF S ++HPNVY DG +C+ IL RW+P + V +I+
Sbjct: 61 PQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIM 120
Query: 503 TSIQSLLSDPN 535
SI S+LS PN
Sbjct: 121 LSIISMLSGPN 131
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 98.3 bits (234), Expect = 3e-21
Identities = 42/83 (50%), Positives = 57/83 (68%)
Frame = +2
Query: 290 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDILXNR 469
+N +I GP +P+E G FKL + EEYP P VRF++K++HPN+ G ICLDIL ++
Sbjct: 4 FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK 63
Query: 470 WSPTYDVSAILTSIQSLLSDPNP 538
WSP + +L SIQ+LLS PNP
Sbjct: 64 WSPALQIRTVLLSIQALLSAPNP 86
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 96.3 bits (229), Expect = 1e-20
Identities = 50/121 (41%), Positives = 64/121 (52%), Gaps = 7/121 (5%)
Frame = +2
Query: 197 ARRRLMRDFKRLQEDPPTGVSGAPTDN-----NIMIWNAVIFGPHDTPFEDGTFKLTIEF 361
AR RL + K +++ P G P N+M+W+ I G T +E G F LT+ F
Sbjct: 6 ARGRLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLTMHF 65
Query: 362 TEEYPNKPPTVRFVSKMFHPNVYADGGICLDILXN--RWSPTYDVSAILTSIQSLLSDPN 535
+E+YP+KPP +F FHPNVY G +CL IL W P V IL IQ LL PN
Sbjct: 66 SEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVKQILVGIQDLLDTPN 125
Query: 536 P 538
P
Sbjct: 126 P 126
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 95.5 bits (227), Expect = 2e-20
Identities = 42/112 (37%), Positives = 64/112 (57%)
Frame = +2
Query: 203 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 382
+R+ R+ L DPP S P +N+ W A I GP TP+E G F L I F +YP K
Sbjct: 39 KRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFK 98
Query: 383 PPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
PP + F ++++H NV G + ++IL + WSP ++ +L +I+S+ P P
Sbjct: 99 PPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEP 150
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 94.7 bits (225), Expect = 4e-20
Identities = 50/123 (40%), Positives = 67/123 (54%), Gaps = 14/123 (11%)
Frame = +2
Query: 209 LMRDFKRLQEDPPTGVS-GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKP 385
L + K L + P G S G + N+ W+ I GP DT +E G F + F E YP P
Sbjct: 10 LQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSP 69
Query: 386 PTVRFVSKMFHPNVYADGGICLDIL-------------XNRWSPTYDVSAILTSIQSLLS 526
PTV F S+M+HPNVY+DG +C+ IL RW+P + V +I+ SI S+LS
Sbjct: 70 PTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLS 129
Query: 527 DPN 535
PN
Sbjct: 130 GPN 132
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 94.3 bits (224), Expect = 5e-20
Identities = 45/111 (40%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Frame = +2
Query: 212 MRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPT 391
++D +R Q+ +G+ P +N+ I GP TP+E GTF++ I + YP +PP
Sbjct: 11 LQDCERNQDS--SGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPK 68
Query: 392 VRFVSKMFHPNVYA-DGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNPK 541
++F +K++HPN+ + G ICLDIL ++WSP + L SIQ+LLS P PK
Sbjct: 69 MQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPK 119
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 93.9 bits (223), Expect = 6e-20
Identities = 51/131 (38%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Frame = +2
Query: 194 PARRRLMRDFKRLQEDPPTGVSGAPTDN----NIMIWNAVIFGPHDTPFEDGTFKLTIEF 361
P R+L F+ + P +S + NI W+ I GP DT +E G F + F
Sbjct: 33 PWLRKLAFSFRNNSKASPWNLSPYQNQSCDCYNIFEWSVTIIGPPDTLYEGGFFNAIMTF 92
Query: 362 TEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL-------------XNRWSPTYDVSAIL 502
+ YPN PPTVRF S M+HPNVY+DG +C+ IL RW+P + V +I+
Sbjct: 93 PQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIM 152
Query: 503 TSIQSLLSDPN 535
SI S+LS PN
Sbjct: 153 LSIISMLSGPN 163
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 91.1 bits (216), Expect = 4e-19
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 13/124 (10%)
Frame = +2
Query: 206 RLMRDFKRLQEDPPTGVS---------GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIE 358
R+ ++ K L DPP G S G+ + +A I GP DT + +G F L I+
Sbjct: 10 RMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQ 69
Query: 359 FTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL----XNRWSPTYDVSAILTSIQSLLS 526
E YP +PP V F + ++HPN+ G ICLDIL W P+ ++S +LTS++ LLS
Sbjct: 70 IPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLS 129
Query: 527 DPNP 538
+PNP
Sbjct: 130 EPNP 133
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 90.6 bits (215), Expect = 6e-19
Identities = 38/113 (33%), Positives = 69/113 (61%)
Frame = +2
Query: 203 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 382
++L ++ K L E PP G+ D + A I GP TP+E+G F++ + + ++P+
Sbjct: 13 KQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHS 72
Query: 383 PPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNPK 541
PP F++K+FHPNV ++G IC++ L W+P+ + +L+ ++ LL +P P+
Sbjct: 73 PPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFPE 125
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 89.8 bits (213), Expect = 1e-18
Identities = 43/117 (36%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
Frame = +2
Query: 185 MSTPARRRLMRDFKRLQEDPPTGV-SGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEF 361
+S A RL ++F+ + V S P+ NI W A + GP P+E G F +++
Sbjct: 26 VSKSAENRLWKEFQEKDDVLKIHVRSWLPSPENIFRWEATVNGPVGCPYEKGVFTVSVHI 85
Query: 362 TEEYPNKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDP 532
+YP +PP + F +K+FHPN+ G I +DIL +RWS ++ +L SI S+LS+P
Sbjct: 86 PPKYPYEPPKITFKTKIFHPNISEIGEIFVDILGSRWSSALTINLVLLSICSILSNP 142
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 89.0 bits (211), Expect = 2e-18
Identities = 46/120 (38%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Frame = +2
Query: 185 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 364
+S A RL ++ Q +PPTG TDN + W + G T + + T++L ++F
Sbjct: 12 LSKIATNRLQKELVEWQMNPPTGFKHKVTDN-LQRWIIEVIGAPGTLYANDTYQLQVDFP 70
Query: 365 EEYPNKPPTVRFVSKM-FHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNPK 541
E YP + P V F+ HP++Y++G ICLDIL + WSP VS+I SI S+LS K
Sbjct: 71 EHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTEK 130
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 89.0 bits (211), Expect = 2e-18
Identities = 47/120 (39%), Positives = 68/120 (56%), Gaps = 1/120 (0%)
Frame = +2
Query: 185 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 364
+S A RL ++ Q +PPTG TDN + W + G T + + T++L +EF
Sbjct: 12 LSKIACNRLQKELSEWQLNPPTGFRHKVTDN-LQKWTIDVTGAPGTLYANETYQLQVEFP 70
Query: 365 EEYPNKPPTVRFVSKM-FHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNPK 541
E YP + P V FVS HP++Y++G ICLDIL + WSP V+++ SI S+LS K
Sbjct: 71 EHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLSSSPAK 130
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 87.4 bits (207), Expect = 6e-18
Identities = 46/120 (38%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Frame = +2
Query: 185 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 364
+S A RL ++ Q +PPTG TDN + W + G T + + T+ L +EF
Sbjct: 12 LSKIACNRLQKELSEWQVNPPTGFKHRVTDN-LQKWVIEVTGAPGTLYANETYNLQVEFP 70
Query: 365 EEYPNKPPTVRFVSKM-FHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNPK 541
+ YP + P V FV HP++Y++G ICLDIL + WSP VS++ SI S+LS K
Sbjct: 71 QHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSPEK 130
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 85.0 bits (201), Expect = 3e-17
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Frame = +2
Query: 197 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 376
A RL ++F Q +PP+G +DN + W + G T + + T++L +EF E YP
Sbjct: 16 ATNRLQKEFMEWQTNPPSGFKHRVSDN-LQRWIIEVHGVPGTLYANETYQLQVEFPEHYP 74
Query: 377 NKPPTVRFVSKM-FHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNPK 541
+ P V F HP++Y++G ICLD+L + WSP +S+I SI S+LS + K
Sbjct: 75 MEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSMLSSSSVK 130
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 83.0 bits (196), Expect = 1e-16
Identities = 40/120 (33%), Positives = 69/120 (57%), Gaps = 2/120 (1%)
Frame = +2
Query: 185 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 364
M++P++RR M K + D ++++ ++ GP D+ ++ G +K+ +E
Sbjct: 1 MASPSKRREMDMMKLMMSDYKVDT----VNDDLQMFYVTFHGPTDSLYQGGVWKIKVELP 56
Query: 365 EEYPNKPPTVRFVSKMFHPNV-YADGGICLDILXNRWSPTYDVSAILTS-IQSLLSDPNP 538
E YP K P+V FV+K++HPNV + G +CLD++ WSP +D+ + S + LL PNP
Sbjct: 57 EAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNP 116
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 79.4 bits (187), Expect = 1e-15
Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
Frame = +2
Query: 185 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 364
MS+P++RR M K + D + ++ + + GP D+ +E G +K+ +E
Sbjct: 1 MSSPSKRREMDLMKLMMSDYKVEM----INDGMQEFFVEFSGPKDSIYEGGVWKIRVELP 56
Query: 365 EEYPNKPPTVRFVSKMFHPNV-YADGGICLDILXNRWSPTYD-VSAILTSIQSLLSDPNP 538
+ YP K P+V F++K++HPNV G +CLD++ WSP +D V+ T + LL PNP
Sbjct: 57 DAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNP 116
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 78.6 bits (185), Expect = 3e-15
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Frame = +2
Query: 185 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 364
MS+P++RR M K + D + +N GP D+ ++ G +K+ +E
Sbjct: 1 MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFN----GPKDSLYQGGVWKIRVELP 56
Query: 365 EEYPNKPPTVRFVSKMFHPNV-YADGGICLDILXNRWSPTYD-VSAILTSIQSLLSDPNP 538
+ YP K P+V F++K++HPNV G +CLD++ WSP +D V+ T + LL PNP
Sbjct: 57 DAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNP 116
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 70.9 bits (166), Expect = 5e-13
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Frame = +2
Query: 203 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 382
+RL ++++ L ++P + V P+ N+I+ W+ V+ G TPF G + I+F EYP K
Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYK 67
Query: 383 PPTVRFVSKMFHPNVYADGGICL---DILXNRWSPTYDVSAILTSIQSLLSDPNP 538
PP + + + ICL D W+P + VS+ILT + S + D +P
Sbjct: 68 PPGITMTTP--NGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 70.5 bits (165), Expect = 7e-13
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Frame = +2
Query: 203 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 382
+RL ++++ L ++P + V P+ N+I+ W+ V+ G TPF G + I+F EYP K
Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYK 67
Query: 383 PPTVRFVSKMFHPNVYADGGICL---DILXNRWSPTYDVSAILTSIQSLLSDPNP 538
PP + + + ICL D W+P + VS+ILT + S + D +P
Sbjct: 68 PPGITMTTP--NGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 67.7 bits (158), Expect = 5e-12
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Frame = +2
Query: 203 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 382
+++ D+K L+ D P +S ++ + + AVI G TP+ DG F I+F + YP+
Sbjct: 274 KKVQADWKILENDLPEAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSV 333
Query: 383 PPTVRFVS--KMFHPNVYADGGICLDIL-------XNRWSPTYD-VSAILTSIQSLLSDP 532
PP V + S +PN+Y G +CL +L +W P + +L SIQ+L+ +
Sbjct: 334 PPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAGSAREKWLPNESTMLQLLVSIQALILNE 393
Query: 533 NP 538
P
Sbjct: 394 KP 395
Score = 60.5 bits (140), Expect = 7e-10
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Frame = +2
Query: 209 LMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPP 388
+ +++K L ++ P + ++ I + AVI G TP+ DG F I+F + YP+ PP
Sbjct: 610 IQKEWKILDKNLPETIFVRACESRIDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPP 669
Query: 389 TVRFVS--KMFHPNVYADGGICLDIL-------XNRWSPTYD-VSAILTSIQSLLSDPNP 538
V + S +PN+Y G +CL ++ +W P + +L SIQ+L+ + P
Sbjct: 670 KVHYHSGGLRINPNLYKCGKVCLSLISTWTGKKREKWLPKESTMLQLLVSIQALILNEKP 729
Score = 49.6 bits (113), Expect = 1e-06
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +2
Query: 203 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 382
+++ ++K L ++ P + ++ + + AVI G TP+ DG F I+F + YP+
Sbjct: 920 KKVQDEWKILNQNLPETIFVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSV 979
Query: 383 PPTVRFVS--KMFHPNVYADGGICLDI 457
PP V + S +PN+Y G + + I
Sbjct: 980 PPNVYYHSGGLRINPNLYNCGKVLVSI 1006
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 66.9 bits (156), Expect = 8e-12
Identities = 30/119 (25%), Positives = 60/119 (50%)
Frame = +2
Query: 179 IKMSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIE 358
+K + RL +D L +S N++M + I P + + G F + +
Sbjct: 26 VKKQSAGELRLHKDISELNLPKSCKISFPNGKNDLMNFEVTI-KPDEGYYLSGNFVFSFQ 84
Query: 359 FTEEYPNKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPN 535
+ YP++ P V+ +K++HPN+ +G +CL+IL W P +++ ++ + L ++PN
Sbjct: 85 VSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPN 143
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 62.9 bits (146), Expect = 1e-10
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Frame = +2
Query: 194 PARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEY 373
PA +R++++ K +Q +P P + NI W I GP DT FE G + I+ +Y
Sbjct: 11 PAVKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADY 70
Query: 374 PNKPPTVRFVSKMFHPNVYADGGICLDIL---XNRWSPTYDV-SAILTSIQSLLSDPNPK 541
P KPP+ ++ + + ICL I W P++ V +A++ I + + PN
Sbjct: 71 PFKPPSFMLLTP--NGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFMPTSPNGA 128
Query: 542 L 544
L
Sbjct: 129 L 129
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 62.1 bits (144), Expect = 2e-10
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Frame = +2
Query: 203 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 382
+R+ +++ L++D P + ++ + + AVI G TP+ DG F I F + YP+
Sbjct: 335 KRIQDEWRILEKDLPEMIFVRAYESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPST 394
Query: 383 PPTVRFVS--KMFHPNVYADGGICLDIL-------XNRWSP-TYDVSAILTSIQSLLSDP 532
PP V + S +PN+Y G +CL +L +W P T + +L SIQ L+ +
Sbjct: 395 PPIVHYHSGGLRINPNLYNCGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGLILNQ 454
Query: 533 NP 538
P
Sbjct: 455 KP 456
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 60.9 bits (141), Expect = 5e-10
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Frame = +2
Query: 203 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 382
+++ +D+K LQ + P G+ ++ + + AVI G TP++DG F +YP+
Sbjct: 853 KKVDQDWKILQNNLPDGIFVRAYEDRMDLLRAVIVGAFGTPYQDGLFFFDFHLPSDYPSV 912
Query: 383 PPTVRFVSK--MFHPNVYADGGICLDIL-------XNRWSP-TYDVSAILTSIQSLLSDP 532
PP+ + S +PN+Y +G +CL +L W P + + +L S+Q L+ +
Sbjct: 913 PPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNS 972
Query: 533 NP 538
P
Sbjct: 973 KP 974
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 54.8 bits (126), Expect = 4e-08
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +2
Query: 203 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 382
+++ +++ L+ + P + + + + A + G TP+ DG F I +YP++
Sbjct: 665 KKVQQEWSNLEANLPNTIYVRVCEERMDLLRAALVGAPGTPYHDGLFFFDIMLPPQYPHE 724
Query: 383 PPTVRFVS--KMFHPNVYADGGICLDILXNRWS 475
PP V + S +PN+Y G +CL +L N WS
Sbjct: 725 PPMVHYHSGGMRLNPNLYESGRVCLSLL-NTWS 756
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 53.2 bits (122), Expect = 1e-07
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Frame = +2
Query: 182 KMSTPARRRLMRDFKRLQEDPPTG-VS-GAPTDNNIMI--WNAVIFGPHDTPFEDGTFKL 349
K+ P RL+ + +R ++ G VS G ++I++ W I GPH+T +E F+L
Sbjct: 7 KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQL 66
Query: 350 TIEFTEEYPNKPPTVRFVSKMFHPNVYADGGIC----LDILXNRWSPTYDVSAILTSI-Q 514
+ ++YP PPTVRF S++ V + G+ +L N W + + +L + +
Sbjct: 67 KLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSN-WRREFTMEDLLIQLKK 125
Query: 515 SLLSDPNPKLS 547
++S N KL+
Sbjct: 126 EMMSSQNRKLA 136
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 52.8 bits (121), Expect = 1e-07
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Frame = +2
Query: 194 PARRRLMRDFKRLQEDPPTGVSGAPTDNNIMI----WNAVIFGPHDTPFEDGTFKLTIEF 361
P RL+ + +R ++ G D+ I W I GPH+T E ++L +
Sbjct: 12 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFC 71
Query: 362 TEEYPNKPPTVRFVSKMFHPNVYADGGIC----LDILXNRWSPTYDVSAILTSI-QSLLS 526
++YP KPPTVRF S++ V D G+ +L N W Y + ILT + + + +
Sbjct: 72 DKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLAN-WQRQYTMEDILTQLKKEMAA 130
Query: 527 DPNPKL 544
N KL
Sbjct: 131 SHNRKL 136
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 49.6 bits (113), Expect = 1e-06
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Frame = +2
Query: 182 KMSTPARRRLMRDFKRLQEDPPTGVSGAPTDNN----IMIWNAVIFGPHDTPFEDGTFKL 349
K+ P RL+ + +R ++ G D+ + W I GP +T +E F+L
Sbjct: 7 KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQL 66
Query: 350 TIEFTEEYPNKPPTVRFVSKMFHPNVYADGGI---CLDILXNRWSPTYDVSAILTSI-QS 517
+ +EYP PPTVRF +++ V + G+ L + W Y + IL + +
Sbjct: 67 KLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDILVKLKKE 126
Query: 518 LLSDPNPKLS 547
+++ N KL+
Sbjct: 127 MMTSHNRKLA 136
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 49.2 bits (112), Expect = 2e-06
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 8/119 (6%)
Frame = +2
Query: 194 PARRRLMRDFKRLQEDPPTGVSGAPTDNNIMI----WNAVIFGPHDTPFEDGTFKLTIEF 361
P RL+ + +R ++ G D+ I W I GPH+T E ++L +
Sbjct: 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFC 72
Query: 362 TEEYPNKPPTVRFVSKMFHPNVYADGGIC----LDILXNRWSPTYDVSAILTSIQSLLS 526
++YP KPPTVRF S++ V + G+ +L N W Y + IL ++ +S
Sbjct: 73 DKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLAN-WQREYTMEDILVQLKKEMS 130
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 49.2 bits (112), Expect = 2e-06
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 10/127 (7%)
Frame = +2
Query: 194 PARRRLMRDFKRLQEDPPTGVSGAPTDNNIMI----WNAVIFGPHDTPFEDGT-FKLTIE 358
P RL+ + +R ++ G D+ I W I GPH+ +G ++L +
Sbjct: 12 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVTVHEGRIYQLKLF 71
Query: 359 FTEEYPNKPPTVRFVSKMFHPNVYADGGIC----LDILXNRWSPTYDVSAILTSI-QSLL 523
++YP KPPTVRF S++ V D G+ +L N W Y + ILT + + +
Sbjct: 72 CDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLAN-WQRQYTMEDILTQLKKEMA 130
Query: 524 SDPNPKL 544
+ N KL
Sbjct: 131 ASHNRKL 137
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 45.6 bits (103), Expect = 2e-05
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Frame = +2
Query: 194 PARRRLMRDFKRLQEDPPTGVSGAPTDNNIMI----WNAVIFGPHDTPFEDGT-FKLTIE 358
P RL+ + +R ++ G D+ I W I GPH+ +G ++L +
Sbjct: 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVTVHEGRIYQLKLF 72
Query: 359 FTEEYPNKPPTVRFVSKMFHPNVYADGGIC----LDILXNRWSPTYDVSAILTSIQSLLS 526
++YP KPPTVRF S++ V + G+ +L N W Y + IL ++ +S
Sbjct: 73 CDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLAN-WQREYTMEDILVQLKKEMS 131
>At3g60650.1 68416.m06786 expressed protein
Length = 107
Score = 32.3 bits (70), Expect = 0.22
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 406 KNVSSKCLRRWWNLPRYPXKQMES 477
K VSSK + R W +P+YP KQ +S
Sbjct: 62 KKVSSKRVSRTWKIPKYPKKQPKS 85
>At5g66750.1 68418.m08414 SNF2 domain-containing protein / helicase
domain-containing protein similar to
proliferation-associated SNF2-like protein [Homo
sapiens] GI:8980660; contains Pfam profiles PF00271:
Helicase conserved C-terminal domain, PF00176: SNF2
family N-terminal domain
Length = 764
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 206 RLMRDFKRLQEDPPTGVSGAPTDNNIM-IWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 382
+L+R+ K L+ D ++G P NN+ +W+ + F D F+ +F+E+ N+
Sbjct: 344 KLLRELKHLKMDNKLLLTGTPLQNNLSELWSLLNFILPDIFTSHDEFESWFDFSEKNKNE 403
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 27.9 bits (59), Expect = 4.7
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Frame = +2
Query: 311 PHDTP-FEDGT-FKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLD-ILXNRWSPT 481
PH+ P F+ GT FK + + YP PPT F++ ++ +YA GI N+
Sbjct: 10 PHNPPPFDLGTIFKPS---SNPYP--PPTGPFLNNQYNQQLYAPPGIAAQPSPVNQTQQD 64
Query: 482 YDVSAILTSI--QSLLSDPNPKLS 547
S+ T++ Q LS P P L+
Sbjct: 65 VSSSSSATNLQPQRTLSYPTPPLN 88
>At5g07570.1 68418.m00867 glycine/proline-rich protein contains
similarity to flagelliform silk protein [Nephila
clavipes] gi|7106224|gb|AAF36090
Length = 1504
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 391 CWGFIWIFFCKFYCEFE 341
CW W F C+FYC F+
Sbjct: 44 CWFQFW-FRCRFYCRFD 59
>At1g60987.1 68414.m06866 expressed protein
Length = 97
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 407 KMFHPNVYADGGI-CLDILXNRWSPTYDVSAILTSIQSLLSD 529
+MF N DG CLD+L + W P S LT + + SD
Sbjct: 44 QMFDTNCEVDGAKQCLDLLISTWDP----SVRLTRVSCICSD 81
>At1g52310.1 68414.m05902 protein kinase family protein / C-type
lectin domain-containing protein contains protein kinase
domain, Pfam:PF00069, PF00059 Lectin C-type domain
Length = 552
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 392 VRFVSKMFHPNVYADGGICLD 454
+R +K++HPNV A G C D
Sbjct: 313 IRRAAKLYHPNVVAIKGCCYD 333
>At5g31685.1 68418.m03766 expressed protein ; expression supported
by MPSS
Length = 519
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 136 KSRKISLCYNLGIENQNVNSSKKTPDEGF*TLTRGSTYRC 255
K++K+ N+ + N N P EGF TL G Y C
Sbjct: 147 KNKKVVRFGNVTLRVPNPNERVDDPPEGFLTLYEGFFYLC 186
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,787,071
Number of Sequences: 28952
Number of extensions: 274635
Number of successful extensions: 689
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -